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1 EF-G binds to the ribosome in a GTP-bound form and subse
2 EF-G catalyzes translocation of mRNA and tRNAs within th
3 EF-G dependent translocation from the classical PRE comp
4 EF-G rearrangement would then provide directional contro
5 EF-G.GTP binding to the pretranslocation (PRE) complex a
11 bacteria (known as eEF1A in eukaryotes) and EF-G (eEF2), which deliver aminoacyl-tRNAs to the riboso
13 high structural similarity between LepA and EF-G enabled us to derive a homology model for LepA boun
14 degree of sequence identity between LepA and EF-G is reflected in the structural similarity between t
16 ated tRNAs are bound to the 70S ribosome and EF-G-GTP is added, bases A1492 and A1493 again show subs
22 or the splitting of 70S ribosomes by RRF and EF-G/GTP during the lag phase for activation of ribosome
23 ng and accommodation to the empty A site and EF-G action either leads to the slippage of the tRNAs in
24 m of deacylated tRNA into the 50S E site and EF-G binding to the ribosome both contribute to stabiliz
28 depends on competition between viomycin and EF-G for binding to the pretranslocation ribosome, and t
31 tance, we have characterized three S. aureus EF-G mutants with fast kinetics and crystal structures.
34 ved from it, showing the interaction between EF-G and RRF on the 50S subunit in the presence of the n
35 formed, by ultraviolet irradiation, between EF-G and a sarcin/ricin domain (SRD) oligoribonucleotide
36 pendent GTP hydrolysis is inhibited for both EF-G and EF4, with IC(50) values equivalent to the 70S r
37 e in formation of the ALC; and (2) that both EF-G and the ribosomal protein L7/L12 undergo large conf
40 GDP-state cryo-EM maps of the ribosome bound EF-G, allowed us to determine the movement of the labele
44 s studies have suggested that ribosome-bound EF-G undergoes significant structural rearrangements.
51 , the rates of mRNA translocation induced by EF-G in the presence of GTP and a non-hydrolyzable analo
53 ransfer RNA translocation on the ribosome by EF-G, translates a large-scale movement of EF-G's domain
54 se that the release of ribosome-bound RRF by EF-G is required for post-termination complex disassembl
57 the observed failure of FusB to bind E. coli EF-G, and its inability to confer resistance in E. coli.
58 e GTPase active site, resulting in a compact EF-G conformation that favors an intermediate state of r
59 onance energy transfer (smFRET) between (Cy5)EF-G and (Cy3)tRNALys, we studied the translational elon
60 rate that single-turnover ribosome-dependent EF-G GTPase proceeds according to a kinetic scheme in wh
61 We find that hairpin opening occurs during EF-G-catalyzed translocation and is driven by the forwar
64 to the A-site of the ribosome, whereas eEF2 (EF-G in bacteria) translocates the ribosome along the mR
65 l of translocation that begins with the eEF2/EF-G binding-induced ratcheting motion of the small ribo
67 In every round of translation elongation, EF-G catalyzes translocation, the movement of tRNAs (and
75 es with the activity of translocation factor EF-G to unwind mRNA secondary structures using high-reso
77 ical/open state and toward states that favor EF-G dissociation apparently allows the PRE complex to e
80 ain stabilities, which is likely crucial for EF-G function, complicates the folding of this large mul
81 These results suggest a novel function for EF-G and RRF in the post-stress return of PSRP1/pY-inact
84 other hand, the affinity of the ribosome for EF-G*GTP is increased when peptidyl-tRNA is in the A-sit
85 increased the maximal rate of both forward (EF-G dependent) and reverse (spontaneous) translocation.
86 movements of the tRNAs and mRNA or to foster EF-G dissociation from the ribosome after translocation
89 the hairpin promotes dissociation of futile EF-G and thus causes multiple EF-G driven translocation
92 sidic acid (FA) targets elongation factor G (EF-G) and inhibits ribosomal peptide elongation and ribo
93 etween the G' domain of elongation factor G (EF-G) and the L7/L12-stalk base of the large ribosomal s
95 of G proteins, such as elongation factor G (EF-G) bound to the ribosome, as well as many biochemical
96 n synthesis by blocking elongation factor G (EF-G) catalyzed translocation of messenger RNA on the ri
97 triphosphatase (GTPase) elongation factor G (EF-G) catalyzes the subsequent movement of mRNA and tRNA
98 rsally conserved GTPase elongation factor G (EF-G) catalyzes the translocation of tRNA and mRNA on th
100 ycling factor (RRF) and elongation factor G (EF-G) in a guanosine 5'-triphosphate (GTP)-hydrolysis-de
101 osome-dependent GTPase [elongation factor G (EF-G) in prokaryotes and elongation factor 2 (EF-2) in e
103 tion factor 2 (IF2) and elongation factor G (EF-G) induce similar changes in ribosome structure.
