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1 ASO binding also induces the formation of a dimer of dim
2 ASO length and chemical modification influenced the effi
3 ASO therapeutics are chemically modified and include pho
4 ASO treatment led to decreased Abeta pathology and impro
5 ASO treatment results in long-term improvement in CFTR a
6 ASO treatment was tested in a conditional mouse model wi
7 ASO was administered by intracerebroventricular injectio
8 ASOs also induced exon skipping in cell lines derived fr
9 ASOs are small synthetic single-stranded chains of nucle
10 ASOs are typically 15-25 nt long and considered to be hi
11 ASOs can reduce the levels of mutant proteins by breakin
13 cleavage of hepatic VEGF using either MMP-9 ASO or intraportal MMP inhibitor in 5-week and 10-week H
15 difficult to reduce with RNase H1 activating ASOs and some ASOs display a shorter duration of activit
16 ioavailability of intrathecally administered ASOs.FUNDINGSMA Foundation, SMART, NIH (R01-NS096770, R0
18 illustrated by recent findings that altering ASO chemical modifications dramatically improves therape
19 JCI, Klein et al. showed that conjugating an ASO with an arginine-rich cell-penetrating peptide, Pip6
26 o different antisense oligonucleotide-based (ASO-based) therapies are currently in clinical use to tr
27 n human and rodent neurons, CGG RAN-blocking ASOs suppressed repeat toxicity and prolonged survival.
31 a potent and selective therapeutic KRAS cEt-ASO currently under clinical development for the treatme
34 s novel insights into the trafficking of cEt-ASOs and mechanisms that may determine their cellular fa
35 intracellular uptake and trafficking of cEt-ASOs leading to successful target knockdown are highly c
36 and determined the influence of ASO charge, ASO length, peptide charge, linker chemistry and ligand
40 Administration of palmitic acid-conjugated ASO (Palm-ASO) in mice results in a rapid and substantia
43 strate that the activity of lipid conjugated ASO was reduced in two mouse models with defects in endo
45 ontrast, palmitate and tocopherol-conjugated ASOs showed enhanced potency in the skeletal muscle of r
46 ntracerebroventricular Ncald-ASO3 or control-ASO injection were presymptomatically administered in a
47 ter ASOs, combining two ASOs, and delivering ASOs by free uptake also reduced off-target activity.
48 the muscle will be beneficial for developing ASO therapeutics targeting genes expressed in the muscle
51 hat can be used in the gap-region to enhance ASO safety and provide insights into understanding the b
52 amidate oligomer (PMO) dramatically enhanced ASO delivery into striated muscles of DM1 mice following
55 ma proteins by lipid-conjugation facilitates ASO transport across endothelial barriers into tissue in
56 -CON) or ASO specific for prothrombin (FII) (ASO-FII) to yield mFFP or ASO-CON mFFP or ASO-FII mFFP.
59 ino acids that are specifically required for ASO binding interactions, and by substitution of abasic
60 se and broaden the therapeutic landscape for ASOs in the treatment of other diseases using a similar
68 g the cellular uptake and activity of gapmer ASOs in sortilin expressing cells (sixfold) and in spina
69 can enhance the potency and safety of gapmer ASOs modified with high-affinity constrained Ethyl (cEt)
71 urprisingly, TLR8 potentiation by the gapmer ASOs was blunted by locked nucleic acid (LNA) and 2'-met
74 , clustering of microglia revealed that IDOL-ASO treatment shifted the composition of the microglia p
77 utophagy-related trafficking participates in ASO uptake or whether modulation of autophagy affects AS
82 ing binding to plasma proteins can influence ASO activity and distribution to extra-hepatic tissues i
88 be reversed by a single dose of PrP-lowering ASO administered after the detection of pathological cha
90 ructure of the DNA-binding domain of a model ASO-binding protein PC4, in complex with a full PS 2'-OM
91 t also helps explain why some fully modified ASOs cause RNA target to be reduced despite being unable
92 rget events caused by the uniformly modified ASOs tested in this study were significantly reduced wit
93 However, whether or not splice-modulating ASOs also induce hybridization-dependent mis-splicing of
94 ed the in vitro effects of splice-modulating ASOs on 108 potential off-targets predicted on the basis
95 tion also improved the potency of morpholino ASO designed to correct splicing of survival motor neuro
97 tified Ncald-ASO3-out of 450 developed Ncald ASOs-as the most efficient and non-toxic ASO for the CNS
98 ucleotides (ASO), we synthesized neurotensin-ASO conjugates and evaluated their cellular uptake and a
99 In Western diet (WD)-fed female mice, NNMT-ASO-KD reduced body weight, fat mass, and insulin level
104 indicated that the administration of Notch2 ASOs ameliorates the cancellous osteopenia of Notch2(tm1
106 n reporter system which allows us to observe ASO/protein interactions in real time in live cells, we
109 romising future regarding the application of ASO-based therapies for polyQ disorders in humans, offer
110 are difficult to predict, and the choice of ASO chemistry influences the extent of off-target activi
112 with good productive uptake, distribution of ASO was perinuclear and in those with poor productive up
114 RNA associated with chromatin, the effect of ASO-directed RNA degradation on transcription has never
115 ue exposure in mice and reduces excretion of ASO in urine, histological review of skeletal and cardia
116 eting have resulted in a newer generation of ASO drugs that are more potent and better tolerated than
117 Here we examine in detail the impact of ASO backbone chemistry, 2'-modifications, and buffer env
118 e conjugates and determined the influence of ASO charge, ASO length, peptide charge, linker chemistry
120 Over the years, chemical optimization of ASO molecules has allowed significant improvement of the
122 a proteins also facilitates the transport of ASO from the interstitium to the lymph and back into cir
123 albumin binding will facilitate traversal of ASO from the blood compartment to the interstitium of th
124 Our findings demonstrate the utility of ASO-based reading-frame correction as an approach to tre
125 h have been shown to enhance the affinity of ASOs for proteins, suggesting that localization of these
126 imitation for more widespread application of ASOs relates to relatively poor tissue penetration.
