ライフサイエンスコーパス: Firmicutes

1 tion and obligate anaerobe enrichment (e.g., Firmicutes).

2 sociated with body mass index (Bacteroidetes/Firmicutes).

3 lineage within the order Bacillales (phylum Firmicutes).

4 ia, and finally Bacteroidetes/Proteobacteria/Firmicutes.

5 mercially important members of the low G + C Firmicutes.

6 plicated in interbacterial competition among Firmicutes.

7 iome, a polymicrobial community dominated by Firmicutes.

8 be produced by a thermophilic member of the Firmicutes.

9 canonical type domains are widespread among Firmicutes.

10 ed by the bacterial phyla Proteobacteria and Firmicutes.

11 eral families belonging to Bacteroidetes and Firmicutes.

12 report on comprehensive analysis of P450s in Firmicutes.

13 se mechanisms control spore formation in the Firmicutes.

14 a large number of cell wall proteins in the Firmicutes.

15 was reduced in women with low Bacteroidetes:Firmicutes.

16 re peptide pheromone receptors ubiquitous in Firmicutes.

17 ile vancomycin promoted the expansion of the Firmicutes.

18 d associated with CD-specific alterations in Firmicutes.

19 and belongs to the Ruminococcaceae family of Firmicutes.

20 tive set of active microorganisms, primarily Firmicutes.

21 hly conserved from the Proteobacteria to the Firmicutes.

22 is a major regulator of stress responses in Firmicutes.

23 in particular, the selection for the phylum Firmicutes.

24 and syntrophic, acetogenic, and fermentative Firmicutes.

25 ric bacteria and a few species in the phylum Firmicutes.

26 quences belonged to Bacteroidetes and 41% to Firmicutes.

27 t bacterial species differed, especially the Firmicutes.

28 tinal enrichment of bacteria from the phylum Firmicutes.

29 ad characteristic disturbances of the phylum Firmicutes.

30 ation in B. subtilis and other spore-forming Firmicutes.

31 he bacterial species belonging to the phylum Firmicutes.

32 pronounced in L. monocytogenes than in other Firmicutes.

33 R family members in other Proteobacteria and Firmicutes.

34 as enriched in Bacteroidetes but depleted of Firmicutes.

35 ndance of Actinobacteria, Bacteroidetes, and Firmicutes.

36 uitous in Bacilli, a major monoderm class of Firmicutes.

37 lly transferred to the Korarchaeota from the Firmicutes.

38 followed by Bactroidetes (13.99% +/- 0.29), Firmicutes (11.45% +/- 0.51), Actinobacteria (10.21% +/-

39 ting 74.8% of the 16S sequences, followed by Firmicutes (12.0%), Proteobacteria (10.4%), Verrucomicro

40 rs of the phyla Proteobacteria (14% to 68%), Firmicutes (26% to 41%), Actinobacteria (6 to 23%) and B

41 rial phyla, led by Bacteroidetes (51.2%) and Firmicutes (27.1%), and 94 genera were represented prima

42 carious lesions, Actinobacteria (35.8%) and Firmicutes (31.2%) were the most prevalent phyla, follow

43 eas in digesta both Proteobacteria (47%) and Firmicutes (38%) showed high abundance.

44 7) was associated with higher proportions of Firmicutes (43.8% x 38.5%, P = 0.05).

45 In contrast, Firmicutes (47% vs 63%, P = .17) and Actinobacteria (10%

46 t microbiotas were dominated by three phyla: Firmicutes (62.9%), Proteobacteria (29.9%) and Fusobacte

47 nt phyla present in bushmeat samples include Firmicutes (67.8%), Proteobacteria (18.4%), Cyanobacteri

48 d the predominance in swine facility dust of Firmicutes (70%) at the phylum level, Clostridia (44%) a

49 units (OTUs, 97% similarity), primarily from Firmicutes (92.6%) and Proteobacteria (6.9%), via 16S rR

50 Firmicutes abundance declined from HDC to MAH to SAH (63

51 ncultivated clades related to Bacteroidetes, Firmicutes, Actinobacteria and Chloroflexi were ubiquito

52 epresentatives from the phyla Bacteroidetes, Firmicutes, Actinobacteria and Proteobacteria.

