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1 do-Joseph Disease, also contains an expanded CAG repeat.
2 ulnerable to the dominant effects of the HTT CAG repeat.
3 protective in the context of an expanded HTT CAG repeat.
4 et are determined largely by the size of HTT CAG repeat.
5 aused by expansion of polyglutamine-encoding CAG repeats.
6 iate the stress-induced mutagenesis (SIM) of CAG repeats.
7 ntingtin gene (mHTT), which harbors expanded CAG repeats.
8 were inversely correlated with the number of CAG repeats.
9 lutamine (polyQ) domains encoded by expanded CAG repeats.
10 hat prevents expansion of disease-associated CAG repeats.
11 omatic instability of highly expanded (CTG)*(CAG) repeats.
12 are caused by unstable expansions of (CTG)*(CAG) repeats.
13 The ORs were 2.70 (95% CI, 1.47-4.93) for 31 CAG repeats, 11.09 (95% CI, 4.16-29.57) for 32 repeats,
16 RNA duplexes; (ii) the sequences surrounding CAG repeats affect allele-selectivity of anti-CAG oligon
17 ich contains the human HD mutation with a 51 CAG repeat allele, exhibits motor deficits that begin wh
19 is a neurodegenerative disorder caused by a CAG repeat amplification in the gene huntingtin (HTT) th
20 ipts dependent on the length of the targeted CAG repeat and on the CTG repeat length and concentratio
22 n factors (ZFP-TFs) to target the pathogenic CAG repeat and selectively lower mHTT as a therapeutic s
23 uences associated with Huntington's disease (CAG repeats) and myotonic dystrophy type 1 (CTG repeats)
24 t length and genetic background (115 and 250 CAG repeats, and a mixed CBAxC57 or pure C57 background)
25 hanges, or cell loss in the tgHD rat with 51 CAG repeats, and suggest that this protocol could provid
26 In budding yeast, we found that expanded CAG repeats are more likely than unexpanded repeats to l
28 , these perturbations are overcome in longer CAG repeats, as demonstrated by studies of isolated and
29 , relevant to myotonic dystrophy type I, and CAG repeats associated with poly-glutamine diseases.
31 persistent double-stranded breaks, expanded CAG repeats at the nuclear envelope associate with pores
32 resses somatic expansion of the Htt knock-in CAG repeat, blocked the Fan1 knock-out-induced accelerat
35 nucleic acid antisense oligomers that target CAG repeats can preferentially inhibit mutant ataxin-3 a
37 rroneously harbors a tandem duplicate of the CAG repeat-containing exon, and a corrected model, intro
38 sion repair (BER) is responsible for causing CAG repeat contractions downstream of Fcy1, but not frag
44 of a DNA base lesion can also contribute to CAG repeat deletions that were initiated by the formatio
45 t are precisely associated with the shape of CAG repeat dependence over time, among which 5 pairs wit
46 e-onset HD (JHD) lines, which appeared to be CAG repeat-dependent and mediated by the loss of signali
50 of their central importance in the expanded CAG repeat diseases that include Huntington's disease.
52 other neurodegenerative diseases, including CAG repeat disorders, or in peripheral tissues of c9FTD/
53 We show that FAN1 binds to the expanded HTT CAG repeat DNA and its nuclease activity is not required
55 c expansion of the Huntington's disease (HD) CAG repeat drives the rate of a pathogenic process ultim
56 ere, we discovered size-limited expansion of CAG repeats during repair of 8-oxoG in a wild-type mouse
58 disease is initiated by the expression of a CAG repeat-encoded polyglutamine region in full-length h
59 erative disease caused by the expansion of a CAG repeat encoding a polyglutamine tract in Ataxin-1 (A
60 egenerative disease caused by expansion of a CAG repeat encoding a polyglutamine tract in ATXN7, a co
61 isorders strongly depend on the expansion of CAG repeats encoding consecutive polyglutamines (polyQ)
62 egenerative disorders caused by expansion of CAG repeats encoding polyglutamine (polyQ) tracts in CAC
63 mortality, so we tested whether the expanded CAG repeat exerts a dominant influence on age at death a
64 sted for their relation to the length of the CAG repeat expansion and to the residual age at onset (R
65 these studies support the process of somatic CAG repeat expansion as a therapeutic target in HD, and
66 xoguanine (8-oxoG) is implicated in neuronal CAG repeat expansion associated with Huntington disease,
67 nocopy of Huntington's disease caused by CTG/CAG repeat expansion at the Junctophilin-3 (JPH3) locus.
