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1 HRD also activates the cyclic GMP-AMP synthase (cGAS)-st
2 HRD classifiers were applied to the dataset and included
3 HRD genomic tumor classifiers suggested that 7% to 10% o
4 HRD in these models and patient samples was evaluated by
5 HRD is always expressed in D2, but in B6, it is expresse
6 HRD patients with germline or somatic alterations in any
7 HRD prevalence ranged between 14.5%-16.5% through target
8 HRD responses to previously-encoded ("old") negative ima
9 HRD scores and mutational signatures associated with HRD
10 HRD status was not prognostic in resected PDAC; however
11 HRD was associated with higher ex vivo PARPi sensitivity
12 eived anthracycline and no radiotherapy or a HRD <0.1Gy, by 60.4 (95% CI, 22.4-163.0) in those who ha
13 ver, a small subset of alterations affecting HRD, DDR and MMR genes may not be detected optimally.
15 ose who had received no anthracycline and an HRD>/=30Gy, and 61.5 (95% CI, 19.6-192.8) in those who h
18 thracycline and either no radiotherapy or an HRD<0.1Gy, the risk was multiplied by 18.4 (95% CI, 7.1-
25 tive correlation between PLK1 expression and HRD score, indicating that increased PLK1 expression sup
26 e residues, such as DFG-Asp, alphaC-Glu, and HRD-Asp, change protonation states dependent on the DFG,
29 on-deficient HRD-Dup (BRCA1 mutant-like) and HRD-Del (BRCA2 mutant-like) tumours harboured inflammato
31 e rare autosomal recessive syndrome known as HRD, a devastating disorder characterized by congenital
32 c breast cancer cohort, samples predicted as HRD had higher complete CR (AUC, 0.76 [95% CI, 0.54 to 0
34 P status partially correlated with DNA-based HRD test outcomes (70% concordance for both RECAP-CHORD
35 RECAP-HRD; 37%), was subjected to DNA-based HRD tests (i.e., Classifier of HOmologous Recombination
40 as associated with increased three-biomarker HRD score (22.2 for HBV RNA+ vs. 16.0 for HBV RNA-).
46 rmline mutations in the better characterized HRD genes (BRCA1, BRCA2, PALB2, ATM, ATR, CHEK2, RAD51,
47 ) in the ITT population, BRCA-mutant cohort, HRD cohort, and BRCA wild-type/LOH low patient subgroup,
48 umors with the same PV displayed contrasting HRD status, and age at diagnosis did not correlate with
50 eutral images while heart rate deceleration (HRD) and skin conductance responses (SCRs) were monitore
55 inducing agents through their HR deficiency (HRD), BRCA1-associated tumors display heterogeneous resp
57 rs with homologous recombination deficiency (HRD) (hazard ratio, 0.38; 95% CI, 0.24 to 0.59) and 9.3
58 redicts homologous recombination deficiency (HRD) and clinical outcomes directly from digital histopa
60 rboring homologous recombination deficiency (HRD) are sensitive to PARP inhibitors and platinum chemo
61 rs with homologous recombination deficiency (HRD) can benefit from platinum salts and poly(ADP-ribose
63 (MSI), homologous recombination deficiency (HRD) enriched with genomic deletions and BRCA2 aberratio
64 target homologous recombination deficiency (HRD) in breast cancer limits their overall effectiveness
66 ivalent homologous recombination deficiency (HRD) induced by these genetic and epigenetic BRCA pertur
72 ith the Homologous Recombination Deficiency (HRD) score, we found a positive correlation between PLK1
73 (PGA); homologous recombination deficiency (HRD) scores] and two novel [Shannon diversity index (SI)
76 (UPD), homologous recombination deficiency (HRD), epithelial-mesenchymal transition and inflammation
77 r shows homologous recombination deficiency (HRD), resulting in a BRCA-like phenotype that might rend
78 rs with homologous recombination deficiency (HRD), such as cancer patients with germline or somatic B
79 rboring homologous recombination deficiency (HRD), their clinical benefit remains limited, highlighti
80 Seven homologous recombination deficiency (HRD), two DNA damage response (DDR) and four mismatch re
81 al with homologous recombination deficiency (HRD), which we attribute to chromosome instability cause
82 -tBRCAm homologous recombination deficiency (HRD)-positive and non-tBRCAm intention-to-treat (ITT) po
83 ts with homologous recombination deficiency (HRD)-positive tumours (including patients with BRCA and
90 rs were homologous recombination deficiency (HRD; BRCA mutation and loss of heterozygosity status) cl
91 homologous recombination repair deficiency (HRD) while the other is dominated by whole genome duplic
92 homologous recombination repair deficiency (HRD), mismatch repair deficiency, and tumour mutational
93 revealed that homologous repair deficiency (HRD)-related SBS3 increases at each time point in patien
96 powerful strategy to eliminate HR-deficient (HRD) cancers, this is limited by an incomplete understan
97 onths]); homologous recombination deficient (HRD) cohort (236 rucaparib v 118 placebo; 7.93 months [9
99 valuated homologous recombination deficient (HRD) phenotypes in epithelial ovarian cancer (EOC) consi
100 s of the homologous recombination-deficient (HRD) status on the clinicopathologic features, chemother
102 d homologous recombination repair deficient (HRD) tumors are likely also PARP-inhibitor sensitive.
