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1 LEDGF associates with mixed-lineage leukemia (MLL) fusio
2 LEDGF binding to IN dimers had a k(on) of 0.0285 nm(-1).
3 LEDGF dominant interference and depletion impair HIV-1 i
4 LEDGF is thus the first example of a cellular protein co
5 LEDGF modestly stimulated (two- to threefold) concerted
6 LEDGF mRNA and protein levels and mRNA levels of known s
7 LEDGF normally directs integrations to the bodies of exp
8 LEDGF potently stimulated strand transfer activity of di
9 LEDGF PWWP exhibits nanomolar binding affinity to purifi
10 LEDGF strongly stabilized these interactions and promote
11 LEDGF tethers IN to the host chromatin and enables targe
12 LEDGF/p75 and HRP2 are predicted to share a similar doma
13 LEDGF/p75 and HRP2 IBDs avidly bound HIV-1 IN in an in v
14 LEDGF/p75 dependence is universally conserved in the ret
15 LEDGF/p75 depletion by contrast preferentially altered p
16 LEDGF/p75 directly interacts with lentiviral integrase p
17 LEDGF/p75 interactions with lentiviral integrases are we
18 LEDGF/p75 is also able to act as a molecular tether link
19 LEDGF/p75 is known to enhance the integrase strand trans
20 LEDGF/p75 was not displaced from IN during aggregation,
21 LEDGF/p75, a chromatin reader recognizing H3K36me3 marks
22 LEDGF/p75, a key cellular binding partner of the lentivi
23 LEDGF/p75, which promotes viral integration into active
24 Functional characterizations demonstrate a LEDGF/p75-independent role of SSRP1 in the regulation of
26 stigate in vivo chromatin binding of JPO2, a LEDGF/p75- and c-Myc-interacting protein involved in tra
27 electively impaired upon overexpression of a LEDGF/p75-binding cyclic peptide CP65, originally develo
28 epletion of the transcriptional co-activator LEDGF/p75 by RNA interference alters the genome-wide pat
30 ce spectroscopy, we identified an additional LEDGF/p75-MLL interface, which overlaps with the binding
34 for the development of therapeutics against LEDGF/p75-dependent MLL fusion-driven leukemic disorders
37 nds impairs both integrase-LEDGF binding and LEDGF-independent integrase catalytic activities with si
39 the importance of the order of viral DNA and LEDGF/p75 addition to IN for productive concerted integr
41 ctor implicated in viral nuclear import) and LEDGF/p75 in the targeting of the viral preintegration c
43 iffusive JPO2 can oligomerize; that JPO2 and LEDGF/p75 interact directly and specifically in vivo thr
44 veral studies have shown that both MENIN and LEDGF/p75 are required for efficient MLL-fusion-mediated
46 racting protein 1 (PSIP1)/p75, also known as LEDGF, whose PWWP domain binds to H3K36me3, interacts wi
47 sistent with a role for chromatin-associated LEDGF/p75 in stimulating integrase activity during infec
53 ntiviral PIC nuclear import is unaffected by LEDGF/p75 knockdown, this protein is a component of func
57 d instead by the transcriptional coactivator LEDGF/p75, which was required for nuclear localization.
