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1                                              HDAg exists in two forms, a small form (S-HDAg) and a la
2                                              HDAg was detected in MSG acinar, ductal, myoepithelial,
3                                              HDAg-L is identical to HDAg-S except that it bears a 19-
4                                              HDAg-L was found to colocalize with TAP and Aly in the n
5                                              HDAg-S is required for viral RNA replication, whereas HD
6 Ag-L farnesylation, we found that genotype 3 HDAg-L was inefficiently farnesylated when expressed in
7                                     Although HDAg is required for HDV replication, it is not known ho
8 eract with the N terminus of TAP, whereas an HDAg-L mutant lacking the NLS failed to interact with fu
9 primer extension (SHAPE) applied to free and HDAg-bound HDV RNAs indicated that the characteristic se
10 containing the 10-amino acid TAT peptide and HDAg-L(198-210), inhibited the interaction between HDAg-
11 ue to a weak interaction between the RNA and HDAg.
12 ongly on the relative amounts of HDV RNA and HDAg.
13     The roles of these two forms, HDAg-S and HDAg-L, are opposed.
14 We studied a single-centre cohort of 49 anti-HDAg-positive patients with HBsAg persistence for at lea
15  is associated with hepatitis delta antigen (HDAg) in cells replicating HDV.
16 mine the effects of hepatitis delta antigen (HDAg) on the ribozyme activities of HDV RNA in vivo.
17 rus-encoded protein hepatitis delta antigen (HDAg) perform essential roles in the viral life cycle, i
18 ture of HDV RNA and hepatitis delta antigen (HDAg), a basic, disordered, oligomeric protein.
19  in the presence of hepatitis delta antigen (HDAg), and in the presence of transcription factor IIF (
20 sole viral protein, hepatitis delta antigen (HDAg), from the same open reading frame.
21  the viral protein, hepatitis delta antigen (HDAg), in HDV RNA replication are similar for both genot
22 ly encoded protein, hepatitis delta antigen (HDAg), in infected cells; however, the nature of the rib
23  whose product, the hepatitis delta antigen (HDAg), is expressed in two isoforms, small (S-HDAg) and
24 ncodes two forms of hepatitis delta antigen (HDAg), small HDAg (HDAg-S), which is required for viral
25  the latter encodes hepatitis delta antigen (HDAg), the viral protein.
26  the viral protein, hepatitis delta antigen (HDAg), to be synthesized from a single open reading fram
27 s a single protein, hepatitis delta antigen (HDAg), which is required for viral replication.
28  in the presence of hepatitis delta antigen (HDAg), which is the only protein encoded by HDV RNA, the
29 sole viral protein, hepatitis delta antigen (HDAg).
30 d mRNA encoding the hepatitis delta antigen (HDAg).
31 cipal gene product, hepatitis delta antigen (HDAg).
32 sole viral protein, hepatitis delta antigen (HDAg).
33 the sequence of the hepatitis delta antigen (HDAg).
34 s a single protein, hepatitis delta antigen (HDAg).
35           The large hepatitis delta antigen (HDAg-L) mediates hepatitis delta virus (HDV) assembly an
36 ntigen (HDAg-S) and the large delta antigen (HDAg-L), from a single open reading frame.
37 essential proteins, the small delta antigen (HDAg-S) and the large delta antigen (HDAg-L), from a sin
38           The small hepatitis delta antigen (HDAg-S) is expressed throughout replication and is neede
39 bsence of the small hepatitis delta antigen (HDAg-S).
40 revious research has shown that HDV antigen (HDAg) expression can trigger an SjD-like phenotype in vi
41  [HBeAg] negative, anti-hepatitis D antigen [HDAg] positive, and HDV RNA positive, with serum HBsAg c
42 tains two types of hepatitis delta antigens (HDAg) in the virion.
43  the small (S) and large (L) delta antigens (HDAg).