53 ltered abundances in the phyla Fusobacteria, Firmicutes, Actinobacteria and Proteobacteria.

54 p-GMK interaction is conserved in members of Firmicutes, Actinobacteria, and Deinococcus-Thermus, but

55 was comprised mostly of the bacterial phyla Firmicutes, Actinobacteria, and Proteobacteria.

56 dance of Proteobacteria, higher abundance of Firmicutes, along with enriched bacterial genus diversit

57 Many Gram-positive Firmicutes also have N-acylated lipoproteins, but the en

58 lysis suggests that this may be common among Firmicutes and 30% of all bacteria.

59 to an increase in abundance of Gram-positive Firmicutes and a concurrent decrease in Gram-negative Ba

60 However, examination of Firmicutes and Actinobacteria reveals that PspA ortholog

61 In addition, Firmicutes and Actinobacteria were also the abundant phy

62 milk in phyla Proteobacteria, Bacteroidetes, Firmicutes and Actinobacteria with an inclusion of 68.04

63 as associated with a significant increase of Firmicutes and Actinobacteria, and a decrease of Bactero

64 thogens and opportunistic pathogens from the Firmicutes and Actinobacteria, which exhibit a Gram-posi

65 g Deltaproteobacteria, as well as uncultured Firmicutes and Actinobacteria.

66 ear, especially reduced exposure to specific Firmicutes and Bacteriodetes, was associated with atopy

67 t Gram-positive bacteria affiliated with the Firmicutes and Bacteroidetes dominated in the post-reduc

68 l model for polysaccharide hydrolysis by the Firmicutes and Bacteroidetes in the thermophilic cellulo

69 f strict anaerobic bacteria belonging to the Firmicutes and Bacteroidetes phyla.

70 s are dominated by bacteria belonging to the Firmicutes and Bacteroidetes phyla.

71 obligate anaerobic bacteria, with ratios of Firmicutes and Bacteroidetes similar to those observed i

72 nera were identified from all fecal samples; Firmicutes and Bacteroidetes were the most dominant phyl

73 In the bacterial phyla Firmicutes and Bacteroidetes, xanthine phosphoribosyltra

74 al communities in kogiid whales dominated by Firmicutes and Bacteroidetes.

75 d changes occurred at the level of phylum in Firmicutes and Bacteroidetes.

76 in the microbiome, with a marked decrease of Firmicutes and Bacteroidetes.

77 lesterol, intestinal and plasma LPC18:1, and Firmicutes and Cyanobacteria with plasma LPC 18:1.

78 , we identify AcrIIA1(NTD) homologs in other Firmicutes and demonstrate that they have been co-opted

79 Firmicutes and Enterobacteriaceae abundances were associ

80 e Romanian adolescents had more sequences in Firmicutes and fewer in Actinobacteria phyla and more se

81 ous in genomes from the Gram-positive phylum Firmicutes and in some Gram-negative bacteria.

82 rkably, we observed a decreased abundance of Firmicutes and increased abundance of Proteobacteria - a

83 vel diversity comparisons revealed decreased Firmicutes and increased Proteobacteria in ulcerated sit

84 FXR KO also had reduced Firmicutes and increased Proteobacteria, which could be

85 ic Proteobacteria and decreases in anaerobic Firmicutes and Melainabacteria in the murine foregut and

86 teria were the dominant Hg-methylators while Firmicutes and methanogenic Archaea were typically ~50%

87 filiated with Actinobacteria, Bacteroidetes, Firmicutes and Proteobacteria (especially Roseobacter of

88 ith a reduction in the relative abundance of Firmicutes and Proteobacteria after treatment.

