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1 B. fragilis 9343 expresses at least three capsular polys
2 B. fragilis enterotoxin did not affect enterocyte viabil
3 B. fragilis enterotoxin was associated with HT-29 cell r
4 B. fragilis lacking PSA is unable to restrain T helper 1
5 B. fragilis OxyR and Dps proteins showed high identity t
6 B. fragilis was anergistic (antagonistic) to E. coli in
7 B. fragilis, as well as purified capsular polysaccharide
8 B. fragilis, which by itself is immunogenic, did not pro
9 97.3%) Actinomyces strains, 42 of 46 (91.3%) B. fragilis group strains, 79 of 103 (76.7%) Clostridium
11 analysis of the PS A biosynthesis loci of 50 B. fragilis isolates indicates that regions flanking eac
14 mylase indicates that amino acid residue 90 (B. fragilis numbering) plays an important role in confer
16 ributes to sepsis in mice, and we identify a B. fragilis protease called fragipain (Fpn) that is requ
18 NAc as the sole carbon source, we isolated a B. fragilis mutant strain that can grow on this substrat
20 assimilation and metabolism in the anaerobe B. fragilis have diverged from those of aerobic and facu
23 lence of F. nucleatum among 19 countries and B. fragilis among 10 countries were indicated to be 38.9
25 a scan of the Flavobacterium johnsoniae and B. fragilis genomes for putative promoters, resulting in
26 bolic pathways for C. difficile WT, luxS and B. fragilis upon co-culture, indicating that AI-2 may be
27 olonized with a healthy human microbiota and B. fragilis, induction of colitis caused a decline of PS
29 is study, the prevalence of F. nucleatum and B. fragilis among CRC patients has been assessed worldwi
32 ay an altered serum metabolomic profile, and B. fragilis modulates levels of several metabolites.
35 nds exemplified by 11, discovered earlier as B. fragilis metallo-beta-lactamase inhibitors, was selec
36 aling that Tn5520 mobilizes plasmids in both B. fragilis and Escherichia coli at high frequency and a
37 ction or commensalism, induction of IL-10 by B. fragilis is critical to this microbe's interactions w
38 Whether the virulence mechanisms employed by B. fragilis during infections differ from those employed
41 zation of the gnotobiotic mouse intestine by B. fragilis requires that the organism synthesize only a
42 ite that is increased by MIA and restored by B. fragilis causes certain behavioral abnormalities, sug
43 udy, we demonstrate that BfUbb lyses certain B. fragilis strains by non-covalently binding and inacti
45 ize microbial biogeography within the colon, B. fragilis penetrates the colonic mucus and resides dee
46 nted indicate that during aerobic conditions B. fragilis NrdAB may have a role in maintaining deoxyri
47 imulation and survival in vivo Consequently, B. fragilis acquires essential heme from host tissues du
50 he immunomodulatory activities of PSA during B. fragilis colonization include correcting systemic T c
55 ated with diarrheal disease (enterotoxigenic B. fragilis) produce a 20-kDa zinc-dependent metalloprot
57 ssay can be used to identify enterotoxigenic B. fragilis and may be used clinically to determine the
58 hogenicity island (BfPAI) in enterotoxigenic B. fragilis (ETBF) strain 86-5443-2-2 and a related gene
59 and efficient elimination of enterotoxigenic B. fragilis (ETBF) in the murine gut by BfUbb, suggestin
62 diarrhea in children (termed enterotoxigenic B. fragilis, or ETBF) produce a heat-labile ca. 20-kDa p
63 er, the cloning and sequencing of the entire B. fragilis toxin gene (bft) from enterotoxigenic B. fra
65 igenic Bacteroides fragilis (ETBF) expresses B. fragilis toxin (BFT) that we hypothesized may contrib
66 Deletion of its gene resulted in the first B. fragilis mutant able to synthesize only one phase-var
67 al homologs, allow corrected annotations for B. fragilis bfr and other dpsl genes within the bacteria
74 tum (F. nucleatum) and Bacteroides fragilis (B. fragilis) in the gut is associated with the developme
77 new, self-transferable transfer factor from B. fragilis LV23 and that this new factor encodes a tetr
78 , overexpressing a recombinant bsh gene from B. fragilis NCTC9343 strain, results in increased unconj
81 dynamics of the metallo-beta-lactamase from B. fragilis have been examined using (15)N NMR relaxatio
82 ucidation of structural details for LPS from B. fragilis, revealing a putative hexuronic acid (HexA)
83 ese data indicate that a purified toxin from B. fragilis strains associated with diarrhea rapidly and
84 biotic colonization of mammals, we generated B. fragilis strains deleted in the global regulator of p
85 the sequence of mlh1, msh2, and msh6 genes, B. fragilis specific 16srRNA and bacterial universal 16s
91 supports lipopolysaccharide biosynthesis in B. fragilis and is subject to feedback regulation by CMP
95 te-specific recombinase family, conserved in B. fragilis, mediate additional DNA inversions of the B.