44 icant negative correlation was found between HDAg intensity and focal lymphocytic inflammation and in
45 (198-210), inhibited the interaction between HDAg-L and TAP and blocked HDV virion assembly and secre
46                                         Both HDAgs contain a nuclear localization signal (NLS), but o
47                                     (i) Both HDAgs, particularly LHDAg, enhanced the self-cleavage ac
48 iii) The enhancement of ribozyme activity by HDAg does not require HDV RNA replication.
49 re that allows RNA bending and condensing by HDAg.
50 vities of HDV ribozyme also were enhanced by HDAg.
51 hat nuclear import of HDV RNA is mediated by HDAg.
52 ion of the HDV RNA polyadenylation signal by HDAg.
53 d suppression of the polyadenylation site by HDAg may not significantly regulate the synthesis of the
54 ith HDAg-L, but not with an export-defective HDAg-L mutant, in which Pro(205) was replaced by Ala.
55                        Methylation-defective HDAg lost the ability to form a speckled structure in th
56 which is associated with severe HDV disease, HDAg-L strongly inhibits editing of a nonreplicating gen
57                        Thirty-three distinct HDAg sequences from subtypes I, II, and III were tested
58 a numerous contacts between the RNA and each HDAg monomer.
59 a general association with membranes enables HDAg to inhibit replication.
60 n of HDV RNA synthesis, mostly due to excess HDAg-L production.
61 in vitro using native, bacterially expressed HDAg have been hampered by a lack of specificity for HDV
62 ding experiments using bacterially expressed HDAg showed that the formation of a minimal ribonucleopr
63 he presence or absence of elongation factors HDAg and TFIIF.
64 ltimeric binding is not limited to the first HDAg bound and that a minimum RNA length of between 604
65  that were mutated so as to be defective for HDAg production.
66 Here, the specific RNA features required for HDAg binding and the topology of the complexes formed we
67  the loop end proximal to the start site for HDAg mRNA synthesis.
68                              The large form (HDAg-L) is farnesylated, is expressed only at later time
69 l protein hepatitis delta antigen long form (HDAg-L), which is necessary for viral particle productio
70  leads to the production of the longer form (HDAg-L), which is required for RNA packaging but which i
71                The roles of these two forms, HDAg-S and HDAg-L, are opposed.
72 e pressures on the hepatitis D antigen gene (HDAg).
73                          For both genotypes, HDAg was able to support replication of RNAs of the same
74 uired for viral replication, and large HDAg (HDAg-L), which is essential for viral assembly.
75  hepatitis delta antigen (HDAg), small HDAg (HDAg-S), which is required for viral replication, and la
76                                        Here, HDAg-L proteins from different HDV genotypes and genotyp
77 ow HDAg levels but becomes saturated at high HDAg concentrations.
78 ses linearly with HDAg and dominates at high HDAg levels.
79 e significantly more represented in the high HDAg intensity group compared to the negative and modera
80                                     However, HDAg was found to suppress editing at the amber/W site w
81  self-cleavage activity of HDV RNA; however, HDAgs are not required for HDV RNA cleavage.
82                                         (ii) HDAg could not restore the ribozyme activity of mutant H
83                The inability of genotype III HDAg to support replication of genotype I RNA could have
84 however, neither genotype I nor genotype III HDAg was able to support replication of such mutated RNA
85  of the core arginines of ARM I or ARM II in HDAg-160 did not diminish binding to HDV unbranched rodl
86                                A mutation in HDAg-L and a farnesyl transferase inhibitor were both us
87                  About 11% of codon sites in HDAg were estimated to be under diversifying selection.
88                              While increased HDAg-L production was the primary mechanism of inhibitio
89 uding both the 1.7-kb HDV RNA and the 0.8-kb HDAg mRNA, from the genomic-sense RNA was surprisingly r
90 The hepatitis delta virus (HDV) S-HDAg and L-HDAg antigens are the two isoforms of the single protein
91 ion is initiated from an RNA template, and L-HDAg appears only late in the replication cycle, it rema
92 ence of almost equal amounts of S-HDAg and L-HDAg in the virion raised a puzzling question concerning
93  forms of hepatitis delta antigens (S- and L-HDAg), respectively.
94 The large form of hepatitis delta antigen (L-HDAg), which is responsible for virus packaging, was not
95 mulation of large hepatitis delta antigen (L-HDAg).