89 On day 4 the proportion of the phylum Firmicutes and Proteobacteria in stool was significantly

90 used marked dysbiosis, with expansion of the Firmicutes and Proteobacteria phyla, near elimination of

91 Abundances of dominant phyla (Bacteroidetes, Firmicutes and Proteobacteria) were similar.

92 CHX significantly increased the abundance of Firmicutes and Proteobacteria, and reduced the content o

93 ated with either enrichment or reductions of Firmicutes and Proteobacteria, respectively, at a false

94 24-7 and Bacteroidaceae was reduced, whereas Firmicutes and Proteobacteria, such as Ruminococcaceae,

95 hree phyla common in the gut--Bacteroidetes, Firmicutes and Proteobacteria--as well as one aerobic pa

96 tes and Fusobacteria, and AMH showing higher Firmicutes and Proteobacteria.

97 onging to the Actinobacteria, Bacteroidetes, Firmicutes and Proteobacteria.

98 ated with the dust was low, but dominated by Firmicutes and Proteobacteria.

99 oth gastrointestinal sites were dominated by Firmicutes and Proteobacteria.

100 striction in the progression phase increased Firmicutes and reduced Bacteroidetes compared to a high-

101 In Firmicutes and related bacteria, ribosomal large subunit

102 ponents and their homologs in homoacetogenic Firmicutes and Spirochaetes suggests that the deltaprote

103 We found that Firmicutes and Spirochaetes were the most abundant phyla

104 owed a positive relationship with percent of Firmicutes and Streptococcus and a negative association

105 Diet-enriched Firmicutes and their products were sufficient to increas

106 and Proteobacteria, but fewer Bacteroidetes, Firmicutes and Verrumicrobia.

107 the low-G+C group of Gram-positive bacteria (Firmicutes) and requires signature sporulation genes tha

108 Gs were mostly found in Clostridia, Bacilli (Firmicutes), and in alpha and beta Proteobacteria.

109 , Bacteroidetes, Actinobacteria, Chlamydiae, Firmicutes, and Acidobacteria.

110 s, with phyla Proteobacteria, Bacteroidetes, Firmicutes, and Actinobacteria being most abundant.

111 At school age, many new Actinobacteria, Firmicutes, and Bacteroidetes bacterial taxa emerged.

112 characterized fusobacteria, proteobacteria, firmicutes, and bacteroidetes.

113 the phyla of Proteobacteria, Actinobacteria, Firmicutes, and Cyanobacteria in bacteria and the phylum

114 vels of total bacterial load, Bacteroidetes, Firmicutes, and Enterobacteriaceae were mostly similar,

115 d by inversely correlated Proteobacteria and Firmicutes, and exhibited discrete compositional pattern

116 ng diverse clades, including Proteobacteria, Firmicutes, and Methanomicrobia, with Deltaproteobacteri

117 sals from the Actinobacteria, Bacteroidetes, Firmicutes, and Proteobacteria phyla, we found that pote

118 in phyla in all samples were Actinobacteria, Firmicutes, and Proteobacteria.

119 lope that was present in the ancestor of the Firmicutes, and that the monoderm phenotype in this phyl

120 Spx-family proteins are highly conserved in Firmicutes, and the L. monocytogenes genome contains two

121 mouth, including members of the Bacteroides, Firmicutes, and TM7 phyla, while airway microbiota were

122 a profile characterized by the expansion of Firmicutes (appearance of Erysipelotrichi), Proteobacter

123 The Firmicutes are a phylum of bacteria that dominate numero

124 Firmicutes are reduced in the intestinal microbiota of p

125 nserved in other amidases from Gram-positive Firmicutes, are pivotal for enzymatic activity.

126 where GlgC and GlgD proteins found in other Firmicutes arrange in distinctive clusters.

127 decreased Actinobacteria, Cyanobacteria, and Firmicutes as well as a reduced diversity in microbiome.

128 a, a reduced ratio between Bacteroidetes and Firmicutes, as well as a dramatic increase of Gram-negat

129 iety of Gram-positive bacteria in the phylum Firmicutes, as well as Escherichia coli with a compromis

130 RISPRi in gammaproteobacteria and Bacillales Firmicutes at the individual gene scale, by examining dr

131 e classes of low-G+C Gram-positive bacteria (Firmicutes), Bacilli, Clostridia and Negativicutes, incl

132 tance against antimicrobial peptides in many Firmicutes bacteria is mediated by detoxification system

133 Firmicutes bacteria produce metabolites that maintain th

134 rium acetylicum, a representative intestinal Firmicutes bacterium that is intractable to molecular ge

135 d significant differences in beta diversity, Firmicutes/Bacteroides (F/B) ratio, and increase of Verr

136 Persistent bacterial groups belonging to Firmicutes, Bacteroidetes and Actinobacteria were presen

137 icrobiomes were dominated by Proteobacteria, Firmicutes, Bacteroidetes and Fusobacteria bacteria, whi

138 tation selected for three dominant taxa--the Firmicutes, Bacteroidetes and Thermus.

