コーパス検索結果 (1語後でソート)
通し番号をクリックするとPubMedの該当ページを表示します
1 of EBNA1, a viral encoded sequence-specific DNA binding protein.
2 A sliding clamp, and the RPA single-stranded DNA binding protein.
3 cation of RADX as an RPA-like, single-strand DNA binding protein.
4 ble to any type of yeast surface expressible DNA-binding protein.
5 c helix-loop-helix leucine zipper (bHLH-Zip) DNA-binding protein.
6 y resembling helix-turn-helix motif found in DNA binding proteins.
7 r chromatin remodelers, but not to unrelated DNA binding proteins.
8 , we discovered that cohesin SA1 and SA2 are DNA binding proteins.
9 A occupied by tandem arrays of high-affinity DNA binding proteins.
10 A (ssDNA) and interacting with several other DNA binding proteins.
11 ics on DNA in the presence of multiple other DNA binding proteins.
12 gests they do not block 1D searches by other DNA binding proteins.
13 to the superfamily of basic-helix-loop-helix DNA-binding proteins.
14 nots discovered so far are either enzymes or DNA-binding proteins.
15 sites, including potential roles of several DNA-binding proteins.
16 e researchers to use this method to identify DNA-binding proteins.
17 rules are developed to insert operators for DNA-binding proteins.
18 acterized demonstrating that Ml proteins are DNA-binding proteins.
19 oid in a way similar to exploration by other DNA-binding proteins.
20 interactions between regulatory elements and DNA-binding proteins.
21 been experimentally assayed for thousands of DNA-binding proteins.
22 target DNA by adjacently bound programmable DNA-binding proteins.
23 rning method for the effective prediction of DNA-binding proteins.
24 insight into the searching mechanism used by DNA-binding proteins.
25 activator of interferon regulatory factors/Z-DNA binding protein 1 (DAI/ZBP1) bound plasmid DNA in th
26 o-SMAD1/5 and the expression of inhibitor of DNA binding protein 1 (ID1) were upregulated in HCV-infe
27 er, we identified the innate immune sensor Z-DNA binding protein 1 (ZBP1) as the apical sensor of fun
30 ntly identified chromodomain helicase/ATPase DNA binding protein 1-like (Chd1l) as a novel regulator
33 other remodelers, the chromodomain helicase DNA-binding protein 1 (Chd1) remodeler repositions nucle
36 Cullin 1 (CUL1), Cullin 4A (CUL4A), damaged DNA-binding protein 1 (DDB1), and S-phase kinase-associa
41 dapter-inducing interferon-beta (TRIF) and Z-DNA-binding protein 1 (ZBP1)/DNA-dependent activator of
44 port that the XPE gene product DDB2 (damaged DNA binding protein 2), a nucleotide excision repair pro
46 litated in the genomic context by UV-damaged DNA-binding protein 2 (DDB2), which is part of a multipr
47 factor and the co-regulator single-stranded DNA-binding protein 3 (SSBP3) regulates the genes necess
49 Here we report that chromodomain helicase DNA-binding protein 4 (CHD4) physically interacts with a
50 Here, we show that Chromodomain Helicase DNA-binding protein 4 (CHD4), a major ATPase/helicase su
51 interacted with CHD4 (chromodomain helicase DNA-binding protein 4), which is a part of the NuRD comp
56 asmic mislocalization and aggregation of TAR-DNA binding protein 43 (TDP-43) is found in the majority
60 Aggregation of TDP-43 (transactive response DNA binding protein 43 kDa) is a hallmark of certain for
63 RBPs affected by excitotoxicity included TAR DNA-binding protein 43 (TDP-43) and, most robustly, fuse
64 usions of pathogenic deposits containing TAR DNA-binding protein 43 (TDP-43) are evident in the brain
67 icates a direct role of transactive-response DNA-binding protein 43 (TDP-43) in the pathology of ALS
69 The 43-kDa trans-activating response region DNA-binding protein 43 (TDP-43) is a product of a causat
73 giopathy), Lewy bodies, transactive response DNA-binding protein 43 (TDP-43) pathology, and hippocamp
76 compared to transactivation response element DNA-binding protein 43 (TDP-43) proteinopathy patients w
77 ogies (cerebrovascular, transactive response DNA-binding protein 43 (TDP-43)) may also influence cogn
82 Hyperphosphorylated transactive response DNA-binding protein 43 (TDP-43, encoded by TARDBP ) prot
83 ns, including fused in sarcoma (FUS) and TAR DNA-binding protein 43 (TDP-43, encoded by TARDBP), are
84 lpha-synuclein in Parkinson disease, and TAR DNA-binding protein 43 in amyotrophic lateral sclerosis.