129 hese results demonstrate that the effects of ASOs on transcription must be considered for appropriate
131 hagy activation enhanced the localization of ASOs into autophagosomes without altering intracellular
135 an improved alternative for quantitation of ASOs and metabolites in plasma and tissue samples, showi
139 treatment with an antisense oligonucleotide (ASO) (ISIS 486178) targeted to a non-CUG sequence within
140 ted SMA patients, antisense oligonucleotide (ASO) concentration and full-length (exon 7 including) SM
141 re we describe an antisense oligonucleotide (ASO) directed against human HK2 (HK2-ASO1), which suppre
143 identification of antisense oligonucleotide (ASO) impurities using a Q-Exactive mass spectrometer.
144 ctional uptake of antisense oligonucleotide (ASO) in the muscle will be beneficial for developing ASO
145 splice-switching antisense oligonucleotide (ASO) into the amniotic cavity immediately surrounding th
147 inistration of an antisense oligonucleotide (ASO) targeting mTORC2's defining component Rictor specif
148 y, nusinersen, an antisense oligonucleotide (ASO) that corrects SMN2 splicing and thereby increases f
149 treated using an antisense oligonucleotide (ASO) that induces exon skipping to restore the open read
150 .5668 G > T using antisense oligonucleotide (ASO) therapy leads to restoration of CEP290 protein expr
151 y, we utilized an antisense oligonucleotide (ASO) to reduce IDOL expression therapeutically in the br
152 Conjugation of antisense oligonucleotide (ASO) with a variety of distinct lipophilic moieties like
153 ranscript with an antisense oligonucleotide (ASO) would delay seizure onset and prolong survival in a
155 ently showed that antisense oligonucleotide (ASO)-mediated PrP suppression extends survival and delay
156 ehicle or control antisense oligonucleotide (ASO-CON) or ASO specific for prothrombin (FII) (ASO-FII)
157 ration of Notch2 antisense oligonucleotides (ASO) down-regulates Notch2 and the Notch target genes He
158 einase 9 (MMP-9) antisense oligonucleotides (ASO) or an MMP inhibitor were used to induce liver-selec
159 uctive uptake of antisense oligonucleotides (ASO), we synthesized neurotensin-ASO conjugates and eval
161 l (2'OMe) gapmer antisense oligonucleotides (ASOs) can have opposing activities on Toll-Like Receptor
162 demonstrate that antisense oligonucleotides (ASOs) can reduce mRNA levels by acting through the no-go
163 e performance of antisense oligonucleotides (ASOs) has been a subject of debate for over two decades.