104 ly annotated by Takaya et al. (HR-deficient, HRD; HR-proficient, HRP), and (2) 226 clinical HGSOC cas
105 embrane-bound HMG-CoA reductase degradation (HRD) ubiquitin-ligase complex is a key player of the ER-
106 were analyzed: height of retinal detachment (HRD) at the fovea, central macular thickness (CMT), disr
108 0.87 and demonstrated the ability to detect HRD at tumor fractions as low as 1%, making it 10 times
111 Standard diagnostic tests for detecting HRD require molecular profiling, which is not universall
112 lack the sensitivity required for detecting HRD scars in low tumor purity samples, especially in liq
115 hic pathogens that cause hairy root disease (HRD) on hydroponically grown Solanaceae and Cucurbitacea
116 HRD, and half of those that did not display HRD were explained by retention of the wild-type allele,
121 , the EAT-Lancet Healthy Reference Diet (EAT-HRD) and its Mexican adaptation, the Milpa diet, and 3 p
122 n and proposed a healthy reference diet (EAT-HRD) that can be adapted to the culture, geography, and
123 Mexican adults consume higher than the EAT-HRD for grains (mostly refined), dairy, added sugars, an
124 and processed meats); and lower than the EAT-HRD for vegetables, fruits, legumes, nuts, tubers and st
126 11 in S. cerevisiae is independent of either HRD or UBC gene function, but it is largely dependent on
127 ing a BRCA1/2 mutation, but with an elevated HRD-LOH score, who achieved a favorable pathologic respo
131 less than 70% of tumors displayed functional HRD, and half of those that did not display HRD were exp
132 RD by genomic instability scores, functional HRD by RAD51, and gene-specific loss of heterozygosity w
136 accuracy than HRR gene mutations and genomic HRD analysis for predicting PARPi response (95%, 67%, an
137 er, the prevalence of functional and genomic HRD was 55.2% (16 of 29) and 61.1% (11 of 18) for RAD51C
140 spite the low quality of evidence, a greater HRD, disruption of the EZ and/or ELM, presence of ICCs,
143 nce of RAD51 foci in tumor cells, and a high HRD score suggest a deleterious effect of this mutation
144 apeutic option for BRCA2-mutated and/or high HRD score patients with GEA, including patients with fam
145 e only approach that consistently identified HRD in whole-exome-sequenced breast and ovarian cancers,
148 bone geometry of the catalytically important HRD motif deviates from ideality in high-resolution stru
151 inomas were defined mainly by differences in HRD-related and APOBEC-related mutational signatures and
152 ygosis, and yet is significantly enriched in HRD patients (frequency = 2.1%, i.e., a 3.5-fold enrichm
158 ciated with higher benefit from veliparib in HRD cancer, as were decreasing KELIM values in HRP cance
160 omising strategy to pharmacologically induce HRD and enhance the efficacy of PARPi therapies in TNBC.
162 ed the Hmg-CoA reductase degradation ligase (HRD-ligase), and degraded by cytosolic 26S proteasomes.
164 iency-large-scale state transitions [HRD-LOH/HRD-LST] scores were 12.68 and 5.11, respectively), wher
166 observed diets, optimal diets showed a mean HRD score increase of 13.91 (95% confidence interval: 13
167 was 35.9 mo, shorter than HRP-RBL (52.0 mo), HRD-RBL (57.1 mo), and HRD-RBH subgroups (53.3 mo; all p
170 bility score (GIS) used by Myriad's MyChoice HRD assay; (2) substitution base signature 3 (SBS3); (3)
173 Hmg2p degradation occurs by the action of HRD genes that direct Hmg2p to the ubiquitin-proteasome
176 pathogenic variants and genomic features of HRD, suggesting that PACC should be considered as part o
182 iated with genomic "scarring," indicative of HRD history, but exhibited no clear correlations with cl
183 s but exhibiting genomic scars indicative of HRD led to the FDA approval of the first scar-based HRD
189 in Ashkenazi Jewish (AJ); and prevalence of HRD based on other definitions (ie, alterations in other
193 higher frequencies of features suggestive of HRD (27% versus 21%) and a higher proportion of PIK3CA m
195 an be targeted to improve PARPi treatment of HRD cancers and may provide a means to overcome PARPi re
197 clusively utilizes a highly specific type of HRD scar-small deletions with microhomology-and its asso
204 n nonplatinum treatment outcome by predicted HRD status in three breast cancer cohorts, including CR
206 ade serous ovarian cancer, DeepHRD-predicted HRD samples had better OS after first-line (HR, 0.46; P
207 ould serve as a valuable tool for predicting HRD and clinical response in breast and ovarian cancers.