58 with viral DNA and its key cellular cofactor LEDGF to effectively integrate the reverse transcript in
60 it IN interaction with its cellular cofactor LEDGF/p75 with comparable potencies in vitro, their prim
62 c cells expressing MLL interaction-defective LEDGF/p75 mutants revealed that this interaction is esse
63 rfering RNA expression eliminated detectable LEDGF/p75 expression and caused dramatic, stable redistr
64 f intact IN tetramers bound to two different LEDGF truncations allow for placement of the integrase b
66 tion complexes (PICs) showed that endogenous LEDGF/p75 is a component of functional HIV-1 and FIV PIC
67 es, we used TALENs to definitively eradicate LEDGF/p75 by deleting either all of PSIP1 or the exons t
69 otein Lens Epithelium-Derived Growth Factor (LEDGF) and human immunodeficiency virus (HIV) integrase
70 h the lens epithelium-derived growth factor (LEDGF) binding pocket on IN and were identified through
71 r p75/lens epithelium-derived growth factor (LEDGF) binds human immunodeficiency virus type 1 (HIV-1)
72 actor lens epithelium-derived growth factor (LEDGF) by menin indicates that menin is a molecular adap
74 The lens epithelium-derived growth factor (LEDGF) is a cellular factor that binds IN and tethers pr
79 to as lens epithelium-derived growth factor (LEDGF), is the dominant cellular binding partner of HIV-
80 vator lens epithelium-derived growth factor (LEDGF)/p75 (p75) is an essential HIV integration cofacto
81 PSIP1/lens epithelium-derived growth factor (LEDGF)/p75 are available, many questions remain regardin
85 N) to lens epithelium-derived growth factor (LEDGF)/p75 in large part determines the efficiency and s
87 actor lens epithelium-derived growth factor (LEDGF)/p75 that helps to guide integration into host gen
88 otein lens epithelium-derived growth factor (LEDGF)/p75 underlies the targeting of gene bodies, where
91 otein lens epithelium-derived growth factor (LEDGF)/transcriptional coactivator p75 are an emerging c
93 lular lens epithelium-derived growth factor (LEDGF/p75) binds both chromosomal DNA and HIV integrase,
96 The lens epithelium-derived growth factor (LEDGF/p75), an IN interacting cellular cofactor, has bee
98 uided by integrase-interacting host factors (LEDGF/p75 for HIV-1 and BET proteins for MoMLV) that tet
99 iviral INs possessed detectable affinity for LEDGF in either pull-down or yeast two-hybrid assays.
101 alyzed HIV integration in cells depleted for LEDGF/p75, and found that integration was (i) less frequ
104 N by ALLINIs together with the inability for LEDGF/p75 to effectively engage the virus during its egr
105 results establish a molecular mechanism for LEDGF/p75-mediated tethering of HIV-1 integrase to chrom
106 ents in these cells also excluded a role for LEDGF/p75 in HIV-1 assembly and showed that the main ALL
109 These findings provide new insight into how LEDGF modulates HIV-1 IN structure and function, and hig
113 that HIV-1 IN is exclusively cytoplasmic in LEDGF/p75-deficient cells, but mainly nuclear in LEDGF/p
115 F/p75-deficient cells, but mainly nuclear in LEDGF/p75 wild type cells, and that cytoplasmic HIV-1 IN
117 ignificantly enriched, relative to random in LEDGF/p75 deficient cells, other host factors likely con
119 is that evolutionarily conserved regions in LEDGF/p75 exposed to solvent and harboring posttranslati
120 , HIV-1 and FIV infection and replication in LEDGF/p75-deficient cells was equivalent to that in cont
123 otein-protein contacts in the full-length IN-LEDGF complex that lay outside of the observable IBD-CCD
129 ing between ALLINI and IN that mimics the IN-LEDGF/p75 interaction but instead altered the positionin
130 romolar IC50 values for inhibition of the IN-LEDGF/p75 interaction, but significant cytotoxicity was
131 ssociated functions, IN catalysis and the IN-LEDGF/p75 interaction, determines the multimode mechanis
133 and extend existing biochemical data for IN.LEDGF complexes and lend new insights into the quaternar
136 al mechanism of LEDGINs is that they inhibit LEDGF binding to IN, which prevents targeted integration
137 The most active derivative (5) inhibited LEDGF/p75-dependent HIV-1 IN activity in vitro with an I
138 ed SUMO acceptor sites drastically inhibited LEDGF SUMOylation, extended the half-life of LEDGF/p75,
139 is class of compounds impairs both integrase-LEDGF binding and LEDGF-independent integrase catalytic
140 eported to selectively inhibit the integrase-LEDGF interaction in vitro and impair HIV-1 replication
141 transcribed euchromatin, where the integrase-LEDGF/p75 interaction drives integration into gene bodie
143 into active genes, reducing integration into LEDGF/p75-regulated genes, and increasing integration in
145 c feed-forward regulatory circuits involving LEDGF/p75 and AKT that promote metastatic phenotypes in
147 oci in medulloblastoma and point to the JPO2:LEDGF/p75 protein complex as a potentially new targetabl
148 hich overlaps with the binding site of known LEDGF/p75 interactors-HIV-1 integrase, PogZ, and JPO2.