96 nsfection of plasmid cDNAs expressing both L-HDAg and HDV RNA results in a potent inhibition of HDV R
97 , it was not due to possible inhibition by L-HDAg, as HDV-S RNA replication was not affected when bot
98 as surprisingly resistant to inhibition by L-HDAg.
99 V RNA replication, whereas the large form (L-HDAg) potently inhibits it by a dominant-negative inhibi
100 s, a small form (S-HDAg) and a large form (L-HDAg).
101 in two isoforms, small (S-HDAg) and large (L-HDAg).
102 ed when a mutant HDV genome unable to make L-HDAg was used, suggesting that L-HDAg did not play a rol
103 w HDV can escape the inhibitory effects of L-HDAg and initiate RNA replication after infection.
104  genome is complexed with equal amounts of L-HDAg and S-HDAg.
105 r examined the effect of overexpression of L-HDAg at various stages of the HDV replication cycle, sho
106 mediates, we showed that a small amount of L-HDAg is sufficient to inhibit HDV genomic RNA synthesis
107 udy, we examined the inhibitory effects of L-HDAg on the synthesis of various HDV RNA species.
108  this study, we investigated the effect of L-HDAg, produced as a result of the natural HDV RNA editin
109 mutant HDV RNA genome unable to synthesize L-HDAg was still exported.
110 ken together, these results indicated that L-HDAg affects neither the rate of HDV RNA synthesis nor t
111 e to make L-HDAg was used, suggesting that L-HDAg did not play a role.
112 nal steady-state level of HDV RNA and that L-HDAg is unlikely to act as an inhibitor of HDV RNA repli
113                              We found that L-HDAg was aggregated in specific nuclear domains and that
114 ttransfection and in the wild type and the L-HDAg-deficient mutant.
115 d that, contrary to conventional thinking, L-HDAg alone, at a certain molar ratio with HDV RNA, can i
116                                      Thus, L-HDAg does not inherently inhibit HDV RNA synthesis.
117 ng that HDV RNA synthesis was resistant to L-HDAg when it was overexpressed 3 days after HDV RNA repl
118                              Further, when L-HDAg expression from HDV-L RNA was abolished by site-dir
119 esis of these RNAs was inhibited only when L-HDAg was in vast excess over S-HDAg.
120 lication cycle, it remains unclear whether L-HDAg can modulate HDV RNA replication in the natural HDV
121  is required for replication of HDV, while L-HDAg inhibits viral replication and is required for the
122                      They also explain why L-HDAg is not produced early in HDV infection, despite the
123 from introduced plasmids, colocalizes with L-HDAg and the transcriptional repressor PML.
124 is required for viral replication, and large HDAg (HDAg-L), which is essential for viral assembly.
125 iated proteins like PML were found in larger HDAg complexes that had developed into apparently hollow
126 s did not abolish the ability of full-length HDAg to inhibit HDV RNA editing in cells, an activity th
127 ciations were detected between MSG-localized HDAg and liver enzymes or an evident HBV coinfection.
128             mRNA synthesis is favored at low HDAg levels but becomes saturated at high HDAg concentra
129  group compared to the negative and moderate HDAg intensity groups.
130                                       Mutant HDAg proteins defective for multimerization exhibited ne
131          In contrast, although myristoylated HDAg-S was incorporated into VLPs far more efficiently t
132 e efficiently than HDAg-S or nonfarnesylated HDAg-L, it was incorporated far less efficiently than wi
133                Neither viral replication nor HDAg was required for the highly specific editing observ
134 tor were both used to abolish the ability of HDAg-L to inhibit replication.
135 hich replication can occur in the absence of HDAg-L.
136  removal of the C-terminal 35 amino acids of HDAg yields a native, bacterially expressed protein, HDA
137      The clear genotype-specific activity of HDAg in supporting HDV RNA replication confirms the orig
138                 (iv) RNA-binding activity of HDAg is required for the enhancement of RNA cleavage.