107 ntrast, the activity of elongation factor G (EF-G) was strongly impaired in alpha-sarcin-treated ribo
108 n factor Tu (EF-Tu) and elongation factor G (EF-G) with the ribosome during protein synthesis were un
109 otic protein synthesis, elongation factor G (EF-G), a guanosine triphosphatase (GTPase), binds to the
111 recycling factor (RRF), elongation factor G (EF-G), and GTP to prepare the ribosome for a fresh round
112 or (RRF), together with elongation factor G (EF-G), disassembles this posttermination complex into mR
113 factor (RRF) and GTPase elongation factor G (EF-G), synergistically split 100S ribosomes in a GTP-dep
114 These proteins bind to elongation factor G (EF-G), the target of FA, and rescue translation from FA-
115 a proper substrate for elongation factor G (EF-G), thus inhibiting translocation until the E-site tR
117 ed significantly slower elongation factor G (EF-G)-catalyzed translocation through the slippery seque
118 onstructions of certain elongation factor G (EF-G)-containing complexes have led to the proposal that
126 eaction is catalyzed by elongation factor-G (EF-G) and is associated with ribosome-dependent hydrolys
127 ycling factor (RRF) and elongation factor-G (EF-G) are jointly essential for recycling bacterial ribo
128 ycling factor (RRF) and elongation factor-G (EF-G) disassemble the 70S post-termination complex (PoTC
129 biotic thiostrepton and elongation factor-G (EF-G) rigorously localized the binding cleft of thiostre
131 ind to the drug target (Elongation factor G [EF-G]) and promote dissociation of EF-G from FA-stalled
132 n) can occur in the absence of EF-G and GTP, EF-G is essential for enforcing coupled movement of the
134 lts suggest that the SRL is more critical in EF-G than ternary complex binding to the ribosome implic
135 ryptophan at position 127 in the G domain in EF-G and either one of two 5-iodouridine nucleotides in
137 tains a C-terminal domain (CTD) not found in EF-G that has a previously unobserved protein fold.
138 also for triggering interdomain movements in EF-G essential for its function, explaining functional d
139 our structural model, all known mutations in EF-G and RRF that relate to ribosome recycling have been
143 ructures of three Thermus ribosome-tRNA-mRNA-EF-G complexes trapped with beta,gamma-imidoguanosine 5'
145 30S head domain) can occur in the absence of EF-G and GTP, EF-G is essential for enforcing coupled mo
147 mRNA and two tRNAs, formed in the absence of EF-G or GTP, provides insight into the respective roles
148 ubunit rotational movement in the absence of EF-G, fluctuating between two conformations correspondin
149 n interaction is disrupted in the absence of EF-G, resulting in slippage of the translational reading
151 ing the PoTC and (ii) the modes of action of EF-G during tRNA translocation and ribosome-recycling st
153 ion (k(trans)), and the apparent affinity of EF-G for the pretranslocation complex (i.e., increases K
155 in this model and a comparative analysis of EF-G structures in various nucleotide- and ribosome-boun
156 hibition while inducing a closer approach of EF-G to the GAC than is seen during normal turnover.
160 plexes, we have proposed that the binding of EF-G to an RRF-containing posttermination ribosome trigg
163 the P-site tRNA suggest that the binding of EF-G would trigger the removal of deacylated tRNA from t
165 ed thiostrepton slows the initial binding of EF-G, and prevents both formation of the more stable EF-
169 observe a previously unseen conformation of EF-G in the pretranslocation complex, which is independe
170 ted, translocation-competent conformation of EF-G while GTP hydrolysis triggers EF-G release from the
172 rgy transfer (FRET) between the G' domain of EF-G and the N-terminal domain of ribosomal protein L11
173 cid residue near the tip of the G' domain of EF-G with undecagold, which was then visualized with thr
174 bosomal protein L7/L12, and the G' domain of EF-G, participate in formation of the ALC; and (2) that
179 changes in the conformational flexibility of EF-G in response to FusB binding and show that these cha
180 structure and conformational flexibility of EF-G, but which of these changes drives FA resistance wa
181 SRL to the supposedly catalytic histidine of EF-G (His87), we probed this interaction by an atomic mu
182 f domain IV of EF-G relative to domain II of EF-G using ensemble and single-molecule Forster resonanc
185 cant change in the dynamics of domain III of EF-G(C3) that leads to an increase in a minor, more diso
186 d a kinetic model for viomycin inhibition of EF-G catalyzed translocation, allowing for testable pred
187 t FA functions rather as a slow inhibitor of EF-G.GTPase, permitting a number of GTPase turnovers pri
189 us structural analysis of the interaction of EF-G with the ribosome used either model complexes conta
192 tream ap/P-tRNA is contacted by domain IV of EF-G and P-site elements within the 30S subunit body, wh
194 , upon ribosomal translocation, domain IV of EF-G moves toward the A site of the small ribosomal subu
195 ndings suggest a model in which domain IV of EF-G promotes the translocation of tRNA from the A to th
196 Here, we follow the movement of domain IV of EF-G relative to domain II of EF-G using ensemble and si
197 talk and the L11 region, and of domain IV of EF-G with the tRNA at the peptidyl-tRNA binding site (P
198 Here, we follow the movement of domain IV of EF-G, which is critical for the catalysis of translocati