69 fatal neurodegenerative disorder caused by a CAG repeat expansion encoding a polyglutamine tract in t
72 FAN1 overexpression in human cells reduces CAG repeat expansion in exogenously expressed mutant HTT
75 pression studies, knockout of FAN1 increased CAG repeat expansion in HD-induced pluripotent stem cell
76 HD) is determined largely by the length of a CAG repeat expansion in HTT but is also influenced by ot
77 ninety-eight patients carried a pathological CAG repeat expansion in HTT, whereas 28 patients (12 wom
82 disease is caused by an abnormally expanded CAG repeat expansion in the HTT gene, which confers a pr
89 HD) is a neurodegenerative disease caused by CAG repeat expansion in the huntingtin gene (HTT) and in
94 RNA is toxic, and at the DNA level, somatic CAG repeat expansion in vulnerable cells influences the
95 rited neurodegenerative disorder caused by a CAG repeat expansion leading to an elongated polyglutami
99 ssive neurodegenerative disorder caused by a CAG repeat expansion within exon 1 of HTT, encoding hunt
100 rited neurodegenerative disorder caused by a CAG repeat expansion within exon 1 of the huntingtin (HT
101 odegenerative disorder caused by an abnormal CAG repeat expansion within exon 1 of the huntingtin gen
102 ulbar muscular atrophy (SBMA) results from a CAG repeat expansion within the androgen receptor gene (
103 hat functional FAN1 acts to suppress somatic CAG repeat expansion, likely in genetic interaction with
110 mine (polyQ) diseases, which are caused by a CAG-repeat expansion within the coding region of the ass
112 es, which are believed to be responsible for CAG repeat expansions associated with certain human neur
113 Msh3-/- cells are severely defective for CTG*CAG repeat expansions but show full activity on contract
115 n other polyglutamine diseases, suggest that CAG repeat expansions can promote aberrant splicing to p
119 ron disease is often seen in SCA2, and ATXN2 CAG repeat expansions in the long normal range increase
122 rebellar ataxia type 3 (SCA3), are caused by CAG repeat expansions that encode abnormally long glutam
123 tion were required to prevent Rad5-dependent CAG repeat expansions, and H4K16 acetylation was enriche
126 ase Fcy1 significantly decreased the rate of CAG repeat fragility and contractions in the rnh1Deltarn