85 s known to influence the accumulation of TAR DNA-binding protein 43 kDa (TDP-43) proteinopathy, and t
89 pathology, Lewy bodies, transactive response DNA-binding protein 43 pathology, hippocampal sclerosis,
92 ion with and loss of function of TDP-43 (TAR DNA-binding protein 43), which we show interacts with al
93 pal sclerosis, 11.7% to transactive response DNA-binding protein 43, 8.1% to cerebral amyloid angiopa
94 ic mutations in the TARDBP gene encoding TAR DNA binding protein-43 (TDP-43) have been identified in
98 gregated proteins, the most common being TAR DNA-binding protein-43 (TDP-43), tau, and fused in sarco
99 Here, we show that Chromodomain Helicase DNA-binding protein 6 (CHD6), distinct to other CHD enzy
100 Here, we identify the Chromodomain Helicase DNA Binding Protein 7 (CHD7), which is frequently mutate
102 function mutations in chromodomain helicase DNA-binding protein 7 (CHD7(LOF)) and lysine (K) methylt
103 he chromatin remodeler chromodomain-helicase-DNA-binding protein 7 (CHD7) expanded phenotypic HSPCs,
104 n demonstrate that the chromodomain helicase DNA-binding protein 7 (Chd7), frequently associated with
105 tly, it was shown that chromodomain helicase DNA-binding protein-7 (CHD7) interacts with RUNX1 and su
106 for the protein CHD8 [chromodomain-helicase-DNA-binding protein 8]) are among the most common mutati
107 we found that ATPases chromodomain helicase DNA-binding protein 9 (CHD9) and Brahma homologue (BRM,
109 changes in the mitochondrial single-stranded DNA-binding protein, a crucial protein involved in mtDNA
110 nteracting with an ensemble of (multivalent) DNA-binding proteins able to switch between an "on" (bin
111 tibility, agt and Taf1 Both encode unrelated DNA-binding proteins, agt for an alkyl-cysteine-S-alkylt
112 hromocenter modules, consisting of satellite DNA binding proteins and their cognate satellite DNA, pa
113 cterize the cell-to-cell transmission of TAR DNA-binding protein and alpha-synuclein, involved in amy
114 be genetically encoded by binding sites for DNA-binding proteins and can also involve changes in chr
117 of two MT-A70 proteins and two homeobox-like DNA-binding proteins and specifically methylates dsDNA.
118 quences of 1063 (518 DNA-binding and 545 non DNA-binding) proteins and using jackknife validation, St
119 ur selected genes: Actin (Act), Apicomplexan DNA-binding protein (Ap2), Rhomboid protein 1 (Rom 1), a
120 of the two DNA strands while multi-specific DNA binding proteins are generally biased towards one st
121 The experimental methods used to identify DNA-binding proteins are expensive and time consuming an
122 ting experimental techniques for identifying DNA-binding proteins are time-consuming and expensive.
123 gates of the RNA-binding protein TDP-43 (TAR DNA-binding protein) are a hallmark of the overlapping n
124 Our approach should be adaptable to other DNA-binding proteins as well as small proteins fused to
125 n of translin (trsn), a highly conserved RNA/DNA binding protein, as essential for starvation-induced
127 sults demonstrate that YaaA is a new type of DNA-binding protein associated with the oxidative stress
128 monstrated to target a shared substrate, the DNA binding protein BAF, elucidating a signaling pathway
129 oteins that associate with the chromatin and DNA-binding protein Barrier-to-autointegration factor (B
130 t the role of intragenic DNA methylation and DNA binding protein BORIS in cancer-specific splicing an
131 dition of mitochondrial single-stranded (ss) DNA-binding protein both influences the ways Twinkle loa
132 hesis with the specificity of a programmable DNA-binding protein by using protein trans-splicing to l
133 otential target site, which may be how other DNA binding proteins can steer selection of advantageous
136 he high-mobility group protein B1 (HMGB1), a DNA-binding protein capable of inducing secretion of TNF
138 complex, incorporating the sequence-specific DNA-binding protein Cep3 together with regulatory subuni
139 sively assesses the influence on contacts of DNA-binding proteins, cis-regulatory elements and DNA co
140 zer of the complex, MSL2, and the ubiquitous DNA-binding protein CLAMP are key players in the specifi
143 modifiers, chromatin remodelers, and methyl-DNA binding proteins contribute to neurodevelopmental de
145 hysical tethers of loops are anchored by the DNA-binding protein CTCF and the cohesin ring complex.