139 from NHB and NHW women (n = 64), with fewer Firmicutes, Bacteroidetes, and Actinobacteria.

140 revealed that the dominant phyla related to Firmicutes, Bacteroidetes, and Proteobacteria accelerate

141 lm material produced by members of the phyla Firmicutes, Bacteroidetes, and Proteobacteria.

142 heless, both shared a dominance of the phyla Firmicutes, Bacteroidetes, and Proteobacteria.

143 Results showed that relative abundances of Firmicutes, Bacteroidetes, Enterococcus, Enterobacteriac

144 Here we show that the ratio of Firmicutes/Bacteroidetes (F/B ratio) and intestinal proi

145 and E2 treatment did not affect the ratio of Firmicutes/Bacteroidetes (F/B).

146 The gut microbiome Firmicutes/Bacteroidetes ratio decreased with exercise a

147 ction (CDI) are both related to an increased Firmicutes/Bacteroidetes ratio in the intestinal microbi

148 howed 35.4, 89.2, and 60.0% reduction in the Firmicutes/Bacteroidetes ratio than the S-raised pigs at

149 The Firmicutes/Bacteroidetes ratio was increased by LPS in S

150 community of LCR rats, resulting in a lower Firmicutes:Bacteroidetes ratio.

151 ld for syntrophic propionate oxidation, with Firmicutes being replaced by Bacteroidetes.

152 Some Firmicutes (belonging to the genus Bacillus and Sporosar

153 oral bacteria (e.g., Bacteroides, Bacillus, Firmicutes, beta-proteobacteria, and Spirochetes) were s

154 ur predominantly in bifidobacteria and a few Firmicutes but lack in other HGMs.

155 ulosiruptorand among other biomass-degrading Firmicutes but missing from Caldicellulosiruptor bescii

156 correlated with increased Bacteroidetes and Firmicutes but reduced Clostridium.

157 d for pulcherriminic acid synthesis in other Firmicutes but the patchwork presence both within and ac

158 6% of bacterial colonizers after 1 week were Firmicutes, but by 7 weeks Actinobacteria and Bacteroide

159 depleted of all phyla with the exception of Firmicutes, but doxycycline treatment had minimal effect

160 erobiales belong to the classically monoderm Firmicutes, but possess outer membranes with lipopolysac

161 nserved within certain bacterial phyla, e.g. Firmicutes, but show different patterns in other phyloge

162 EP class inhibit the growth of Gram-positive firmicutes by activating ClpP and causing unregulated pr

163 and the relative abundances were higher for Firmicutes, Chloroflexi and Crenarchaeota, but lower for

164 d IL-17/IL-22-related declines in the phylum Firmicutes, class Clostridia, and order Clostridiales Th

165 ial profile was dominated by two main phyla, Firmicutes, closely followed by Bacteroidetes.

166 e halotolerant bacterial genus in the phylum Firmicutes, commonly found in various habitats in Antarc

167 Bacterial taxa within Clostridia and Firmicutes could be studied as probiotic candidates for

168 erial taxa in ileal effluents and especially Firmicutes, could be used to discriminate between nonrej

169 m 1% to 46% with monensin, but gram-positive Firmicutes decreased from 93% to 46%.

170 In Firmicutes, degradative capacity is largely restricted t

171 inant gut bacterial phyla, Bacteroidetes and Firmicutes, did not differ between participants with gre

172 We propose that in some Firmicutes DMB is activated to alpha-RP via alpha-R usin

173 of the stool microbiota, transitioning from Firmicutes dominant to Bacteroidetes dominant.