150 (RNA-seq) analysis of HEK293T cells lacking LEDGF/p75 or the LEDGF/p75 integrase-binding domain (IBD
151 PWWP or the AT-hook domain from full-length LEDGF/p75 reduced Triton-resistant chromatin binding, wh
152 Biochemical analysis showed that full-length LEDGF/p75 resists Triton X-100 extraction from chromatin
156 ysis of the strand transfer step when 150 nM LEDGF/p75 was present during the 3'-processing step.
157 ses indicate that, in the presence of 150 nM LEDGF/p75, active integrase/donor DNA complexes were inc
158 Ala was sufficient to impair the ability of LEDGF/p75 to mediate HIV-1 DNA integration, although the
160 integrase/donor DNA formed in the absence of LEDGF/p75 became refractory to the stimulatory effect of
164 267 to 281 reduced the cofactor activity of LEDGF/p75 to levels observed for chromatin-binding-defec
168 strate for the first time the association of LEDGF proteins with the FACT complex and give further su
169 established that the simultaneous binding of LEDGF/p75 to chromatin and to HIV-1 integrase is require
172 utic target because, like CCR5, depletion of LEDGF/p75 is tolerated well by human CD4+ T cells, and k
176 domain of JPO2 and the C-terminal domain of LEDGF/p75, comprising the integrase-binding domain; and
177 ted to a 96-well plate format, the effect of LEDGF/p75 on both the 3'-processing and strand transfer
180 etic compartment and examined the effects of LEDGF/p75 depletion in postnatal hematopoiesis and the i
184 complex with the IN binding domain (IBD) of LEDGF has furthermore revealed essential protein-protein
187 ding to LEDGF/p75, whereas pre-incubation of LEDGF/p75 and IN followed by addition of viral DNA yield
188 Detailed analysis of the interaction of LEDGF/p75 with the FACT complex indicates that LEDGF/p75
189 reveal two distinct functional interfaces of LEDGF PWWP: a well-defined hydrophobic cavity, which sel
191 LEDGF SUMOylation, extended the half-life of LEDGF/p75, and significantly increased its transcription
192 did not affect the cellular localization of LEDGF proteins and was not necessary for their chromatin
194 However, the exact molecular mechanism of LEDGF/p75 in HIV-1 integration is not yet completely und
195 approaches, we determined the mechanisms of LEDGF/p75 DNA-binding in vitro and chromatin-association
200 reaction remained active in the presence of LEDGF/p75, but displayed 3- to 7-fold higher IC50 values
201 gration was inhibited if the molar ratios of LEDGF to IN were >1, apparently due to the disruption of
203 egration is clearly established, the role of LEDGF/p75-associated proteins in HIV-1 infection remains
204 n (GFP) with multiple C-terminal segments of LEDGF inhibited HIV-1 replication substantially, but min
213 nificantly reduce the dependency of HIV-1 on LEDGF/p75 during infection and that this difference corr
214 in in determining the dependency of HIV-1 on LEDGF/p75 during infection highlights a connection betwe
215 nisms of retroviral integration, focusing on LEDGF/p75--the first cellular protein shown to have a ro
218 wth factor/transcriptional co-activator p75 (LEDGF) and human immunodeficiency virus type 1 (HIV-1) i
219 wth factor/transcriptional co-activator p75 (LEDGF/p75) protein was recently identified as a binding
220 e lens epithelium-derived growth factor p75 (LEDGF/p75) is a chromatin-bound protein essential for ef
221 Lens epithelium-derived growth factor p75 (LEDGF/p75) is a DNA-binding, transcriptional co-activato
222 c lens-epithelium-derived-growth-factor-p75 (LEDGF/p75)-binding site on HIV-1 integrase, an attractiv
223 N-lens epithelium-derived growth factor/p75 (LEDGF/p75) interface , we developed a set of modified 8-