128 Shorter wild-type alleles, other genomic CAG-repeat genes, and neighboring genes were unaffected.
129 ington's disease models in which an expanded CAG repeat had been knocked in to the endogenous Htt gen
130 base lesion located in the loop region of a CAG repeat hairpin can remove the hairpin, attenuating r
132 es mouse HD gene homolog (Hdh) with extended CAG repeat- HdhQ250, which was derived from the selectiv
134 th expanded alleles containing 44, 77 or 109 CAG repeats, HTTex1a and HTTex1b were effective in suppr
135 ion of huntingtin (Htt) exon 1 with expanded CAG repeats, implicated in Huntington pathology, undergo
137 r data imply that the length of the expanded CAG repeat in ATXN3 is a major determinant of clinical d
138 tive disorder caused by the expansion of the CAG repeat in exon 1 of the huntingtin (HTT) gene, which
139 We assessed the sequence downstream of the CAG repeat in HTT [reference: (CAG)n-CAA-CAG], since var
142 d up to a 15-fold increase in changes to the CAG repeat in human and rodent cell lines, and that long
143 (MND) caused by an abnormal expansion of the CAG repeat in the androgen receptor (AR) gene on the X-c
144 untington's disease is caused by an expanded CAG repeat in the gene encoding huntingtin (HTT), result
154 riably fatal, HD is caused by expansion of a CAG repeat in the Huntingtin gene, creating an extended
155 odegenerative disorder caused by an expanded CAG repeat in the huntingtin gene, which encodes an abno
162 mmon genetic cause, which is an expansion of CAG repeats in the coding region of the causative genes
164 e disease is caused by abnormal expansion of CAG repeats in the gene encoding huntingtin, but how mut
168 MJD), the expanded cytosine adenine guanine (CAG) repeat in ATXN3 is the causal mutation, and its len
169 fferent numbers of cytosine-adenine-guanine (CAG) repeats in a fragment of the gene responsible for H
171 knock-out increased somatic expansion of Htt CAG repeats, in the juvenile- and the adult-onset HD ran
172 which have human huntingtin exon 1 with 140 CAG repeats inserted into the endogenous mouse huntingti
173 f pathways involved in transcription-induced CAG repeat instability and begin to define their interre
174 suggests that tissue-to-tissue variation in CAG repeat instability arises, in part, by different und
175 ty bias to devise a method to assess average CAG repeat instability at the protein level in a mixed p
176 also showed that transcription-dependent CTG.CAG repeat instability in human cells is stimulated by s
179 e germline; however, it dramatically reduces CAG repeat instability in neuronal tissues-striatum, hip
181 e culture assay for identifying modifiers of CAG repeat instability, we found that transfection of ZF
184 loop formation and reveal two mechanisms for CAG repeat instability: one mediated by cytosine deamina
185 dary structure-forming DNA sequences such as CAG repeats interfere with replication and repair, provo
188 that a cis-regulatory effect of the expanded CAG repeat is not a critical component of the underlying
192 nsion beyond a threshold of approximately 35 CAG repeats is the cause of several human diseases.
193 n of 1 x 1 nucleotide AA internal loops in r(CAG) repeats is anti-anti but can adopt syn-anti dependi
197 ith those who did not, after controlling for CAG repeat length and age-related risk (p=0.006 and 0.00
201 uced gene proximity, androgen receptor exon1 CAG repeat length and expression of the PIWIL1 gene.
202 /2 Huntington's Disease models, differing in CAG repeat length and genetic background (115 and 250 CA
203 this read-through product is proportional to CAG repeat length and is present in all knock-in mouse m
204 exhibited a strong correlation with average CAG repeat length at the genomic DNA level determined by
205 nsistent with the hypothesis that somatic HD CAG repeat length expansions in target tissues contribut
208 lished by December 29, 2013, reporting ATXN2 CAG repeat length in patients with ALS and controls.
209 in insight into how mutant huntingtin (mHtt) CAG repeat length modifies Huntington's disease (HD) pat
210 However, the contribution of the expanded CAG repeat length to the rate of disease progression aft
212 osis of Huntington's disease, accounting for CAG repeat length, age, and the interaction of CAG repea
213 n of 11 HD participants had known huntingtin CAG repeat length, allowing determination of a burden of
215 had prognostic value, independent of age and CAG repeat length, for predicting subsequent clinical di
216 individually matched with incident cases on CAG repeat length, sex, and age, who were not diagnosed
217 ormulas have been developed based on age and CAG repeat length, to predict when HD motor onset will o
223 ssociation between cytosine-adenine-guanine (CAG) repeat length and age at onset of Huntington's dise
224 t, HD age at death is determined by expanded CAG-repeat length and has no contribution from the norma
225 HTT haplotypes were associated with altered CAG-repeat length distribution or residual age at the on
226 e selected behavioral signatures for age and CAG-repeat length that most robustly distinguished betwe
227 elating atrophy to the genetic marker of HD (CAG-repeat length) and motor and cognitive symptoms.