174 control mucosally associated microbiota were Firmicutes-dominant, whereas WT TPN mice were Proteobact

175 obacteria dominated in immature stages while Firmicutes dominated in adult stages.

176 iated with increased mortality compared with Firmicutes-dominated or balanced microbiome profiles (ha

177 analyses identify 12 taxa, 11 in the phylum Firmicutes, eight of which are positively associated wit

178 In bacteria, the Firmicutes encode conserved Spx-family transcriptional r

179 ipation were highest in individuals with the Firmicutes-enriched enterotype.

180 ate producers), together with a reduction in Firmicutes (especially due to lower Lachnospiraceae popu

181 age, body mass index, and diet; genera from Firmicutes (Faecalibacterium, Lactococcus, and Roseburia

182 e of facultative anaerobic taxa of the phyla Firmicutes (families Ruminococcaceae and Turicibacterace

183 re, by screening 1,639 genomes of uncultured Firmicutes for signatures of an OM, we highlight a third

184 The class Clostridia in the phylum Firmicutes (formerly low-G+C Gram-positive bacteria) inc

185 eviously known, with examples throughout the Firmicutes, Fusobacteria and Proteobacteria.

186 ative abundance of dominant bacterial phyla (Firmicutes, Fusobacteria, Bacteriodetes, and Actinobacte

187 ase are reflected by the gammaProteobacteria:Firmicutes (gammaP:F) ratio.

188 w-onset patients had different levels of the Firmicutes genera Lactobacillus and Staphylococcus compa

189 her 3',5'-cAMP is universally present in the Firmicutes group of bacteria.

190 mmunity skewed towards a higher abundance of Firmicutes (> 59.2%) and Bacteroidetes (4.2-31.4%) withi

191 gativicutes, within the classically monoderm Firmicutes has blurred the monoderm/diderm divide and sp

192 ism of interbacterial antagonism utilized by Firmicutes has not been elucidated.

193 However, Firmicutes have a fundamentally different set of ribonuc

194 Herein, we show that the Actinobacteria and Firmicutes (high-GC and low-GC Gram-positive bacteria) a

195 acteria in healthy piglets, were replaced by Firmicutes in asymptomatic and diarrheal piglets.

196 the presence of oral Actinobacteria and oral Firmicutes in stool was positively correlated with subse

197 ture, decreased Bacteroidetes, and increased Firmicutes in the feces.

198 P = .047), with enrichment of Clostridia and Firmicutes in the infant gut microbiome of subjects whos

199 higher abundance of Bacteroidetes, and lower Firmicutes in the large intestine, along with lower leve

200 gher proportion of Bacteroidetes relative to Firmicutes in the soil group.

201 Spore-forming firmicutes include many environmentally important organi

202 F) sigma factor that is found exclusively in Firmicutes including Bacillus subtilis and the opportuni

203 Lineages of Firmicutes, including Clostridiales, have been frequentl

204 c-di-AMP controls the uptake of osmolytes in Firmicutes, including the human pathogen Listeria monocy

205 the presence of sporulation genes in various firmicutes, including those with smaller genomes than B.

206 Firmicutes increased sharply, whereas Proteobacteria, Ac

207 s in bacterial abundance including decreased Firmicutes, increased Bacteroidetes, and decreased Bifid

208 m in Lake Miers, and two distinct classes of Firmicutes inhabited East and West Lobe Bonney at depths

209 that L27 in Staphylococcus aureus and other Firmicutes is encoded with an N-terminal extension that

210 sensitive target for ADEP-activated ClpP in firmicutes, is not degraded in mycobacteria.

211 ex, composed of Clostridial taxa and several Firmicutes known to be protective in EAE.

212 l coabundance groups; the first dominated by Firmicutes (Lachnospiraceae/Clostridiales), the second b

213 Some Firmicutes lack CobT-type enzymes but have a two-protein

214 The most abundant phyla were Firmicutes [mean relative abundance (SD), 42.1% (10.1%)]

215 he diol dehydratase gene cluster (pduCDE) in Firmicutes metagenomes predicted from the 16S rRNA gene.