199 Here, we report the rotational motions of EF-G domains during normal translocation detected by sin
200 ecedes P(i) release, paralleling movement of EF-G following its binding to the ribosome, and in both
201 y EF-G, translates a large-scale movement of EF-G's domain IV, induced by GTP hydrolysis, into the do
202 The physiological role of LepA, a paralog of EF-G found in all bacteria, has been a mystery for decad
205 sed states, respectively, in the presence of EF-G before translocation, in contrast with DeltaSL-prog
206 conditions, including 1), in the presence of EF-G; 2), spontaneously; 3), in different buffers, and 4
208 cus on the distance between the G' region of EF-G and the N-terminal region of L11 (L11-NTD), located
209 formational change in the Switch I region of EF-G, suggesting that a conformational signal transducti
214 Although the high-resolution structure of EF-G bound to the posttranslocation ribosome has been de
216 four atomic-resolution crystal structures of EF-G bound to the ribosome programmed in the pre- and po
217 strom resolution x-ray crystal structures of EF-G complexed with a nonhydrolyzable guanosine 5'-triph
220 e MMB-GUI to create a possible trajectory of EF-G mediated gate-passing translocation in the ribosome
221 is facilitated by a structural transition of EF-G from a compact to an elongated conformation, which
223 says to study the effects of thiostrepton on EF-G and a newly described translation factor, elongatio
224 aging from multiple structural perspectives, EF-G is shown to accelerate structural and kinetic pathw
226 In contrast, the complexes of ribosome, EF-G and thiostrepton could bind RRF, although with lowe
227 upon binding to a pretranslocation ribosome, EF-G moves from a compact to a more extended conformatio
229 state, indicating that it traps the ribosome.EF-G complex in a preexisting conformation formed during
231 amount of 70S ribosomes increased, more RRF, EF-G and GTP were necessary to split 70S ribosomes.
234 We found that although HflX and the RRF/EF-G pair are functionally interchangeable, HflX is expr
236 inal domain of L11 is necessary to stabilize EF-G binding in the post-translocation state, and thiost
239 rganizations upon RRF binding and subsequent EF-G binding could be instrumental in destabilizing the
243 Collectively, our data demonstrate that EF-G and the L1 stalk allosterically collaborate to dire
244 lts provide primary, real-time evidence that EF-G induces direct or indirect structural changes in th
247 insights into the conformational space that EF-G samples on the ribosome and reveal that tRNA transl
249 other translocation modulators suggest that EF-G-dependent GTP hydrolysis is more important for INT
250 complexes with fusidic acid, suggesting that EF-G stabilized by fusidic acid does not represent the n
251 Despite numerous studies suggesting that EF-G undergoes extensive conformational rearrangements d
254 the most significant difference between the EF-G.GTPase activities of vacant and translocating ribos
255 ameshift promoting signals mostly impair the EF-G-catalyzed translocation step of the two tRNALys and
256 the same orientation, while domain II in the EF-G-containing 50S subunit is extensively rotated (appr
257 pery sequence also helps dissociation of the EF-G by providing alternative base-pairing options.
258 formational transitions that are part of the EF-G functional cycle during ribosome translocation.
259 hat the pretranslocation conformation of the EF-G-ribosome complex is significantly less stable than
268 , EF4 showed chemical protections similar to EF-G and stabilized a ratcheted state of the 70S ribosom
269 ough structurally similar to the translocase EF-G, promotes back-translocation of tRNAs on the riboso
271 nd to the ribosome and induce translocation, EF-G*GDP in complex with phosphate group analogs BeF3(-)
274 t bacterial trGTPases, including IF2, EF-Tu, EF-G and RF3, play well-known roles in translation.
276 on of plastid-encoded proteins (e.g., EF-Tu, EF-G, and mRNA binding proteins) and thylakoid formation
278 examine such changes during single-turnover EF-G-dependent GTPase on vacant ribosomes and to elucida
279 with the mRNA stimulatory elements uncouple EF-G catalysed translocation from normal ribosomal subun
281 e mutant ribosomes were affected in in vitro EF-G-dependent GTP hydrolysis but all showed resistance
283 from the POST to PRE state is observed when EF-G is depleted from ribosomes in the POST state or whe
284 NA or only a single tRNA, or complexes where EF-G was directly bound to ribosomes in the posttransloc
287 somal conformational changes associated with EF-G dissociation upon unsuccessful translocation attemp
289 tion conformation of the ribosome bound with EF-G and A-site tRNA has evaded visualization owing to t
291 mus thermophilus 70S ribosome complexed with EF-G, RRF and two transfer RNAs at a resolution of 3.5 a
292 le for thiostrepton to compete directly with EF-G.GDP for binding to the L11-RNA complex, and provide
294 rmine the structure of the 70S ribosome with EF-G, which is trapped in the pretranslocation state usi
295 c) each bind to two sites per ribosome, with EF-G having considerably higher second-site affinity tha
297 trom resolution of the ribosome trapped with EF-G in the posttranslocational state using the antibiot
298 ransmission of conformational changes within EF-G by which FA prevents release of EF-G from the ribos
300 0.5) cryo-electron microscopy map of a 50S x EF-G x guanosine 5'-[(betagamma)-imido]triphosphate x RR