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1 MSI analysis of tissue sections exposed to phospholipid
2 MSI of individual cells (of a known cell type) affords a
3 MSI(+) patients were associated with earlier year of dia
4 MSI-H is a good prognostic factor in nonmetastatic colon
5 MSI-H should be a predictive factor because it is associ
6 MSI-H tumors associated with diminished intra-tumoral he
7 MSI-H/MMR-D is predictive of LS across a much broader tu
8 MSI-H/MMR-D tumors, for which pembrolizumab is a standar
9 MSI-high status was assigned based on analysis of 114 in
10 MSI/IHC and PREMM(5) effectively identify patients with
11 MSI/IHC and PREMM(5) had comparable sensitivity for iden
13 ated with tumor differentiation (p = 0.045), MSI status (p = 0.021) and BRAF mutation (p = 0.001).
14 plete marker data were classified as type 1 (MSI-high, CIMP-positive, with pathogenic mutations in BR
16 d with laser-induced postionization (MALDI-2-MSI) to simultaneously visualize the distribution of sev
17 were observed than that indicated by the 2D-MSI data, suggesting that quantitative analysis of molec
20 c neighbor embedding to nonlinearly align 3D MSI to MRI data, identify and reconstruct biologically r
22 l single-plaque analysis in reconstructed 3D-MSI objects revealed the Abeta(1-42Arc) peptide to be lo
24 genic mutations in BRAF or KRAS), or type 5 (MSI-high, no CIMP, no pathogenic mutations in BRAF or KR
26 ution analysis of single region-data from 64 MSI GOAs show that chromosome 8 gains are early genetic
27 ) and equal 97.5% (468/484) specificity; 64% MSI-H and 73% MMR deficient tumours unexplained by LS or
28 dence for either, making this LPS-to-Lipid A-MSI (LLA-MSI) method, compatible with simultaneous host-
30 t arrays (NAPA), are emerging as alternative MSI techniques that can provide complementary insight in
31 atients (96.6% v 96.6%; P = 1.000), although MSI/IHC had significantly superior specificity for LS (8
35 mor programmed death-ligand 1 expression and MSI-H/MMR-D status were not associated with objective re
39 itate broader use of liquid-extraction-based MSI in biological research, drug discovery, and clinical
41 NCDB) to investigate the association between MSI and pathologic complete response (pCR) in this patie
42 driven by the aberrant interactions between MSI and tau in the nuclei associated with age-dependent
44 15%, n = 55) when measuring urinary HP-G by MSI-CE-MS/MS as compared to total hydrolyzed urinary HP
46 evaluation of amyloid plaque-like objects by MSI: a fast PLAQUE PICKER tool that enables a statistica
48 e innate diversity within molecular classes, MSI platforms capable of detecting a wide array of speci
50 nging process due to dimensional complexity, MSI data sparsity, lack of direct spatial-correspondence
52 stability and/or mismatch repair-deficiency (MSI/IHC) and clinical prediction models effectively scre
53 llite-high and/or mismatch repair deficient (MSI-H/MMR-D) status, and somatic and germline genomic co
56 performance to the capillary-based nano-DESI MSI in terms of stability and sensitivity; a spatial res
57 vide a detailed description of the nano-DESI MSI platform, fabrication of the nano-DESI and shear for
59 in desorption electrospray ionization (DESI) MSI, which enables cell-type-specific and in situ metabo
60 Desorption electrospray ionization (DESI)-MSI defined regions of a hypoxic core and a proliferativ
62 y ionization-mass spectrometry imaging (DESI-MSI) facilitates the convergence of analytical chemistry
63 desorption electrospray ionization-MSI (DESI-MSI) and bespoke chemometrics to assess the phospholipid
64 he relatively low spatial resolution of DESI-MSI and provides a new platform for in situ metabolic in
67 for accelerated diagnosis studies using DESI-MSI in the upper gastrointestinal endoscopy suite, as we
71 number of mass spectra associated with each MSI sample can represent a challenge for designing model
72 tomated fashion, employing rigid and elastic MSI image registration using structured and plaque-unrel
76 des and findings from molecular analyses for MSI and dMMR from 8836 colorectal tumors (of all stages)
77 ical samples is particularly challenging for MSI approaches, as options to appropriately address mole
78 geneity in GBM biology and opportunities for MSI investigations.See related article by Randall et al.
