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1 Tet triple KO fibroblast derived from mouse ES cells.
2 ns between LIF-independent iOCT4 and control ES cells.
3 ty as well as the developmental potential of ES cells.
4 GC-like cells (PGCLCs) in EpiLCs, but not in ES cells.
5 g the levels of expression driven by CREs in ES cells.
6 ssion in murine Mesp1(Cre/+); Rosa26(EYFP/+) ES cells.
7 ntrol and L1CAM-deficient neurons from these ES cells.
8 ues the differentiation defects of aneuploid ES cells.
9 so contributes to the rapid proliferation of ES cells.
10 nt promoter genes were reduced in BAF250a KO ES cells.
11 3K79me2, H3K36me3, H3K9me3, and H4K20me3, in ES cells.
12 which are de-repressed in SUV420H2 knockout ES cells.
13 d promoters were bivalent in human and mouse ES cells.
14 0H2 in regulating the chromatin landscape of ES cells.
15 -scale chromatin interactions in pluripotent ES cells.
16 omote de novo methylation in differentiating ES cells.
17 ocesses that establish healthy pregnancy and ES cells.
18 essential for the proper differentiation of ES cells.
19 anisms in human prostate cancer versus mouse ES cells.
20 e of the most rapidly induced transcripts in ES cells.
21 l to the pluripotency and differentiation of ES cells.
22 rons derived from these conditionally mutant ES cells.
23 g wild-type Lsh but not the ATP mutant in KO ES cells.
24 enes or more) after a single transfection of ES cells.
25 ased targeting vectors introduced into mouse ES cells.
26 ensable for global gene expression in murine ES cells.
27 l-safe mechanism to prevent Xist activity in ES cells.
28 us 129SvJ/Mus castaneous (CAS) hybrid female ES cells.
29 ongation, and alternative splicing events in ES cells.
30 h may support the diverse mRNA repertoire in ES cells.
31 hment XCI during in vitro differentiation of ES cells.
32 a genome-wide basis in differentiating mouse ES cells.
33 regulated in Drosha- but not Dicer-deficient ES cells.
34 RNAPII elongation rates and RNA splicing in ES cells.
35 strongly suppressed in mouse embryonic stem (ES) cells.
36 hd9, Brg1 and Ep400 in mouse embryonic stem (ES) cells.
37 ration and survival of mouse embryonic stem (ES) cells.
38 ed their expression in mouse embryonic stem (ES) cells.
39 s of the HH pathway in mouse embryonic stem (ES) cells.
40 and TAD boundaries in mouse embryonic stem (ES) cells.
41 s in early mouse embryos and embryonic stem (ES) cells.
42 critical for self-renewal in embryonic stem (ES) cells.
43 expression programs in mouse embryonic stem (ES) cells.
44 but not in undifferentiated embryonic stem (ES) cells.
45 st RNA is unspliced in naive embryonic stem (ES) cells.
46 1, at bivalent loci in human embryonic stem (ES) cells.
51 osome inactivation and XIST transcription in ES cells, also plays a role in maintenance of the inacti
52 ethodology that utilizes the differentiating ES cell and embryoid body system to define the modules a
53 analysis revealed that LIF-independent iOCT4 ES cells and control ES cells exhibit similar transcript
54 n, we purified native nucleosomes from mouse ES cells and detect that Suv39h1 and Suv39h2 exclusively
55 K27me3) of ChIP sequencing datasets in human ES cells and eight pairs in murine ES cells, and predict
56 de changes in NANOG-binding patterns between ES cells and EpiLCs, indicating epigenetic resetting of
58 (TRIM28; also known as TIF1beta and KAP1) in ES cells and orchestrates retroviral silencing activity
59 se phenotypes were mimicked by SHANK3-edited ES cells and rescued by transduction with a Shank3 expre
60 Pausing can be induced directly in cultured ES cells and sustained for weeks without appreciable cel
61 sing quantitative live-cell imaging in mouse ES cells and tumor cells, we demonstrate that, although
62 9 trimethylation (H3K9me3) profiles in mouse ES cells and uncovered two distinct classes of SETDB1 bi
63 s involved in maintenance of embryonic stem (ES) cells and early embryonic development of the mouse.