209 ) selected based on the RECAP test (26 RECAP-HRD; 37%), was subjected to DNA-based HRD tests (i.e., C
210 appears that the physiologically regulated, HRD-dependent degradation of HMGR is effected by a progr
211 Here, we demonstrate a functionally relevant HRD evident at genomic and transcriptomic levels pointin
212 in 656 (26.8%), including features reporting HRD (298 [12.2%] total cases and 76 [6.3%] ER-positive,
213 follow-up was ~59 months for both rucaparib (HRD, n = 185; ITT, n = 427) and placebo (HRD, n = 49; IT
215 lyses for HR-positive tumors signatures, S3 (HRD, P < 0.001) and S13 (APOBEC, P = 0.001) as well as e
216 RECAP) test is a functional method to select HRD tumors based on their inability to form RAD51 foci.
217 tly examined the association of the separate HRD complex components with various ERAD substrates.
219 DeepHRD was compared with four standard HRD molecular tests using breast (n = 349) and ovarian (
220 ency and nature of tBRCAm, HRD score status [HRD-positive (score 42) versus HRD-negative (score <42)
221 n the F-helix hydrogen bonds to the strained HRD backbone in diverse eukaryotic and eukaryotic-like p
222 S 37.3 versus 23.0 months] in the non-tBRCAm HRD-positive and 0.63 (95% CI 0.52-0.76, P < 0.0001; mPF
225 amples from 161/302 patients yielded tBRCAm, HRD and gsLOH data for 143 (47%), 129 (43%) and 125 (41%
228 ents with recurrent disease, suggesting that HRD continues to be an active mutagenic process after di
241 east HMG-CoA reductase (Hmg2p) occurs by the HRD endoplasmic reticulum quality control pathway, imply
244 tested this model by directly comparing the HRD dependency of the ER-associated degradation for vari
245 nregulated substrates of ER degradation, the HRD genes are the agents of HMG-R degradation but not th
246 erevisiae that functions separately from the HRD/DER pathway comprised of Hrd1p, Hrd3p, Der1p, and Ub
248 w-up duration was 14 months; patients in the HRD group had lower tumor progression rates at 6 months,
249 dual-specificity depends on residues in the HRD+2 and APE-4 positions that are uncommon in either se
250 ation of HIP substrates does not involve the HRD/DER pathway ubiquitin ligase Hrd1p, but instead uses
251 erized quality control ubiquitin ligase, the HRD complex, which is responsible for the endoplasmic re
253 through the plasma separation chamber of the HRD (where heparin was bound to PLL), and reinfused into
254 support the model of a dimeric state of the HRD complex and provide first-time evidence of self-asso
261 rane protein Der1, which is a subunit of the HRD-ligase, is involved in the export of aberrant polype
263 Compared with HR-competent patients, the HRD group was predominantly serous with a higher median
264 CPY* overexpression likely saturates the HRD/DER pathway and activates the HIP pathway, so the sl
266 as led to the reasonable hypothesis that the HRD (Hmg CoA reductase degradation) gene-encoded protein
267 nzyme A reductase (HMGR), indicated that the HRD complex discerns between a degradation-competent "mi
278 a1185stop tumors responded markedly worse to HRD-targeted therapy than did Brca15382stop tumors.
280 on deficiency-large-scale state transitions [HRD-LOH/HRD-LST] scores were 12.68 and 5.11, respectivel
283 .28; 95% CI, 0.13 to 0.61) or BRCA wild-type HRD cancer (hazard ratio, 0.43; 95% CI, 0.26 to 0.70), c
284 ing domain in UBN1, located between the UBN1 HRD and middle domain, which binds DNA through electrost
285 veal that conserved residues within the UBN1-HRD and H3.3 G90 as key determinants of UBN1-H3.3-bindin
290 score status [HRD-positive (score 42) versus HRD-negative (score <42) using the Myriad myChoice(R) CD
292 ts completed an image recognition task where HRD, SCRs and affective ratings were recorded again.
297 entify a greater proportion of patients with HRD than analyses limited to gene-level approaches.
298 lymerase inhibitors to include patients with HRD-positive ovarian cancer beyond those with BRCA mutat
299 ovarian cancer, especially in patients with HRD-positive platinum-sensitive disease, which includes
300 - or PALB2-mutant breast cancer treated with HRD-targeted therapy who developed progressive disease-1