96 psis in mice; however, Fpn is dispensable in B. fragilis colitis, wherein host proteases mediate BFT
97 a single gene, oxe (i.e., oxygen enabled) in B. fragilis allows for growth in concentrations as high
98 t the presence of the uroS and yifB genes in B. fragilis seems to be linked to pathophysiological and
99 brings the total of oxyR-controlled genes in B. fragilis to five and suggests the existence of a seco
104 e global regulatory nature of the process in B. fragilis suggest an evolutionarily ancient mechanism
105 ) for predicting carbapenemase production in B. fragilis based off the principles of the well-establi
106 lar tests to detect carbapenem resistance in B. fragilis exist, they are not available in most clinic
108 accurately detected carbapenem resistance in B. fragilis with categorical agreement (CA) of 87% (52/6
112 further our understanding of DNA transfer in B. fragilis, we isolated and characterized a new transfe
113 pore-forming toxins, which are widespread in B. fragilis and other human gut-associated Bacteroidales
116 required for GALT development, we introduced B. fragilis along with stress-response mutants of B. sub
117 eriae), Bacteroidetes (the most important is B. fragilis) and Proteobacteria (E. coli, Salmonella, Ye
118 the distribution and colonization of labeled B. fragilis along the intestine, as well as niche compet
119 In contrast to other Bacteroidetes members, B. fragilis produces three HmuY homologs (Bfr proteins).
120 sorption studies demonstrate that the native B. fragilis enzyme tightly binds 2 mol of Zn(II) and, al
122 rates of isolation of B. fragilis versus non-B. fragilis species had an overall effect on susceptibil
123 rom DNA extracted from 28 nonenterotoxigenic B. fragilis isolates or B. distasonis, B. thetaiotaomicr
124 cate that whereas both ETBF and nontoxigenic B. fragilis (NTBF) chronically colonize mice, only ETBF
125 udying a collection of ETBF and nontoxigenic B. fragilis (NTBF) strains, we found that bft and a seco
126 ins that do not secrete BFT are nontoxigenic B. fragilis (NTBF), and those that do are called enterot
127 can be transferred from ETBF to nontoxigenic B. fragilis strains by a mechanism similar to that for t
128 ally acting as a damage signal, SCC, but not B. fragilis, activates canonical pathway of NLRP3 promot
130 symbiosis factor (PSA, polysaccharide A) of B. fragilis signals through TLR2 directly on Foxp3(+) re
132 In this study, we show that the ability of B. fragilis to utilize heme or protoporphyrin IX for gro
133 tential correlation between the abundance of B. fragilis and alterations in the expression of MMR gen
134 tive stress are physiological adaptations of B. fragilis to its environment that enhance survival in
135 the role of the CPC in promoting adhesion of B. fragilis to the peritoneal wall and coordinating the
138 no curated systems-level characterization of B. fragilis' metabolism that provides a comprehensive an
142 nts were designed to determine the effect of B. fragilis enterotoxin on bacteria-enterocyte interacti
150 ich represent 3% of the clinical isolates of B. fragilis, displayed heterogeneity in the regions flan
152 highlights and resolves gaps in knowledge of B. fragilis' carbohydrate metabolism and its correspondi
160 of these findings for the pathophysiology of B. fragilis in extraintestinal infections and competitio
161 ped the sphingolipid biosynthesis pathway of B. fragilis and determined that alpha-galactosyltransfer
162 In this study, we analysed the phenotype of B. fragilis mutants with defective protein glycosylation
163 lycosylation is central to the physiology of B. fragilis and is necessary for the organism to competi
166 rovides the basis for rational prediction of B. fragilis' metabolic interactions with its environment
168 in the number of IRs are active processes of B. fragilis in the endogenous human intestinal ecosystem
172 ulatory molecule, polysaccharide A (PSA), of B. fragilis mediates the conversion of CD4(+) T cells in
175 plots of the deduced amino acid sequence of B. fragilis Omp121 display striking similarity with thos
176 T-ETBF) strains, a nontoxigenic WT strain of B. fragilis (WT-NTBF), WT-NTBF overexpressing bft (rETBF
179 e epidemiology of enterotoxigenic strains of B. fragilis in clinical infections and whether there is
185 esponses specific for B. thetaiotaomicron or B. fragilis were associated with the efficacy of CTLA-4
187 e for commensal bacterial Ags, in particular B. fragilis expressing polysaccharide A, in protecting a
190 e studied the effects of the highly purified B. fragilis fragilysin on the barrier function of cultur
192 2.5 mM, while those of Bacteroides pyogenes, B. fragilis, and Akkermansia muciniphila were greater in
193 To chart the evolution of the more reactive B. fragilis enzyme, we have made changes in an active si
194 f the possibility of metronidazole-resistant B. fragilis strains in the United States and the importa
198 egions of GA3 loci, GA3 T6SSs of the species B. fragilis are likely the source of numerous novel effe
199 polysaccharide complex of a commonly studied B. fragilis strain, 638R, that is distinct from strain 9
200 roximately 6-kb pathogenicity island (termed B. fragilis pathogenicity island or BfPAI) which is pres
202 ca. 20-kDa heat-labile protein toxin (termed B. fragilis toxin [BFT]) have been associated with diarr
203 Collectively, these results demonstrate that B. fragilis adapts within individual microbiomes, pointi
207 ies and enzyme kinetics assays indicate that B. fragilis UroS is functionally different from canonica
208 e deduced amino acid sequences revealed that B. fragilis AhpCF shares approximately 60% identity to o
210 otting and oxyR'::xylB fusions revealed that B. fragilis OxyR does not control its own expression.