64 trophoblast stem (TS) cells, embryonic stem (ES) cells and extra-embryonic endoderm stem (XEN) cells
65 omatin interactions in human embryonic stem (ES) cells and four human ES-cell-derived lineages, we un
66 lentiviral vector in murine embryonic stem (ES) cells and human inducible pluripotent stem (iPS) cel
69 L4 enzyme-dead knock-in (KI) embryonic stem (ES) cells and mice, which carry Y5477A/Y5523A/Y5563A mut
71 re malignant counterparts of embryonic stem (ES) cells and serve as useful models for investigating c
72 fferentiation of mouse embryonic stem cells (ES cells) and pre-implantation embryos towards primitive
74 in human ES cells and eight pairs in murine ES cells, and predicted high-confidence (HC) bivalent pr
75 precise control of the forces experienced by ES cells, and therefore provided at least one explanatio
76 promoter region are lost in embryonic stem (ES) cells, and ES-cloned embryos show RNF12-dependent Xi
77 o compare the gene expression profile of the ES cell- and adult progenitor-derived, GM-CSF-instructed
78 oduce the dramatic rearrangements underlying ES-cell- and PGC-specific transcriptional programs remai
83 infer that the functions of embryonic stem (ES) cells are most active initially and may gradually fa
84 the three-dimensional chromatin landscape of ES cells, as loss of SUV420H2 resulted in A/B compartmen
85 gramming in which repression of pre-existing ES cell-associated gene expression program is followed b
87 of BAF250a, a key regulatory subunit of the ES cell ATP-dependent Brahma-associated factor (BAF) chr
89 udy presents a high-throughput and versatile ES cell-based mouse modeling platform that can be combin
90 ing involves labor-intensive embryonic stem (ES) cell-based gene targeting and tedious micromanipulat
91 such models are generated by embryonic stem (ES) cell-based targeted insertion, or pronuclear injecti
92 ly, we find the strongest gene clustering in ES cells between transcription factor genes that control
93 appear to retain "stem"-related functions of ES cells but exhibit unique signatures supporting roles
94 enes that are transcriptionally repressed in ES cells but ready to be activated in response to differ
95 ficient to support enhanced proliferation of ES cells, but not to maintain their undifferentiated phe
96 t characteristics similar to embryonic stem (ES) cells, but the genetic drivers underlying malignant
97 a disrupted the differentiation potential of ES cells by altering the expression timing of key develo
98 at ERK reversibly regulates transcription in ES cells by directly affecting enhancer activity without
99 fects of aneuploidy on mouse embryonic stem (ES) cells by generating a series of cell lines that each
100 HDR-mediated events in mouse embryonic stem (ES) cells by more than 20-fold through the use of co-inc
104 rogrammed STAP cells, unlike embryonic stem (ES) cells, can contribute to both embryonic and placenta
105 Here, we generated human embryonic stem (ES) cells carrying a conditional L1CAM loss-of-function
106 m, Aldh1l1(-/-) mice were generated using an ES cell clone (C57BL/6N background) from KOMP repository
107 alyzing two independent conditionally mutant ES cell clones, we found that deletion of L1CAM dramatic
108 ndings highlight a unique mechanism by which ES cells communicate with trophoblasts within the blasto
109 we found distinct nucleosome occupancy in KO ES cells compared to WT ES cells after differentiation.
111 The induction of telomere dysfunction in ES cells, consistent with somatic deletion of Trf2 (also
115 ly similar to those of their embryonic stem (ES) cell counterparts, and both are typical of aneural m
116 on of the Romk1-specific first exon using an ES cell Cre-LoxP strategy and examined the renal phenoty
119 ts long-term LIF-independent self-renewal of ES cells cultured in media containing fetal bovine serum
120 , in which naive pluripotent embryonic stem (ES) cells cultured in basic fibroblast growth factor (bF
121 factor 4) plays an unappreciated role in the ES cell cycle by forming a complex with cyclin-Cdk1 and
122 educes endogenous H3K4 methylation levels in ES cells, decreases the protein stability of MLL3 and ML
123 RECQL5 and BLM has on mouse embryonic stem (ES) cells deleted for FANCB, a member of the FA core com
125 Here we demonstrate that embryonic stem (ES) cells derived from the ICM generate and shed microve
126 iPS cells and nuclear transfer ES cells (NT ES cells) derived by somatic cell nuclear transfer (SCNT
128 to steer directional differentiation because ES cell-derived cells are typically immature with impair
129 istent with this notion, we found that mouse ES cell-derived DCs (ES-DCs) represented less mature cel
130 etry, microscopic imaging, and RNA-Seq, that ES cell-derived macrophages responded to S. Typhimurium,
131 eproducible strategy to exponentially expand ES cell-derived megakaryocyte-erythroid progenitors that
132 ously using fetus-derived NPCs, infection of ES cell-derived pNSCs with HCMV was nonprogressive.
