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1 nzymatic activity in repair of abasic sites (AP endonuclease).
2 nts following incision of the abasic site by AP endonuclease.
3 ic/apyrimidinic (AP) site intermediate by an AP endonuclease.
4 turn corresponds to a decreased abundance of AP endonuclease.
5 the 5' side of the deoxyribose phosphate by AP endonuclease.
6 in from yeast and show that it is a class II AP endonuclease.
7 emove the 5' sugar-phosphate residue left by AP endonuclease.
8 notion that yeast contains only one major 5'-AP endonuclease.
9 itors of a critical DNA repair enzyme, human AP endonuclease.
10 ecognition of bistranded AP lesions by human AP endonuclease.
11 RP residues that remain after cleavage by 5'-AP endonuclease.
12 n of bistranded abasic site lesions by human AP endonuclease.
13 significantly stimulated by the presence of AP-endonuclease.
14 that are toxic if they are not processed by AP endonucleases.
15 homologous to the exonuclease III family of AP endonucleases.
16 critical elements in targeted recognition by AP endonucleases.
17 n/Escherichia coli exonuclease III family of AP endonucleases.
18 N-terminus show only low homology with other AP endonucleases.
19 new molecular insights into the evolution of AP endonucleases.
20 stored by addition of apurinic/apyrimidinic (AP) endonuclease.
21 d by reactive oxygen species are repaired by AP-endonucleases.
22 DG) and mitochondrial apurinic/apyrimidinic (AP) endonucleases.
23 ons is carried out by apurinic/apyrimidinic (AP) endonucleases.
24 ons and resembles the apurinic/apyrimidinic (AP) endonucleases.
25 uman tyrosyl-DNA phosphodiesterase 1 (TDP1), AP endonuclease 1 (APE1) and three-prime repair exonucle
26 their levels are regulated by repair enzymes AP endonuclease 1 (APE1) and tyrosyl-DNA phosphodiestera
27 erential oxidative deamination in vitro, and AP endonuclease 1 (APE1) can cleave the resulting ICL DN
30 dent and that this activity co-purifies with AP endonuclease 1 (APE1) over phosphocellulose and gel f
32 , we further provide the first evidence that AP endonuclease 1 (APE1) prevented TNR expansions via it
33 ystallographic studies reveal loops in human AP endonuclease 1 (APE1) that interact with the major an
34 e is less efficiently incised by recombinant AP endonuclease 1 (APE1) when the DNA backbone is facing
35 The follow-on base excision repair enzyme, AP endonuclease 1 (APE1), stimulates the turnover of TDG
38 at the appropriate time in development when AP endonuclease 1 (Apex), the upstream protein in BER, i
41 5'-flanking T:G mispair; this reduces OGG1, AP endonuclease 1, and DNA polymerase beta activities.
43 sic site that was subsequently 5'-incised by AP endonuclease 1, introducing a single-strand breakage
44 P site with either endonuclease III or human AP endonuclease 1, strongly inhibit excision of 8-oxoG b
45 s to AP sites inhibits the activity of human AP endonuclease 1, which is as a valid anticancer drug t
48 erexpression of human apurinic/apyrimidinic (AP) endonuclease 1 (APE1/Ref-1), a key enzyme in the DNA
49 glycosylase 1 (OGG1), apurinic/apyrimidinic (AP) endonuclease 1, DNA polymerase beta, and DNA ligases
50 ubstrate specificity, lack of stimulation by AP-endonuclease 1 (APE1) and anomalous DNA binding confo
56 the base excision repair (BER) endonuclease AP-endonuclease 1 (APE1) recognizes and cleaves DNA dama
58 tect both uracil DNA N-glycosylase (UNG) and AP-endonuclease 1 (APE1) within few nanograms of nuclear
61 re particles using the known repair enzymes, AP-endonuclease 1, DNA polymerase beta and DNA ligase II
63 se excision repair (homologs of XPF, XPC and AP-endonuclease-1), and repair of double-stranded DNA br
65 ision repair protein, Apurinic/apyrimidinic (AP) endonuclease 2 (APE2, APN2, or APEX2), is required f
67 air enzyme whose nuclease activities include AP-endonuclease, 3'-exonuclease, 3'-phosphodiesterase an
68 omology to the gene encoding the major human AP endonuclease, a component of the highly conserved DNA
72 tivity of an E.coli mutant deficient for the AP endonuclease activities associated with exonuclease I
74 g on a double-flap substrate, which prevents AP endonuclease activity and endonuclease-induced double
76 etabolism, decreases the efficiency of human AP endonuclease activity and that this effect is mostly
77 ver, glutathione-agarose was able to deplete AP endonuclease activity from GST-PO fusion protein prep
80 uced with Ape1/ref-1 exhibited 2-fold higher AP endonuclease activity in the oligonucleotide cleavage
81 hin NExo that is responsible for its lack of AP endonuclease activity is also important for its 3'-ph
82 n interactions of Ape1, we conclude that the AP endonuclease activity is essential for cellular viabi
85 tion of Asp-210 by Asn or Ala eliminates the AP endonuclease activity of HAP1, while substitution by
87 titution of alanine for Asn212 abolished the AP endonuclease activity of purified recombinant HAP1 pr
88 of the carboxyl terminus does not affect the AP endonuclease activity of the protein, but this protei
90 nylated APE1 displayed significantly reduced AP endonuclease activity on abasic-site-containing oligo
91 the base excision repair pathway, exhibiting AP endonuclease activity that incises the DNA backbone 5
93 As a means of confirming that the source of AP endonuclease activity was in fact due to PO, glutathi
94 were generally not altered in rho(0) cells, AP endonuclease activity was substantially reduced in nu
96 P1 and Ref-1) accounts for >95% of the total AP endonuclease activity, and is essential for the prote
97 ly been shown to be independent of Apn1-like AP endonuclease activity, and the main reason for the MM
107 -independent class II apurinic/apyrimidinic (AP) endonuclease activity and represents greater than 90
109 Ape1 is the major apurinic/apyrimidinic (AP) endonuclease activity in mammalian cells, and a key
113 me initiating repair of AP sites is the Ape1 AP endonuclease (also called Apex or Hap1), which also f
114 ave weak dRP lyase activity and to stimulate AP endonuclease and FEN1 activities on BER substrates.