211 ysis of infant gut metagenomes revealed that B. fragilis predominantly accounts for agcT abundance re
213 X-ray protein crystallography showed that B. fragilis Bfr proteins are structurally similar to P.
214 ansferrin as a model, it has been shown that B. fragilis alone can rapidly and efficiently deglycosyl
221 D Q5LIW1) is the only protein encoded by the B. fragilis genome with significant identity to any know
223 in conferring charged groups that enable the B. fragilis capsular polysaccharides to induce abscesses
224 %) differ greatly from that reported for the B. fragilis chromosome (42%), suggesting that the BfPAI
226 e proposed minimum kinetic mechanism for the B. fragilis metallo-beta-lactamase-catalyzed nitrocefin
227 egions flanking the Tn4400' insertion in the B. fragilis chromosome revealed the presence of five ope
230 ly, by introducing a C104R mutation into the B. fragilis enzyme, binding of two zinc ions is maintain
233 obtained which was confirmed as part of the B. fragilis enterotoxin gene by Southern blotting with a
234 uxs1 is located in a conserved region of the B. fragilis genome, whereas Bfuxs2 is in the heterogeneo
237 prevalence of F. nucleatum while most of the B. fragilis isolates in CRC cases were reported in Europ
240 was found to be present in the genome of the B. fragilis NCTC9343 strain but absent in strains 638R,
241 report the cloning and overexpression of the B. fragilis phosphonopyruvate decarboxylase gene (aepY),
242 the protein profile of crude extracts of the B. fragilis strains revealed that at least three oxidati
244 ICE acquisition increases the fitness of the B. fragilis transconjugant over its progenitor by arming
246 ETBF was isolated from 20.3% (40/197) of the B. fragilis-positive diarrheal specimens and from 8.1% (
247 heal specimens and from 8.1% (15/185) of the B. fragilis-positive nondiarrheal specimens (P < .001) a
249 isolation of the various species showed the B. fragilis species comprised 58% of the isolates in 198
250 c-dependent metalloprotease toxin termed the B. fragilis toxin (BFT) have been associated with acute
252 at they are functional paralogs and that the B. fragilis NCTC 9343 PSF repeat unit contains xylose.
253 etic calculations have demonstrated that the B. fragilis protein efficiently binds the internal Na(+)
254 subconfluent HT29/C1 cells treated with the B. fragilis toxin (BFT) develop morphologic changes with
256 -independent IL-10 production in response to B. fragilis during its pathogenic interactions with the
262 20-kDa zinc-dependent metalloprotease toxin (B. fragilis enterotoxin; BFT) that reversibly stimulates
264 ained from mice reconstituted with wild type B. fragilis had significantly enhanced rates of conversi
267 rum reactivity against Bacteroides vulgatus, B. fragilis, Prevotella intermedia, and, to a lesser ext
268 nsferrin deglycosylation occurs in vivo when B. fragilis is propagated in the rat tissue cage model o
269 We identify an alternative pathway by which B. fragilis is able to reestablish capsule production an
270 Monocolonization of germ-free animals with B. fragilis increases the suppressive capacity of Tregs
271 o develop abscesses following challenge with B. fragilis or abscess-inducing zwitterionic polysacchar
273 ut Tregs demonstrated that colonization with B. fragilis promotes a distinct IFN gene signature in Fo
275 This defect was overcome by gavage with B. fragilis, by immunization with B. fragilis polysaccha
276 9 enterocytes were incubated for 1 hour with B. fragilis enterotoxin, followed by 1 hour of incubatio
277 avage with B. fragilis, by immunization with B. fragilis polysaccharides, or by adoptive transfer of
278 o was increased in YAMC cells incubated with B. fragilis, an effect mediated by lipopolysaccharide an
279 ritonitis was worsened in mice injected with B. fragilis and high-fiber SCC, whereas zero-fiber SCC a
281 sphingolipids, we found that treatment with B. fragilis glycosphingolipids-exemplified by an isolate