139               The nuclear export activity of HDAg-L is important for HDV particle formation.
140 equired for the RNA-transporting activity of HDAg.
141  it is not known how the relative amounts of HDAg and HDV RNA affect replication, or whether HDAg syn
142                                  Analyses of HDAg expression, including cell type and subcellular loc
143 study describes the unique colocalization of HDAg with mitochondria.
144 ry RNA sequence, is the major determinant of HDAg RNA binding specificity.
145                                Disruption of HDAg multimerization by site-directed mutagenesis was fo
146                     The C-terminal domain of HDAg-L was shown to directly interact with the N terminu
147 relative amounts via differential effects of HDAg on the production of HDV mRNA and antigenome RNA, b
148 tion of TAP or Aly reduced nuclear export of HDAg-L and assembly of HDV virions.
149 Ag-L was increased, so too was the extent of HDAg-L farnesylation for all three genotypes.
150 sing a novel assay to quantify the extent of HDAg-L farnesylation, we found that genotype 3 HDAg-L wa
151 he HDV genotype III RNA and the two forms of HDAg.
152  RNA may be the first biological function of HDAg in the HDV life cycle.
153 g protein A (DIPA), is a cellular homolog of HDAg.
154 HDAg), but not the small (SHDAg), isoform of HDAg has the capacity to activate the expression of cotr
155     This mutant expressed elevated levels of HDAg-L early during replication, and at later times, its
156                   However, the mechanisms of HDAg-L-mediated nuclear export of HDV ribonucleoprotein
157 uding the phosphorylation and methylation of HDAg.
158 rich motifs (ARMs I and II) in the middle of HDAg.
159 ed a novel posttranslational modification of HDAg and indicated its importance for HDV RNA replicatio
160 hat both the NLS and an RNA-binding motif of HDAg are required for the RNA-transporting activity of H
161 zation signal (NLS) or RNA-binding motifs of HDAg resulted in the failure of nuclear import of HDV RN
162                           In the presence of HDAg and SII, pausing is observed without stimulation of
163 creased in parallel, even in the presence of HDAg.
164 n-amber/W sites and subsequent production of HDAg variants that acted as trans-dominant inhibitors of
165       However, as the intracellular ratio of HDAg-S to HDAg-L was increased, so too was the extent of
166 s indicate that the amino-terminal region of HDAg is in close contact with the RNA and that the propo
167 d conclusive determination of the regions of HDAg involved in RNA binding.
168 sent study specifically examines the role of HDAg multimerization in the formation of the HDV ribonuc
169 nt mutations within the carboxyl terminus of HDAg-L were screened, and three mutants that severely in
170  is limited to a small number of epitopes on HDAg.
171  nuclear localization signal (NLS), but only HDAg-L contains a CRM1-independent nuclear export signal
172  the hepatitis delta virus RNAs and protein, HDAg, perform critical roles in virus replication.
173 lds a native, bacterially expressed protein, HDAg-160, that specifically binds HDV unbranched rod RNA
174 when expressed naturally during replication, HDAg-L is able to inhibit replication and thereby inhibi
175  UGG (tryptophan [W]) codon in the resulting HDAg-L message.
176                                            S-HDAg can transactivate HDV RNA replication.
177                                            S-HDAg is required for replication of HDV, while L-HDAg in
178 complexed with equal amounts of L-HDAg and S-HDAg.
179  at highest magnetic field to characterize S-HDAg.
180    HDAg exists in two forms, a small form (S-HDAg) and a large form (L-HDAg).
181                            The small form (S-HDAg) is required for HDV RNA replication, whereas the l
182            The hepatitis delta virus (HDV) S-HDAg and L-HDAg antigens are the two isoforms of the sin
183                        An R13A mutation in S-HDAg inhibited HDV RNA replication.
184 mbly domain is the sole rigid component in S-HDAg, with its structure remaining fully conserved withi
185   We further found that the methylation of S-HDAg affected its subcellular localization.
186 r, the presence of almost equal amounts of S-HDAg and L-HDAg in the virion raised a puzzling question
187 uch as phosphorylation and acetylation, of S-HDAg can modulate HDV RNA replication.