225 264 promoted aggregation of IN and preformed LEDGF/p75-IN complexes, suggesting a mechanism of inhibi
226 racting with the chromatin-anchoring protein LEDGF at a distinct surface formed by both menin and MLL
227 protein JPO2 and its partner binding protein LEDGF/p75 as critical modulators of PI3K/AKT signaling a
230 x expression and may also explain why PSIP1 (LEDGF) is found as a fusion partner with NUP98 in myeloi
234 nscription units into cells made stringently LEDGF/p75-deficient by RNAi resulted in much lower stead
235 rference (RNAi) has been useful for studying LEDGF/p75, but the potent cofactor activity of small pro
237 the gene activation potential of C-terminal LEDGF (aa 199-530); thus the N-terminal domain (aa 5-62)
240 sclosed the DNA-binding domain of N-terminal LEDGF mapped between amino acid residues 5 and 62, a 58
242 Collectively, our results demonstrate that LEDGF contains three DNA-binding domains, which regulate
243 ein interaction assays, we demonstrated that LEDGF/p75 complexes with a chromatin-remodeling complex
244 ever, compelling evidence was not found that LEDGF protection was associated with upregulation of hea
245 DGF/p75 with the FACT complex indicates that LEDGF/p75 interacts with SSRP1 in an hSpt16-independent
249 5 integrase-binding domain (IBD) showed that LEDGF/p75 contributes to splicing patterns in half of th
251 in vitro and in vivo experiments showed that LEDGF/p75 is dispensable for steady-state hematopoiesis
258 to perturbations of the structure around the LEDGF-binding site, we propose that small molecule inhib
259 cy of an allosteric inhibitor that binds the LEDGF/p75 binding site on IN, a result that was not sign
262 re constructed to constitutively express the LEDGF-binding VH and these cells showed interference wit
265 peptide spanning residues 178 to 197 of the LEDGF that encompasses its AT-hook DNA-binding elements.
268 structural similarities, 24 residues of the LEDGF/p75 PWWP domain were mutagenized to garner essenti
269 Our results suggest that the dynamics of the LEDGF/p75-chromatin interaction depend on the specific p
271 is of HEK293T cells lacking LEDGF/p75 or the LEDGF/p75 integrase-binding domain (IBD) showed that LED
273 which the ING2 PHD finger was linked to the LEDGF IBD directed integrations near the start sites of
274 the HP1alpha chromodomain was linked to the LEDGF IBD directed integrations to sites that differed f
275 hibitors of HIV-1 integrase that bind to the LEDGF/p75 interaction site and disrupt the structure of
276 stand the molecular mechanism underlying the LEDGF integrase-binding domain (IBD) interaction with ML
281 ned unchanged upon its subsequent binding to LEDGF/p75, whereas pre-incubation of LEDGF/p75 and IN fo
286 egrase binding domain (IBD) is not unique to LEDGF/p75, as a second human protein, hepatoma-derived g
287 exon with a single TALEN pair yielded trace LEDGF/p75 levels that were virologically active, affirmi
290 -derived growth factor p75 splicing variant (LEDGF), which is a reader protein of H3K36me3, and the K
294 sical properties of intasomes assembled with LEDGF peptide fusion IN have enabled us to determine the
296 HIV-1 mutant viruses unable to interact with LEDGF indicate that IN function is highly sensitive to p
298 se results confirm that the interaction with LEDGF is conserved within and limited to Lentivirus and
299 Protection requires only interaction with LEDGF/p75, and it is independent of the subcellular loca
300 inding are decelerated upon interaction with LEDGF/p75, very strong locking of their complex onto chr