216 Firmicutes multidrug resistance inc18 plasmids encode pa

217 GOS and lactose were significant increase in Firmicutes, numerical in Actinobacteria, and numerical d

218 h different faecal inocula, while nine other Firmicutes OTUs showed > 5-fold enrichment in at least o

219 odes of rejection, the proportions of phylum Firmicutes (p < 0.001) and the order Lactobacillales (p

220 Firmicutes (P < 0.001) was the dominant phylum in MF pup

221 21 there was an increase in HOMIM scores of firmicutes (P </=0.001), fusobacteria (P = 0.003), prote

222 uminococcus (p-for-interaction = 0.007), and Firmicutes (p-for-interaction = 0.04) and effects on inf

223 er 176,000 protein families constituting the Firmicutes pan-proteome identify those that strongly cor

224 Proteobacteria and Firmicutes penetrated small intestinal villi, and flagel

225 ormal DNA pairs, while the Bacteroidetes and Firmicutes phyla were depleted in tumors.

226 e in the abundance of both Bacteriodetes and Firmicutes phyla, with a proportional increase in the gr

227 es belonging mainly to the Bacteroidetes and Firmicutes phyla.

228 TMF(-/-) mice leading to predominance of the Firmicutes phylum and a significantly higher abundance o

229 Taxonomy reveals an increase of Firmicutes phylum and Corynebacteriaceae family in MCT s

230 Members of the Firmicutes phylum comprised 39% of total sequences and w

231 rial sequences and showed an increase in the Firmicutes phylum in GOLD 4 patients versus all other gr

232 ks after birth, whereas many bacteria of the Firmicutes phylum were acquired at later times in infanc

233 rved microbial developmental strategy in the Firmicutes phylum wherein a progenitor cell that faces s

234 ition revealed a significant increase in the Firmicutes phylum with asthma that was associated with a

235 Bacillus subtilis and most species from the Firmicutes phylum, ThiI lacks the rhodanese domain that

236 o membranes on multiple occasions within the Firmicutes phylum.

237 marily by a paucity of phylotypes within the Firmicutes phylum.

238 lycan is absent, especially for the dominant Firmicutes phylum.

239 Samples were classified as Proteobacteria or Firmicutes (phylum level) and Haemophilus or Streptococc

240 m samples contained 5 major bacterial phyla: Firmicutes, Proteobacteria, Actinobacteria, Fusobacteriu

241 d predominance of Bacteroidetes, followed by Firmicutes, Proteobacteria, and Actinobacteria phyla.

242 cterial phylotypes across the Bacteroidetes, Firmicutes, Proteobacteria, and Actinobacteria, the four

243 five dominant bacterial phyla (Spirochaetes, Firmicutes, Proteobacteria, Fibrobacteres and Bacteroide

244 In the IBD group, Firmicutes, Proteobacteria, Verrucomicrobia, and Fusobac

245 the major low-molecular-weight thiol in the Firmicutes raises the possibility that BSH is involved i

246 sitive correlation between the Bacteroidetes:Firmicutes ratio and total dietary fiber intake but not

247 fiber consumption shifted the Bacteroidetes:Firmicutes ratio, increasing the relative abundance of B

248 with turf algae had higher Bacteroidetes-to-Firmicutes ratios and an elevated abundance of genes inv

249 corresponding to uncultured Lachnospiraceae (Firmicutes) related to Eubacterium xylanophilum and Buty

250 munity toward lower Bacteriodetes and higher Firmicutes, resembling changes in microbiota composition

251 piring microbes of the phyla Chloroflexi and Firmicutes, respectively.

252 undant in Proteobacteria, Actinobacteria and Firmicutes, respectively.

253 Taxa from the Firmicutes responded positively to AMF, while taxa from

254 Firmicutes scores were higher for infants born by C-sect

255 zebrafish larvae, elevating the abundance of Firmicutes sequences and reducing the abundance of Actin

256 groups XZ and JD than in group SPF, whereas Firmicutes showed the inverse pattern.

257 of putative GusR orthologs from GUS-encoding Firmicutes species also reveal functionally unique featu

258 Genome-wide analysis of P450s in 972 Firmicutes species belonging to 158 genera revealed that

259 lowed by 14% of Clostridia and 2.7% of other Firmicutes species, have P450s.