188 le of the C-terminal RNA-binding domain of S-HDAg in HDV infection.
189                         The methylation of S-HDAg is essential for HDV RNA replication, especially fo
190 ate was not due to insufficient amounts of S-HDAg, as identical results were obtained in a cell line
191 d only when L-HDAg was in vast excess over S-HDAg.
192 d in a cell line that stably overexpresses S-HDAg.
193 DAg), is expressed in two isoforms, small (S-HDAg) and large (L-HDAg).
194                          Here we show that S-HDAg can be methylated by protein arginine methyltransfe
195 rms of hepatitis delta antigen (HDAg), small HDAg (HDAg-S), which is required for viral replication,
196 ion, a majority of human hepatocytes stained HDAg-positive long before HBV spreading was completed, c
197                           These data suggest HDAg may regulate amber/W site editing during virus repl
198                  Furthermore, a peptide, TAT-HDAg-L(198-210), containing the 10-amino acid TAT peptid
199 rporated into VLPs far more efficiently than HDAg-S or nonfarnesylated HDAg-L, it was incorporated fa
200   The results unambiguously demonstrate that HDAg binds HDV RNA as a multimer and that the HDAg multi
201                    Our results indicate that HDAg does not recognize the primary sequence of the RNA;
202 e results confirm the previous proposal that HDAg binds as a large multimer and demonstrate that the
203                   We have further shown that HDAg, via its NLS, interacts with karyopherin alpha2 in
204                   These results suggest that HDAg can regulate the cleavage and ligation of HDV RNA d
205 bout 300 nucleotides (nt) and suggested that HDAg binds the RNA as a multimer of fixed size.
206        Thus, a switch from production of the HDAg mRNA to the full-length HDV RNA does not occur in t
207  significantly regulate the synthesis of the HDAg mRNA, as previously proposed.
208                   While the structure of the HDAg N-terminal assembly domain is known, here we addres
209 vitro, suggesting that nuclear import of the HDAg-HDV RNA complex is mediated by the karyopherin alph
210 DAg binds HDV RNA as a multimer and that the HDAg multimer is formed prior to binding the RNA.
211 esylation of the cysteine residue within the HDAg-L carboxyl terminus is required for both functions.
212  to genotype-specific differences within the HDAg-L carboxyl terminus.
213 t the adenosine to an inosine (I) within the HDAg-S amber codon in antigenomic RNA.
214 ucture of the RNA is preserved when bound to HDAg.
215                       HDAg-L is identical to HDAg-S except that it bears a 19-amino acid extension at
216 contribution of unpaired bases in HDV RNA to HDAg binding is to allow flexibility in the unbranched q
217 ver, as the intracellular ratio of HDAg-S to HDAg-L was increased, so too was the extent of HDAg-L fa
218 rporated far less efficiently than wild-type HDAg-L; thus, farnesylation was required for efficient a
219 binding activity was analyzed in vitro using HDAg-160, a C-terminal truncation that binds with high a
220                                         When HDAg-L is artificially expressed at the onset of replica
221           Finally, it was observed that when HDAg-S was artificially myristoylated, it could efficien
222  required for viral RNA replication, whereas HDAg-L, which is produced as a result of editing, inhibi
223 ver, there is controversy concerning whether HDAg-L expressed naturally at later times as a consequen
224 g and HDV RNA affect replication, or whether HDAg synthesis is regulated by the virus.
225 results are consistent with a model in which HDAg binds HDV unbranched rod RNA as multimers of fixed
226 replicating genotype III reporter RNA, while HDAg-S inhibits only when expressed at much higher level
227 lex TAP-Aly was found to form a complex with HDAg-L, but not with an export-defective HDAg-L mutant,
228 e RNAs form ribonucleoprotein complexes with HDAg.
229 A cellular gene whose product interacts with HDAg has now been identified, and this interaction was f
230 ome RNA accumulation increases linearly with HDAg and dominates at high HDAg levels.
231 ys, a combinatorial effect not observed with HDAg and SII.
232  normally are closely linked separate within HDAg-associated complexes.

 
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