116 al lysates with pure uracil DNA glycosylase, AP endonuclease and/or the catalytic subunit of polymera
117 oli strain defective for the major 5'-acting AP endonucleases and the fusions purified using glutathi
118 NA glycosylase (UDG), apurinic/apyrimidinic (AP) endonuclease and DNA ligase I, pol iota can use its
119 e1 is the major human apurinic/apyrimidinic (AP) endonuclease and initiates repair of abasic sites by
121 sms are equipped with apurinic/apyrimidinic (AP) endonucleases and 3'-nucleases that initiate repair.
122 apyrimidinic endonuclease (APE1) having both AP-endonuclease and 3' to 5' exonuclease (exo) DNA cleav
124 revealed that the expression of RecA, SmnA (AP endonuclease), and Nth (endonuclease) were down-regul
127 s ability to interact directly both with the AP endonuclease (APE) and with DNA polymerase beta (pol
128 sed on studies in Escherichia coli, in which AP endonuclease (APE) removes all 3' blocking groups (in
129 sites in DNA is through the participation of AP endonuclease (APE), which initiates the removal of ba
135 We examined substrate binding by the human AP endonuclease, Ape protein (also called Hap1, Apex or
142 4 as an N-terminally truncated form of human AP endonuclease (Ape1) lacking residues 1-35 (delta35-Ap
145 the presence of a comparable amount of human AP endonuclease (APE1) the specific activity of OGG1 was
146 ntaining duplex is a substrate for the human AP endonuclease (APE1), an enzyme that cleaves an apurin
147 t repairs AP sites in mammalian cells is the AP endonuclease (APE1), which functions through the base
148 using murine homolog of MutY (Myh) and human AP endonuclease (Ape1), which shares 94% amino acid iden
153 hosphodeoxyribose (dRP) moiety, generated by AP-endonuclease (APE1), is removed by the lyase activity
159 epair and between the apurinic/apyrimidinic (AP) endonuclease, Ape1, and the 8-oxoguanine DNA glycosy
160 B and the major human apurinic/apyrimidinic (AP) endonuclease, APE1, physically and functionally inte
161 It has been demonstrated that the minor AP endonuclease APE2 contains only one Zf-GRF motif medi
163 myces cerevisiae, the apurinic/apyrimidinic (AP) endonucleases Apn1 and Apn2 act as alternative pathw
164 g, Nth, and NTH1) and apurinic/apyrimidinic (AP) endonucleases (Apn1, APE1, and Nfo), the analysis of
165 oth cases, expression of the unrelated yeast AP endonuclease, Apn1, largely restored resistance.
170 ation of oxidized bases must be processed by AP endonucleases before they compromise cell integrity.
171 ing" of the AP site-containing DNA strand by AP endonuclease, beta-pol performs DNA synthesis prior t
174 the first to demonstrate the inducibility of AP-endonuclease by a human class I carcinogen associated
175 OGG1's activity in vitro in the presence of AP-endonuclease by reducing its affinity for the abasic
178 ses caused a 7- to 18-fold mutator effect in AP endonuclease-deficient (deltaapn1) yeast, which depen
187 hese data suggest that following incision by AP endonuclease, DNA Pol beta recognizes and binds to th
189 sion repair pathway (uracil DNA glycosylase, AP endonuclease, DNA polymerase beta, and an NAD+-depend
191 the lysate contained uracil DNA glycosylase, AP endonuclease, DNA polymerase, flap endonuclease, and
192 ER proteins required for PCNA-dependent BER (AP endonuclease, DNA polymerases delta, beta and DNA lig
193 that is slower than the respective rates of AP endonuclease, DNA synthesis, and ligation, suggesting
194 III, lambda exonuclease, RNase H, RNase HII, AP endonuclease, duplex-specific nuclease, DNase I, or T
198 mutans expresses an inducible, class II-like AP endonuclease, encoded by the smx gene, that exhibits
201 re we report that the apurinic/apyrimidinic (AP) endonucleases--Escherichia coli Xth and human APE1--
203 studies are described using Escherichia coli AP endonucleases, exonuclease III and endonuclease IV.