165 Splice-switching antisense oligonucleotides (ASOs) have emerged as an effective therapeutic strategy
167 ailable for DMD, antisense oligonucleotides (ASOs) mediated exon skipping is a promising therapeutic
169 impact of Apoc3 antisense oligonucleotides (ASOs) on lipoprotein metabolism and atherosclerosis in a
170 llular uptake of antisense oligonucleotides (ASOs) proceeds through the endocytic pathway; however, o
174 ogies, including antisense oligonucleotides (ASOs), siRNAs, RNA-targeting clustered regularly intersp
176 Splice-switching antisense oligonucleotides (ASOs), which bind specific RNA-target sequences and modu
180 ors like Tmprss6-antisense oligonucleotides [ASOs]) or increase erythropoiesis (by erythropoietin [EP
183 ence, sugar modifications, and PS content on ASO interactions with several abundant human plasma prot
184 influence of PS ASO protein interactions on ASO performance, and the structure activity relationship
187 ntrol antisense oligonucleotide (ASO-CON) or ASO specific for prothrombin (FII) (ASO-FII) to yield mF
191 sed on analysis of data from two overlapping ASO sequences, we conclude that off-target effects are d
192 ration of palmitic acid-conjugated ASO (Palm-ASO) in mice results in a rapid and substantial accumula
193 potency relative to the stereorandom parent ASO or improved safety over the 2'-OMe gap-modified ster
196 ity can modulate RNase H1 cleavage patterns, ASO sequence and design are the primary drivers which de
199 n aid in the design of safer and more potent ASO drugs, as illustrated by recent findings that alteri
203 which PS ASOs interact, the influence of PS ASO protein interactions on ASO performance, and the str
205 ummarize recent progress in understanding PS ASO protein interactions, highlighting the proteins with
207 nally, plasma proteins capable of binding PS ASOs in human plasma were confirmed by employing affinit
210 ar forces that govern the interactions of PS ASOs with cellular proteins and provide a potential mode
211 g palmitate, tocopherol or cholesterol to PS ASOs and their effects on plasma protein binding and on
212 ons, highlighting the proteins with which PS ASOs interact, the influence of PS ASO protein interacti
216 Reduction of M6PR levels also decreased PS-ASO activity in mouse cells and in livers of mice treate
218 cellular levels of GCC2 or M6PR impaired PS-ASO release from endosomes and decreased PS-ASO activity
219 proteins to nucleoli is an early event in PS-ASO toxicity, followed by nucleolar stress, p53 activati
221 act through the same pathway to influence PS-ASO activity, with GCC2 action preceding that of M6PR.
222 To better understand the chemistry of PS-ASO interactions, we have focused on human positive cofa
223 osphorothioate antisense oligonucleotide (PS-ASO) interactions with proteins has revealed that protei
224 highly influenced by the chemistry of the PS-ASO binding environment, however little correlation betw
230 ew avenues for the medicinal chemistry of PS-ASOs and research on all elements of the molecular pharm
237 sphorothioate antisense oligonucleotides (PS-ASOs) from late endosomes (LEs) is a rate-limiting step
238 oate-modified antisense oligonucleotides (PS-ASOs) interact with a host of plasma, cell-surface and i
240 In addition, we have determined that PS-ASOs bind P54nrb via RRM1 and RRM2, while they bind RNas
241 s, we have determined that safe and toxic PS-ASOs associate with these proteins with kinetics and imp
244 n as immunotherapies, and show that rational ASO selection can be used to prevent unintended immune s
248 al study, a single subcutaneous low-dose SMN-ASO and a single intracerebroventricular Ncald-ASO3 or c
251 educe with RNase H1 activating ASOs and some ASOs display a shorter duration of activity than the pro
253 methods to enhance autophagy and subsequent ASO activity using translatable approaches such as fasti
255 cations can be effective as splice-switching ASOs in the context of SMA and potentially other disease
257 ent of neonatal mice with an exon 5-targeted ASO-induced robust exon skipping for more than a year, i
259 ASOs and, to a lesser extent, exon-targeted ASOs cause RNA polymerase II (Pol II) transcription term
263 proof-of-principle data that gene-targeting ASOs can be selected to synergize with TLR8 agonists cur
264 vious findings with additional PrP-targeting ASOs, and demonstrate therapeutic benefit against four a
267 Our data also shows for the first time that ASOs may be a viable option for treating cardiac patholo
268 uence, chemical nature, and structure of the ASO can have profound influences on the interaction of P
269 binds the 5'-terminal 2'-OMe PS flank of the ASO, while the other interface binds the regular PS DNA
270 f the plasma-protein binding profiles of the ASO-conjugates by size-exclusion chromatography revealed
273 Following binding to the targeted RNA, the ASO perturbs RNA function by promoting selective degrada
285 Targeting Tmprss6 messenger RNA by Tmprss6-ASO was proven to be effective in improving IE and splen
287 roved the anemia, the combination of Tmprss6-ASO + EPO or Tmprss6-ASO + Tfr2 single-allele deletion p
289 combination of Tmprss6-ASO + EPO or Tmprss6-ASO + Tfr2 single-allele deletion produced significantly
290 ald ASOs-as the most efficient and non-toxic ASO for the CNS, by applying a stepwise screening strate
291 ically replaced anionic PS-linkages in toxic ASOs with charge-neutral alkylphosphonate linkages.
292 rthermore, using shorter ASOs, combining two ASOs, and delivering ASOs by free uptake also reduced of
295 chanism by which mRNAs can be degraded using ASOs, adding a new antisense approach to modulation of g
296 d highest binding affinity was observed with ASO conjugates containing fatty acid chain length from 1
301 The co-localization of M6PR and of GCC2 with ASOs is influenced by the PS modifications, which have b