146 ions between two sequence-specific satellite DNA-binding proteins, D1 and Prod, bound to their cognat
148 Here, we report that the damage-specific DNA-binding protein DDB2 is critical for beta-catenin-me
150 reveal that Death Effector Domain-containing DNA-binding protein (DEDD), which is overexpressed in >
153 excess heterogeneous DNA, sequence-specific DNA-binding proteins execute various translocation mecha
154 onstrated that Hop1 is a structure-selective DNA-binding protein exhibiting high affinity for the Hol
156 atin remodeling proteins of the chromodomain DNA-binding protein family, CHD7 and CHD8, mediate early
159 of stress and starvation, an NAP called Dps (DNA-binding protein from starved cells) becomes highly u
163 cterium Deinococcus radiodurans contains two DNA-binding proteins from starved cells (Dps): Dps1 (DR2
164 We show that the phosphorylation of the RNA-DNA binding protein fused in sarcoma (FUS) is higher in
166 lification requires only the single-stranded DNA-binding protein gp32 from bacteriophage T4 and a str
168 Recent advances in the field of programmable DNA-binding proteins have led to the development of faci
171 NA colocalized with the VACV single-stranded DNA binding protein I3 in multiple puncta throughout the
173 e results reveal the role of single-stranded DNA binding proteins in controlling Exo1-catalyzed resec
174 ion followed by sequencing (ChIP-Seq) of 104 DNA binding proteins in embryonic stem cell (ESC) lines.
176 ow that dinoflagellate nuclei have recruited DNA-binding proteins in three distinct evolutionary wave
177 cleosomes occupy DNA targets for a subset of DNA-binding proteins, including CCCTC-binding factor (CT
182 viruses, 60 copies of the positively charged DNA binding protein J guide the single-stranded DNA geno
183 to the nucleus, where it associates with the DNA-binding protein LAG-1/CSL to activate target gene tr
184 g evidence suggests involvement of other RNA/DNA binding proteins, like FUS in DNA damage response (D
185 tingly, 5hmC colocalized with the methylated DNA binding protein MeCP2 and with the active chromatin
186 Once deposited, mCA is bound by the methyl-DNA-binding protein MECP2 and functions in a rheostat-li
187 we used bioinformatics to identify cellular DNA-binding protein motifs adjacent to either latent or
188 l cells in a manner that is dependent on the DNA-binding protein MRE11 and the antiviral factor IRF1
191 ral dementia (FTD) with transactive response DNA-binding protein of 43 kD (TDP-43)-positive inclusion
192 er the past decade, the transactive response DNA-binding protein of 43 kDa (TDP-43) has been recogniz
194 ical aggregation of the transactive response DNA-binding protein of 43 kDa (TDP-43) is associated wit
195 bnormalities in the transactivation response DNA-binding protein of 43 kDa (TDP-43), whose nucleo-cyt
196 egans, including dnc-1 mutants and human TAR DNA-binding protein of 43 kDa overexpressing worms.
200 cisely orient objects-and use them to dock a DNA-binding protein on a double-helix stage that has use
202 (WD repeat and high mobility group [HMG]-box DNA-binding protein), one of the genes that was upregula
203 nvolving nonstructural proteins, such as the DNA-binding protein P1 and the genome terminal protein (
206 starvation protein A (SspA) complex and the DNA-binding protein pathogenicity island gene regulator
210 of the lysine residues in histones and other DNA-binding proteins plays a major role in regulation of
211 This complex, comprised of the zinc finger DNA-binding protein PRDM9 and the SNF2 family chromatin
212 show that the chromatin remodeler HELLS and DNA-binding protein PRDM9 function together to open chro
213 In this paper, we present iDNAProt-ES, a DNA-binding protein prediction method that utilizes both
216 o form t-loops or complex with single-strand DNA binding proteins, raising the question of the mechan
217 ching has been reported or proposed for many DNA-binding proteins, raising the question of how widesp
219 ier-to-autointegration factor (BAF), a small DNA-binding protein, rapidly localizes to nuclear ruptur
220 NA) screening, we identified single-stranded DNA binding protein replication protein A (RPA) as a reg
221 nted the accumulation of the single-stranded DNA binding protein replication protein A (RPA) on damag
222 o occupancy of mitochondrial single-stranded DNA binding protein reported previously and provide stro
223 nucleotide deaminases linked to programmable DNA-binding proteins represents a promising approach to
225 a-helical protein; and LUX ARRYTHMO (LUX), a DNA-binding protein required to recruit the evening comp
226 DNA-binding activity of the single-stranded DNA-binding protein RPA, efficient DNA replication throu
227 alleviated by binding of the single-stranded DNA binding protein, RPA, to the excluded DNA strand.