204 bacterial Nfo represent the two conserved 5' AP endonuclease families in the biosphere; they both rec
205 ain homologous to the apurinic/apyrimidinic (AP) endonuclease family and shows nicking in vitro with
206 etype for a conserved apurinic/apyrimidinic (AP) endonuclease family that primes DNA repair synthesis
207 iled structural and biochemical study of the AP endonuclease from Neisseria meningitidis that has all
209 an E.coli mutant lacking the major 5'-acting AP endonucleases from sensitivity to an alkylating agent
217 ant frequencies in spermatogenic cell types, AP endonuclease heterozygous (Apex(+/-)) knockout mice w
218 at human uracil-DNA glycosylase 1 (UNG1) and AP endonuclease I (APE1) have optimal activities at spec
227 ues are eliminated by apurinic/apyrimidinic (AP) endonucleases in the nucleotide incision repair path
228 permutating B cells, whereas APE1, the major AP-endonuclease in faithful base excision repair, does n
229 he DNA repair enzyme, apurinic/apyrimidinic (AP)-endonuclease, in isolated mesothelial cells, the pro
231 Smx is likely the primary, if not the sole, AP endonuclease induced during growth at low pH values.
232 3' side following incision at its 5' side by AP endonuclease is a prerequisite to completion of these
233 ial phosphorylation sites, recombinant human AP endonuclease is weakly phosphorylated in vitro (4% at
234 is property of the exonuclease III family of AP endonucleases is remarkably conserved from Archaea to
236 intercalated TXNA-DNA adducts are incised by AP endonuclease less efficiently than those formed by 7m
238 5 and 2.5 microg/cm2 significantly increased AP-endonuclease mRNA and protein levels as well as enzym
239 g BER in single and multiple glycosylase and AP-endonuclease mutants confirmed that Mag1 is the major
241 s in DNA repair: one is a typical Neisserial AP endonuclease (NApe), whereas the other is a specialis
243 processing of these noncoding lesions by the AP endonucleases Nfo, ExoA, and Nth contribute to the pr
246 nic endodeoxyribonuclease 1 (APE1), the main AP-endonuclease of the DNA base excision repair pathway,
248 and characterised two apurinic/apyrimidinic (AP) endonuclease paralogues in the human pathogen Neisse
249 ocess of damaged bases, apurinic-apyrimidic (AP) endonucleases play an essential role in enabling the
251 reviously, we showed that when the zebrafish AP endonuclease protein (ZAP1) level is knocked down, em
252 ble-nucleotide flipping and sharp bending by AP endonucleases provide exquisite damage specificity wh
253 e of action used by both human and bacterial AP endonucleases raises important questions regarding th
254 The magnesium dependence of steady-state AP endonuclease reactions was sigmoidal for both wild-ty
258 f AP sites with six purified human proteins: AP endonuclease, replication factor C, PCNA, flap endonu
259 he AP site has been previously 5'-incised by AP endonuclease, resulting in a 5' 2-deoxyribose 5-phosp
260 irectly test whether a genetic diminution of AP endonuclease results in increased spontaneous mutant
261 omer of the carbocyclic abasic site by human AP endonuclease showed that the enzyme recognizes both c
262 sion of the S. mutans apurinic/apyrimidinic (AP) endonuclease, Smx, in Escherichia coli; initial char
263 inic/apyrimidinic (AP) sites is initiated by AP endonucleases, such as the human Ape1 protein (also c
266 the incision of DNA at an abasic site by an AP endonuclease, they all lack the ability for the subse
268 itochondrial class II apurinic/apyrimidinic (AP) endonuclease to cleave the DNA backbone on the 5' si
269 ycosylase activity by apurinic/apyrimidinic (AP) endonuclease using murine homolog of MutY (Myh) and
270 nfocal scanning laser microscopy showed that AP-endonuclease was primarily localized in the nucleus b
271 ifunctional glycosylase/AP lyases as well as AP endonuclease, were significantly higher in cerebellar
273 : oxidative Polbeta-DPC depended on the Ape1 AP endonuclease, which generates the Polbeta lyase subst
274 by repair initiated by 'class II' apurinic (AP) endonucleases, which cleave immediately 5'to abasic