228 elic series of R6/2 mice carrying a range of CAG repeat lengths between 109 and 464.) This analysis r
231 from an iterative strategy yielded predicted CAG repeat lengths that were significantly positively co
232 HD mouse model, R6/2, carrying two different CAG repeat lengths, and a relatively high degree of over
233 gradient of decreasing pathology with longer CAG repeat lengths, reflecting our previous findings wit
234 m DM1 fibroblasts, all showing different CTG.CAG repeat lengths, thus demonstrating somatic instabili
240 tisense oligonucleotide complementary to the CAG repeat (LNA-CTG) preferentially binds to mutant HTT
242 n-enriched RNA from flies expressing a toxic CAG-repeat mRNA (CAG100) and a non-toxic interrupted CAA
244 irs motor function in men and is linked to a CAG repeat mutation in the androgen receptor (AR) gene.
246 s disease (HD), the size of the expanded HTT CAG repeat mutation is the primary driver of the process
247 determined primarily by the length of the HD CAG repeat mutation, but is also influenced by other mod
250 s provide evidence that breakage at expanded CAG repeats occurs due to R-loop formation and reveal tw
252 study of using RepeatHMM-DB, we evaluate the CAG repeats of ATXN3 for 20 patients with spinocerebella
253 alyzed the role of Mrc1 and Tof1 at expanded CAG repeats of medium and long lengths, which are known
254 ing the rate of somatic expansion of the HTT CAG repeat or altering the resulting CAG threshold lengt
256 ense oligonucleotides (ASOs) targeted to the CAG repeat region of HTT transcripts have been of partic
258 he nontemplate DNA strand at transcribed CTG.CAG repeats remains partially single-stranded in human g
259 l repeat range, supporting the view that the CAG repeat represents a functional polymorphism with dom
263 cent findings, however, demonstrate that the CAG-repeat RNA, which encodes the toxic polyQ protein, a
270 stone H4 acetylation is required to maintain CAG repeat stability and promote gap-induced sister chro
271 are nearly identical in amino acid sequence, CAG repeat stability depends on H2A copy 1 (H2A.1) but n
272 The genetic cause is an expansion of the CAG repeat stretch in the HTT gene encoding huntingtin p
275 SCA7 and SCA17 are caused by expansion of a CAG repeat that encodes a polyglutamine tract in the aff
276 on disease (HD) is caused by an expanded HTT CAG repeat that leads in a length-dependent, completely
277 w that FAN1 affects somatic expansion of the CAG repeat through a nuclease-independent mechanism.
279 xia type 1 (SCA1), which carries an expanded CAG repeat tract at the endogenous mouse Sca1 locus.
280 5'S)-5',8-cyclo-2'-deoxyadenosine (cdA) in a CAG repeat tract caused CTG repeat deletion exclusively
281 ington's disease (HD), caused by an expanded CAG repeat tract in HTT, genetic variation has been unco
283 ed three PMOs to selectively target expanded CAG repeat tracts (CTG22, CTG25 and CTG28), and two PMOs
285 previously shown that transcription through CAG repeat tracts destabilizes them in a way that depend
286 ng a selection assay based on contraction of CAG repeat tracts in human cells, we screened the Prestw
288 n can promote repeat expansion, using (CTG)*(CAG) repeat tracts in the size range that is typical for
289 transgene locus driving the expression of a CAG repeat transcript (HDL2-CAG) from the strand antisen
291 ygous DCTN1 p.T54I, FUS p.P431L, and HTT (42 CAG repeats) were identified as pathogenic mutations.
292 gh HD pathogenesis is driven by the expanded CAG repeat, whether the mutation influences the expressi
293 ypical +1 shift site, UUC C at the 5' end of CAG repeats, which has some resemblance to the influenza
294 gs indicate that the number of uninterrupted CAG repeats, which is lengthened by the LOI, is the most
295 corrected by the replacement of the expanded CAG repeat with a normal repeat using homologous recombi
296 s disease (HD), which are caused by expanded CAG repeats within an allele of the ataxin-3 (ATXN3) and
298 HD and MJD are caused by an expansion of CAG repeats within one mRNA allele encoding huntingtin (
300 a yeast artificial chromosome containing 128 CAG repeats (YAC128) with low-dose memantine blocks extr