137 man embryonic stem (ES) cells and four human ES-cell-derived lineages, we uncover extensive chromatin
140 We found that hemangiogenic progenitors from ES cells develop through intermediate gastrulation stage
143 is one of the most rapidly induced genes in ES cell differentiation and it is the earliest expressed
145 oth the mRNA and protein levels during mouse ES cell differentiation into SMCs (ESC-SMC differentiati
154 renewal of pluripotent mouse embryonic stem (ES) cells downstream of the cytokine leukemia inhibitory
157 derivation of somatic motoneurons (MNs) from ES cells (ESCs) after exposure to sonic hedgehog (SHH) a
158 from mutant p53-induced transformation using ES cells (ESCs) that express a conformational mutant of
160 occupancy of pluripotency-associated loci in ES cells, Esrrb sustains the stemness of TS cells by dir
164 t LIF-independent iOCT4 ES cells and control ES cells exhibit similar transcriptional programs relati
167 eight genes including Braf, Mitf, and ERas (ES-cell expressed Ras) as candidate resistance genes.
168 ansferase SUV420H2 regulates embryonic stem (ES) cell fate by patterning the epigenetic landscape.
169 d using the data to deconvolute a mixture of ES cells, fibroblasts and hematopoietic progenitors into
170 uld aid efforts to generate autologous human ES cells for regenerative applications, as donated or di
173 pulation has yielded haploid embryonic stem (ES) cells from several mammalian species, but haploid hu
174 gulates pivotal transcription factors in the ES cell gene regulatory network to sustain naive identit
177 Here we show that mouse embryonic stem (ES) cells grown under conditions that maintain naive plu
178 or expression of a functional RNAi-cassette, ES-cell handling, or screening for mice with the desired
180 n vitro-differentiated human embryonic stem (ES) cells have provided unprecedented information on the
182 although short-term suppression of Mek1/2 in ES cells helps to maintain an ICM-like epigenetic state,
183 f a unique stem cell phenotype by both human ES cells (hESCs) and induced pluripotent stem cells (iPS
185 he absence of proliferation (embryonic stem [ES] cell heterokaryons) or DNA replication (nuclear tran
190 modification and primary differentiation of ES cells in 2i or 2i+LIF media without serum or undefine
191 we show that prolonged culture of male mouse ES cells in 2i/L results in irreversible epigenetic and
194 s unclear how sustained propagation of naive ES cells in vitro affects their stability and functional
195 irst' allele and identify essential genes in ES cells, including the histone methyltransferase Setdb1
196 ption factors in common with embryonic stem (ES) cells, including OCT4 (encoded by Pou5f1), SOX2, NAN
197 urther show that injecting MVs isolated from ES cells into blastocysts results in an increase in thei
199 e genetically modified mouse embryonic stem (ES) cells into functional macrophages provides a potenti
200 monolayer cultures of mouse embryonic stem (ES) cells into PSM-like cells without the introduction o
201 ethod, genetically matched sets of human IVF ES cells, iPS cells and nuclear transfer ES cells (NT ES
202 Our strategy to generate null mutant mouse ES cells is applicable to thousands of genes and repurpo
205 that using engineered human embryonic stem (ES) cells is a viable approach to studying disease-assoc
209 We constructed a homozygous mutant mouse ES cell line in the Traf2 gene that is known to play a r
212 operties, we used a modified embryonic stem (ES) cell line that emulates the early embryonic demethyl
213 engineered a new transgenic embryonic stem (ES) cell line, where eGFP expression is driven by the re
214 ndrial localization of MRP-1 was examined in ES cell lines by differential centrifugation and membran
216 es in an allele-specific manner using hybrid ES cell lines from reciprocal crosses between C57BL/6J a
217 alysed a collection of human parthenogenetic ES cell lines originating from haploid oocytes, leading
218 differentiation competence is more common in ES cell lines than in induced pluripotent stem cell line
222 ) drives TE-like transcriptional programs in ES cells, maintains trophoblast stem (TS) cell self-rene
223 phectoderm (TE) lineage by repression of the ES cell master regulator Oct4 or activation of the TE ma
225 ring the onset of Hox gene expression in the ES cell model and during body segment identity specifica
226 IVF ES cells, iPS cells and nuclear transfer ES cells (NT ES cells) derived by somatic cell nuclear t
227 ot mutually exclusive within embryonic stem (ES) cell NuRD and, despite subtle differences in chromat
229 We found a strong dependency of TRF2-null ES cells on the telomere-associated protein POT1B and on
230 dress this issue, we cultured Ewing sarcoma (ES) cells on electrospun poly(epsilon-caprolactone) 3D s
231 ion mouse embryos, or by conversion of mouse ES cells or induced pluripotent stem (iPS) cells reprogr
232 d that co-culture of wild-type and aneuploid ES cells or supplementation with extracellular BMP4 resc
234 nd PRC2 reveals a novel mechanism underlying ES cell pluripotency and differentiation regulation.