80 y advanced rectal cancer who were tested for MSI and treated definitively with chemoradiation followe
84 t success of immunotherapy in high-frequency MSI (MSI-H) and/or MMR-D tumors now supports testing for
86 eduction of the visual P100 latency, greater MSI-related slowing of the auditory P200 and an overall
87 0.3% (37 of 14,020) of patients with MSI-H, MSI-indeterminate, and microsatellite-stable tumors, res
91 ycolysis in microsatellite instability-high (MSI-H) tumors, suggesting glycolysis as a potential targ
95 ablation inductively coupled plasma (LA-ICP)-MSI analysis localized endogenous elements including mag
98 led plasma mass spectrometry imaging (LA-ICP-MSI) can be used together to obtain nanomaterial distrib
99 dynamic range combined in a 21T MALDI FT-ICR MSI experiment enable researchers to visualize molecular
102 , Raman spectroscopy, multispectral imaging (MSI), and macro X-ray fluorescence (MA-XRF) with minimal
103 s quantified with mass spectrometry imaging (MSI) can support objective diagnosis in minutes using a
114 e present a novel mass spectrometry imaging (MSI) method for assaying the spatial distribution of enz
115 ily revealed with mass spectrometry imaging (MSI) methods, and the resulting lipid distributions serv
116 additive value of mass spectrometry imaging (MSI) of atherosclerosis-affine Gadofluorine P for molecu
118 onization (MALDI) mass spectrometry imaging (MSI) provides a unique in situ chemical profile that can
119 onization (MALDI) mass spectrometry imaging (MSI) requires instrumentation that is capable of high ma
122 e (FT-ICR), MALDI mass spectrometry imaging (MSI) to image the distribution of endogenous metabolites
123 his work, we used mass spectrometry imaging (MSI) to map metabolites and lipids in patient-derived xe
124 In quantitative mass spectrometry imaging (MSI), the gold standard adds a single structural homolog
125 rption/ionization mass spectrometry imaging (MSI), we were for the first time able to demonstrate, in
126 ue in the case of mass spectrometry imaging (MSI), where the use of different ionization sources allo
129 duces widespread DNA double-strand breaks in MSI cells, leading to cell cycle arrest and/or apoptosis
130 toward accurate subtissue classification in MSI, enabling rapid distinction between tissue types and
132 derived from shared frameshift mutations in MSI-H cancer and Lynch syndrome patients, suitable for t
134 -dinucleotide repeats are highly unstable in MSI cells and undergo large-scale expansions, distinct f
135 ervised classification, which takes as input MSI spectra, and assigns class labels to subtissue locat
137 tionship between microsatellite instability (MSI) and response to neoadjuvant chemoradiation in recta
138 at the degree of microsatellite instability (MSI) and resultant mutational load, in part, underlies t
139 Tumors with microsatellite instability (MSI) are caused by a defective DNA mismatch repair syste
140 in patients with microsatellite instability (MSI) cancers, but no such correlations were found for th
141 r cell-intrinsic microsatellite instability (MSI) signature, which was efficiently exported to gastri
143 ancer cells with microsatellite instability (MSI), a form of genetic hypermutability that arises from
145 factors such as microsatellite instability (MSI), cancer subsite within the colon versus rectum, and
146 d information on microsatellite instability (MSI), CpG island methylator phenotype (CIMP), and mutati
147 lar subtypes for microsatellite instability (MSI), CpG island methylator phenotype (CIMP), and somati
148 ogical features: microsatellite instability (MSI), CpG island methylator phenotype (CIMP), B-Raf prot
149 nts, focusing on microsatellite instability (MSI), genetic mutations, CpG island methylator phenotype
150 types, including microsatellite instability (MSI), homologous recombination deficiency (HRD) enriched
151 al burden (TMB), microsatellite instability (MSI), programmed cell death protein 1 (PD-1), and its li
152 in patients with microsatellite instability (MSI)-high tumors (n = 11) and 36.2% (26.5% to 46.7%) in
153 An analysis of microsatellite instable (MSI) cell lines reveals the dysregulation of specific pr
156 changing numbers of metal-support interface (MSI) sites as water coverage changes with temperature.