229 c transcription factor complexes composed of DNA binding proteins, RUNXs, and a non-DNA binding prote
230 the prototypic Escherichia coli HJ-specific DNA-binding protein RuvA could be functionally exchanged
231 ssion yeast cells carrying a mutation in the DNA-binding protein Sap1 show defects in DNA replication
233 g specificity, we found that highly specific DNA-binding proteins show balanced hydrogen bonding with
234 nucleosomes can influence, or be altered by, DNA-binding proteins, single-molecule techniques are inc
238 rotein that binds to E. coli single-stranded DNA binding protein (SSB) to function as a recombination
239 During DNA replication, the single-stranded DNA binding protein (SSB) wraps single-stranded DNA (ssD
240 The herpes simplex virus (HSV) single-strand DNA binding protein (SSB), ICP8, is the central player i
244 e prion-forming potential of single-stranded DNA-binding protein (SSB) of Campylobacter hominis Our f
246 of LMO2 and LDB1 as well as single-stranded DNA-binding protein (SSBP) cofactors and DNA-binding bas
251 a encode homooligomeric single-stranded (ss) DNA-binding proteins (SSBs) that coat and protect ssDNA
252 domain binding protein (LDB)-single-stranded DNA-binding protein (SSDP) (ChiLS) complex controls nume
254 NA specificity, outside of extremely modular DNA binding proteins such as TAL effectors, has generall
255 covariance between histone modifications and DNA binding proteins, such as the relationship between t
259 equence-specific double- and single-stranded DNA-binding proteins, Taz1 and Pot1, respectively, bridg
260 tive beta-catenin at the dorsal midline, the DNA-binding protein TCF binds and actively represses gen
263 egeneration (FTLD) with transactive response DNA-binding protein (TDP) inclusions in 40.5%, FTLD-tau
264 poral lobar degeneration (FTLD) with longTAR DNA-binding protein (TDP)-43-positive neuropil threads a
265 , expressing ALS-linked gene mutants for TAR DNA-binding protein (TDP-43) and superoxide dismutase 1
267 cluding the telomeric repeat single-stranded DNA-binding protein Teb1 and its heterotrimer partners T
268 p53 tumor suppressor is a sequence-specific DNA binding protein that activates gene transcription to
269 An example is MeCP2, an abundant methylated-DNA binding protein that is mutated in the neurological
270 otein A and Escherichia coli single-stranded DNA binding protein that the magnitude of the Cy3 enhanc
271 ator-like effectors (TALEs) are repeat-based DNA binding proteins that can serve as probes for the di
273 PR-Cas9 genetic screen ZNF410, a pentadactyl DNA-binding protein that in human erythroid cells direct
274 ng et al., 2019) identify hnRNPA2B1 as a new DNA-binding protein that initiates and amplifies antivir
278 E STATEMENT CCCTC-binding factor (CTCF) is a DNA-binding protein that organizes nuclear chromatin top
279 PA over RPA (replication protein A), another DNA-binding protein that participates in the nucleotide
280 ication protein A (RPA) is a single-stranded DNA-binding protein that plays an essential role in DNA
281 tein AT-hook 2 (HMGA2) is a multi-functional DNA-binding protein that plays important roles in tumori
287 ase in accessibility allows Pol II and other DNA-binding proteins to repeatedly visit nearby DNA bind
288 er of the Ribbon-Helix-Helix (RHH) family of DNA-binding proteins, to transfer of DNA and protein sub
289 Most of the methods developed for predicting DNA-binding proteins use the information from the evolut
290 g DNA in the presence of other architectural DNA binding proteins using single-molecule fluorescence
292 specifically measuring target site search by DNA-binding proteins via intersegmental translocation.
293 WWP is a new family of minor groove-specific DNA-binding proteins, which improves our understanding o
294 secondary structure types in highly specific DNA-binding proteins while multi-specific DNA-binding pr
295 6.5- angstrom structure of BurrH, an 82-kDa DNA-binding protein whose helical pseudosymmetry prevent
296 sis of FTLD-Tau (n=24), transactive response DNA-binding protein with 43 kDa (FTLD-TDP) (n=25) or Alz
297 ng factor (CTCF) has been characterized as a DNA-binding protein with important functions in maintain
298 d to the overall binding specificity between DNA-binding proteins with different degrees of binding s
299 haeal gene expression, focusing on conserved DNA-binding proteins within the clade and the factors th
300 to various DNA-binding modules: full-length DNA binding proteins, zinc fingers (ZFs), transcription