238 pose that after the dissolution of the naive ES-cell pluripotency network during establishment of Epi
240 ese functions, we used mouse embryonic stem (ES) cells, primary neurons, and APOE3 and APOE4 mice tre
241 gene profiles in multiple SCC cell lines to ES cell profiles and determined that SOX2 binds to disti
242 more, we found that a PKA inhibitor impaired ES cell proliferation, tumor growth and metastasis, whic
243 In contrast, pluripotent embryonic stem (ES) cells represent an inexhaustible source for DC produ
245 on of Tet1 and Tet2 in mouse embryonic stem (ES) cells results in an apparent loss of H3K27me3 at biv
247 dx2-eGFP cells compared with embryonic stem (ES) cells reveal that they appear to retain "stem"-relat
250 SALL4, a gene involved in the maintenance of ES cell self-renewal, is aberrantly expressed in 47.7% o
252 ription factor implicated in embryonic stem (ES) cell self-renewal, yet its knockout causes intrauter
253 ith cell-permeable alphaKG directly supports ES-cell self-renewal while cell-permeable succinate prom
254 is study demonstrates shear stress-dependent ES cell sensitivity to dalotuzumab, highlighting the imp
257 changes using inducible CDX2 embryonic stem (ES) cells, so that we could predict which CDX2-bound gen
258 However, it is not known whether there are ES cell-specific mechanisms regulating mitotic fidelity.
262 drive their own expression and maintain the ES cell state; if their binding is lost, the ability to
266 duces a naive state in mouse embryonic stem (ES) cells that resembles the inner cell mass (ICM) of th
267 se model cell line and mouse embryonic stem (ES) cells that this library can be used for genetic resc
268 e all-trans-retinoic acid (RA)-responsive in ES cells, the downstream promoter contains a half-site R
271 used successfully in murine embryonic stem (ES) cells, there remain a set of nearly two thousand gen
272 2 and NANOG promote the pluripotent state in ES cells, they show contrasting roles in EpiLCs, as Sox2
273 sequencing of in vitro-differentiated mouse ES cells to capture the continuous developmental process
274 extensive demethylation, we subjected mouse ES cells to chemically defined hypomethylating culture c
275 n a rate-dependent manner the sensitivity of ES cells to IGF-1R inhibitor dalotuzumab (MK-0646) and s
276 s, cohesin depletion enhanced the ability of ES cells to initiate somatic cell reprogramming in heter
277 a for the in vitro differentiation of murine ES cells to macrophages and cardiomyocytes, with dynamic
278 states are vital for the differentiation of ES cells to multipotent stem cells, little is known rega
280 the differentiation of mouse embryonic stem (ES) cells to both primitive and definitive haematopoieti
282 this link, we have used NOD embryonic stem (ES) cells to generate a novel NOD transgenic line with t
285 in from the inner cell mass, embryonic stem (ES) cells undergo differentiation to the trophectoderm (
287 mparison to more differentiated cells, naive ES cells utilize both glucose and glutamine catabolism t
290 t control this unique DNA damage response in ES cells, we performed a CRISPR-Cas9-knockout screen.
292 equired for Neil1 protein stability in mouse ES cells, whereas it regulates NEIL1 transcription in th
293 ablish the poised chromatin configuration in ES cells, which is essential for the proper differentiat
294 d c-Myc (Myc) expression in cohesin-depleted ES cells, which promoted DNA replication-dependent repro
295 that uses the immense regenerative power of ES cells while avoiding the risks associated with direct
296 ncreases the level of global H2Bub1 in mouse ES cells, while down-regulation of Fbxl19 reduces the le
298 i-MEFs) derived from DNA-hypomethylated 2i/L ES cells with genetic ablation of Dnmt3a or Dnmt3b.
299 Here we generated mouse embryonic stem (ES) cells with a constitutive endogenous Nf1 exon 23a in