157 he identification of a cancer cell-intrinsic MSI signature, recognizing a subset of MSS patients with
158 , we used desorption electrospray ionization-MSI (DESI-MSI) and bespoke chemometrics to assess the ph
159 erational parameters, both LAAPPI- and LAESI-MSI with a spatial resolution of 70 mum produced high-qu
162 ionization mass spectrometry imaging (UV-LDI-MSI) using monoisotopic silver-109 nanoparticle-enhanced
163 ysiological level, the ASD group showed less MSI-related reduction of the visual P100 latency, greate
164 either, making this LPS-to-Lipid A-MSI (LLA-MSI) method, compatible with simultaneous host-pathogen
166 antigen epitope preservation to allow MALDI MSI to be performed and directly followed by IHC analysi
168 highest mass spectral performance for MALDI MSI experiments, and often reveals molecular features th
169 ontaining metabolites with CHC-Mal for MALDI MSI was also possible when using aged tissue in the pres
172 /ionization mass spectrometry imaging (MALDI MSI) and laser scanning confocal microscopy (LSCM).
173 /ionization mass spectrometry imaging (MALDI MSI) is a powerful technique for spatially resolved meta
174 /ionization mass spectrometry imaging (MALDI MSI) is an established tool for the investigation of for
175 ionization mass spectrometry imaging (MALDI MSI) technologies offers a high promise to deeper unders
176 /ionization mass spectrometry imaging (MALDI MSI)-based study was designed in order to selectively ma
181 lipid coverages between the NAPA- and MALDI-MSI platforms presents the possibility of selective lipi
184 -tissue derivatization was applied for MALDI-MSI of N-glycans from human laryngeal cancer and ovarian
185 omplish by using the heme signals from MALDI-MSI and iron signals from LA-ICP-MSI to overlay the imag
187 /ionization mass spectrometry imaging (MALDI-MSI) and laser ablation inductively coupled plasma mass
188 /ionization mass spectrometry imaging (MALDI-MSI) has been widely applied to the discovery of potenti
189 /ionization mass spectrometry imaging (MALDI-MSI) is an established tool in drug development, which e
190 ionization mass spectrometry imaging (MALDI-MSI) is widely used to visualize and analyze the distrib
191 /ionization mass spectrometry imaging (MALDI-MSI) was developed for analysis of N-glycans from FFPE t
194 abilities of BzPy as a multifunctional MALDI-MSI matrix are demonstrated by imaging endogenous and PB
199 y, five micron high-spatial resolution MALDI-MSI revealed that Arabidopsides are localized to the chl
201 y spectra are acquired during a single MALDI-MSI experiment or data from independent experiments are
204 gs, indicating that coupling PBCs with MALDI-MSI has the potential to develop rapid, large-scale, and
206 -tissue labeling strategy coupled with MALDI-MSI shows great potential to spatially characterize N-gl
207 nts in both instrumentation and methodology, MSI of tissue samples at single-cell resolution remains
214 cability of the novel ambient LARESI SRM/MRM MSI method to both investigating and discovering cancer
215 cess of immunotherapy in high-frequency MSI (MSI-H) and/or MMR-D tumors now supports testing for MSI
219 erage of mouse brain lipids afforded by NAPA-MSI is compared to that of MALDI-MSI using two common MA
222 ) score >= 2.5%, including those with normal MSI/IHC, should be offered multigene panel testing.