260 efficacy of SER-287, an oral formulation of Firmicutes spores, and the effects of vancomycin precond

261 bulk pH in the media allowed us to isolate a Firmicutes strain (Paenibacillus sp.).

262 ione is absent from the low-GC Gram-positive Firmicutes, such as Bacillus subtilis.

263 ia, particularly among facultative anaerobic Firmicutes, such as streptococci.

264 of Bacteroidetes and decreased abundance of Firmicutes, Tenericutes, Deferribacteres, and Spirochaet

265 and Bacteroides) and decreased the levels of Firmicutes that metabolize dietary plant polysaccharides

266 Gram-positive bacteria, and particularly the Firmicutes, the DNA-dependent RNA polymerase (RNAP) comp

267 Among the Firmicutes, the interactions were all competitive.

268 icted proteins is most similar to those from Firmicutes, the presence of key genes suggests a diderm

269 cteroides, and potentially Bacteroidetes and Firmicutes-the predominant BXD gut phyla.

270 ved in Rex orthologs identified in the phyla Firmicutes, Thermotogales, Actinobacteria, Chloroflexi,

271 Since scfCDE is conserved throughout Firmicutes, this work may contribute to the development

272 ent demonstrated a community transition from Firmicutes to a novel Bacteroidetes population that clus

273 ht loss, there is a decrease in the ratio of Firmicutes to Bacteroidetes phyla.

274 r, aged mice had a significant change in the Firmicutes to Bacteroidetes ratio with vancomycin treatm

275 ased gut dysbiosis, measured by the ratio of Firmicutes to Bacteroidetes, and increased the prevalenc

276 muciniphila and decreased the proportion of Firmicutes to Bacteroidetes, consistent with prior repor

277 ition, characterized by a decreased ratio of Firmicutes to Bacteroidetes, reduced Allobaculum bacteri

278 the gut microbiota by shifting the ratio of Firmicutes to Bacteroidetes.

279 t and a putative diversity maximum along the Firmicutes-to-Bacteroidetes axis.

280 ts fed the same high-fat diet, with a higher Firmicutes-to-Bacteroidetes ratio and significant genera

281 gut dysbiosis-as indicated by the decreased Firmicutes-to-Bacteroidetes ratios and endotoxin-bearing

282 om a predominance of Gammaproteobacteria and Firmicutes towards Bacteroidetes.

283 ds and other conjugative elements present in Firmicutes using the Listeria acrIIA1 gene as a marker.

284 Firmicutes was the most abundant phylum, and Corynebacte

285 Gammaproteobacteria and Firmicutes were consistently enriched from lab electroch

286 Overall, Firmicutes were found to account for 96% of amplified gu

287 iversity index and the relative abundance of Firmicutes were markedly reduced, whereas Proteobacteria

288 In contrast, several taxa from Firmicutes were more abundant in homes of individuals wi

289 The phyla Actinobacteria and Firmicutes were more abundant in the rhizosphere of newe

290 Women with a high ratio of Bacteroidetes to Firmicutes were more likely to be treated with UDCA (Fis

291 ypes belonging to the Ruminococcaceae in the Firmicutes were predominant in the methanogenic cultures

292 Firmicutes were the dominant phylum, and Staphylococcus

293 Based on microbiome sequencing, Firmicutes were the predominant bacterial group at the p

294 obacteria, Bacteroidetes, Cyanobacteria, and Firmicutes were the top five phyla identified from all s

295 and can be used in all related gram positive firmicutes which employ drastically different DNA replic

296 opmental phenotypes (including virulence) in Firmicutes, which includes common human pathogens, e.g.,

297 f steady state communities was enriched with Firmicutes, while the other was enriched with Bacteroide

298 unity was relatively simple and dominated by Firmicutes with 79% and 65% relative abundance for Meish

299 oromusa branch, which unifies members of the Firmicutes with Gram-negative-type cell envelopes, was r

300 of ABR genes and increased Bacteroidetes and Firmicutes with reduced Proteobacteria.