223 mutations in BRAF but not KRAS), type 2 (not MSI-high, CIMP-positive, with pathogenic mutations in BR
224 mutations in BRAF but not KRAS), type 3 (not MSI-high or CIMP, with pathogenic mutations in KRAS but
225 mutations in KRAS but not BRAF), type 4 (not MSI-high or CIMP, no pathogenic mutations in BRAF or KRA
226 tic insight for pathological accumulation of MSI/tau aggregates providing a potential basis for thera
227 algorithm and a workflow for the analyses of MSI experiments, that detects components of single-ion i
230 at our workflow facilitates incorporation of MSI in neuroscience-related topics, including the study
231 s, we argue that electro-cortical indices of MSI deficits in ASD: (a) can be detected in early-adoles
234 a prerequisite for combining the results of MSI and other single-cell modalities (e.g. mass cytometr
235 ly and more strongly associated with risk of MSI CRC (OR per 5 kg/m2: 1.69; 95% CI: 1.34, 2.12; Phete
238 ellite stable (MSS) patients, of a subset of MSI-like tumors with common molecular aspects and signif
240 ivation selectively impairs the viability of MSI-H but not microsatellite stable (MSS) colorectal and
241 can be used for exploratory visualization of MSI datasets without prior deep chemical or histological
242 cts colorectal cancer specimens with dMMR or MSI using H&E-stained slides; it detected tissues with d
243 g detector identified specimens with dMMR or MSI with a mean AUROC curve of 0.92 (lower bound, 0.91;
249 ient or microsatellite instability-low (pMMR-MSI-L) tumors have low mutation burden and constitute ~8
252 However, the mechanism by which WRN protects MSI-associated cancers from double-strand breaks remains
253 atrix-assisted laser desorption/ionization-Q-MSI (MALDI-Q-MSI), using a mixture of three isotopically
255 d laser desorption/ionization-Q-MSI (MALDI-Q-MSI), using a mixture of three isotopically labeled vers
256 ased culturing workflow that enables a rapid MSI-compatible steam inactivation of pathogens and gener
258 sent study set out to investigate non-social MSI stimuli and their electrophysiological correlates in
259 capillary electrophoresis-mass spectrometry (MSI-CE-MS) and CE with indirect UV detection are used, r
261 er risk for cases with microsatellite stable/MSI-low, CIMP-negative, BRAF-wildtype, and KRAS-wildtype
265 testing was more discriminatory for LS than MSI with targeted methylation testing, with 100% versus
266 For the first time, we demonstrate that MSI-NACE-MS offers a rapid yet robust platform for direc
268 dy was to improve sample preparation so that MSI could provide comprehensive and reproducible neurope
269 isualization of hyperspectral images and the MSI data specifically, such as principal component analy
270 heterolytic H(2) activation directly at the MSI (E(app) ~ 25 kJ/mol) and significantly slower hetero
274 ohorts, PREMM(5) had superior sensitivity to MSI/IHC at identifying patients with any high-penetrance
275 seems to be the first application of UMAP to MSI data, we assess the value of applying alternative di
278 iously treated patients, regardless of tumor MSI status, the median DOR was 21.2 months (95% CI, 7.6
280 Also, total hydrolyzed plasma FAs using MSI-NACE-MS was compared to mean concentrations reported
281 assification of whole tissue specimens using MSI data, which naturally preserves the spatial informat
283 c repositories in many research fields where MSI is commonly applied; yet, there is no standardized p
287 ive associations were stronger compared with MSI-high, CIMP-positive, BRAF-mutated, or KRAS-mutated t
290 mor biopsies of 20 independent patients with MSI colorectal cancer revealed that a median number of 3
291 e, recognizing a subset of MSS patients with MSI transcriptional traits, endowed with better prognosi
292 m indel mutations shared among patients with MSI-H endometrial, colorectal, and stomach cancers.
293 9), and 0.3% (37 of 14,020) of patients with MSI-H, MSI-indeterminate, and microsatellite-stable tumo
295 rter time of DSS compared with patients with MSI-high tumors (HR(DSS) 0.42; 95% CI 0.27-0.64), regard
297 We confirm the association of rs1800734 with MSI+ but not MSS cancer risk in our own data and by meta
298 p-learning detector to identify samples with MSI from these slides; performance was assessed by cross