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1 imerize with pre-B-cell leukemia homeobox-1 (Pbx1).
2 pre-B-cell leukemia transcription factor-1 (PBX1).
3 ssion that includes the transcription factor Pbx1.
4 binding to the common heterodimeric partner Pbx1.
5 s1, decreasing its stability by sequestering Pbx1.
6 g KIX and bone marrow immortalization by E2A-PBX1.
7 be activated cooperatively by Klf4 and Meis2/Pbx1.
8 eins but not by the leukemic oncoprotein E2a-Pbx1.
9 t completely abrogate binding of E2A and E2A-PBX1.
10 evelopment more severely than single loss of Pbx1.
11 Wnt16 has been shown to be targeted by E2A-Pbx1.
12 g but independent of direct interaction with PBX1.
13 harbored within the PBX1 homeodomain of E2A-PBX1.
14 e homeodomain proteins, which includes human Pbx1.
15 n factors, including Tbx3, Gata5, Prdm1, and Pbx1.
16 conditional transformation properties on E2A-PBX1.
17 d deletions and loss of function variants in PBX1.
19 ations/deletions in the PBX homeobox 1 gene (PBX1), a gene known to have a crucial role in kidney dev
22 reviously unappreciated pathway in which E2A-PBX1 acts in concert with RUNX1 to enforce transcriptome
23 osteocalcin and Bsp promoters revealed that Pbx1 acts through a Pbx-binding site that is required to
24 Hoxd3(-/-) compound mutants, suggesting that Pbx1 acts together with multiple Hox proteins in the dev
25 hat decreasing Pbx2 dosage in the absence of Pbx1 affects axial development more severely than single
26 (SLC19A1, an MTX uptake transporter) in E2A-PBX1 ALL, significantly higher expression of breast canc
29 Functional studies validated Sprouty2 and PBX1, among others, as FoxO-regulated mediators of endot
30 iral transcription whereas overexpression of PBX1 and a PBX1-associated protein, PREP1, enhanced vira
32 posterior HOX protein, HoxA9, complexed with Pbx1 and DNA, which reveals that the posterior Hox hexap
34 bx1;Emx2 genetic interaction by showing that Pbx1 and Emx2 can bind specific DNA sequences as heterod
39 Thus, our results reveal novel roles for PBX1 and its transcriptional network in mDAn development
40 ites can be cooperatively activated by Meis2/Pbx1 and Klf4, dependent primarily on recruitment by Klf
41 rogenitors exhibit elevated levels of HoxA9, Pbx1 and Meis1, exaggerated HoxA9-Pbx1-Meis1 activity, a
45 for B-cell maturation and oncogenesis by E2A-PBX1 and occurs through conserved PhiXXPhiPhi motifs (wi
52 ole of two developmentally critical factors (Pbx1 and Prep-1) in the regulation of homeostasis in the
53 demonstrating that the homeodomain proteins PBX1 and PREP1 are cellular factors involved in Moloney
55 conserved binding sites for Klf4, Meis2, and Pbx1 and show that at least some of these genes can be a
57 repressor of pre-B-cell leukemia homeobox 1 (PBX1) and is also known to regulate estrogen receptor fu
58 pre B-cell leukemia transcription factor 1 (PBX1) and PBX-regulating protein-1 (PREP1), function as
59 late cortical patterning (CoupTFI, Pax6, and Pbx1), and analysis of enhancer activity in Pax6 mutants
60 tion factors (Hox(s), Gata3, Meis1, Eya1 and Pbx1), and enforced their active gene transcription in m
61 pre-B-cell leukemia transcription factor 1 (Pbx1), and identified a range of previously undetected d
64 nscription factors Run1t1, Hlf, Lmo2, Prdm5, Pbx1, and Zfp37 imparts multilineage transplantation pot
66 ncluded the genetic abnormality t(1;19)(TCF3-PBX1), any CNS involvement at diagnosis, and T-cell immu
67 f Pax6 and further demonstrate that Msx2 and Pbx1 are bona fide direct regulators of early Six3.2 dis
71 ription whereas overexpression of PBX1 and a PBX1-associated protein, PREP1, enhanced viral transcrip
72 c lesions in childhood ALL: ETV6-RUNX1, TCF3-PBX1, BCR-ABL1, and MLL translocations and trisomies of
74 ssues or isolated cells, we further detected PBX1 binding to known regulatory regions of the neuron-s
75 romatin immunoprecipitation assays show that Pbx1 binds to the Hox11 promoter in spleen mesenchymal c
81 revious analysis of the in vivo functions of Pbx1 by targeted mutagenesis in mice has revealed roles
82 s, we identified a de novo missense variant, PBX1:c.551G>C p.R184P, in a patient with tetralogy of Fa
84 nclude that deleterious sequence variants in PBX1 cause intellectual disability and pleiotropic malfo
85 hIP-BIT to find target genes from NOTCH3 and PBX1 ChIP-seq data acquired from MCF-7 breast cancer cel
86 ides the first unbiased profiling of the E2A-PBX1 cistrome in pre-B ALL cells and reveals a previousl
88 ose-dependent pattern regulation in Gli3 and Pbx1 compound mutations, we show that the global and reg
95 64, CD304, CD97, CD102, CD99, CD300a, CD130, PBX1, CTNNA1, ITGB7, CD69, CD49f) were differentially ex
96 prenatal smoking and birth weight (on MDS2, PBX1, CYP1A2, VPRBP, WBP1L, CD28, and CDK6 genes), and p
98 rate that Sle1a1 MSCs express high levels of Pbx1-d as compared with congenic C57BL/6J (B6) MSCs.
100 tested the hypothesis that the expression of Pbx1-d favors MSC differentiation and impairs their immu
105 xpression of the lupus susceptibility allele Pbx1-d isoform impairs MSC functions, which may contribu
110 , reducing expression of endogenous Meis2 or Pbx1 decreases p15 gene expression and increases the num
114 ransfer experiments, B-cell development from Pbx1-deficient fetal liver cells was also severely compr
115 ously reported, Pbx1 homozygous mutant mice (Pbx1-/-) develop malformations and hypoplasia or aplasia
118 pt these interactions, destabilize the HOXB1:PBX1:DNA complex, and alter HOXB1 transcriptional activi
119 ns-ETV6-RUNX1 (TEL-AML1), BCR-ABL1, and TCF3-PBX1 (E2A-PBX1)-frequently found in precursor-B-cell acu
122 Here, we provide a biochemical basis for Pbx1;Emx2 genetic interaction by showing that Pbx1 and E
125 E2A-PBX1 in cell and animal models, the E2A-PBX1-enforced cistrome, the E2A-PBX1 interactome, and re
126 ence further maturation, suggesting that E2a/Pbx1 establishes an early block in pro-T-cell developmen
133 ic activity of Six1-bound novel enhancers of Pbx1, Fgf8, Dusp6, Vangl2, the hair-cell master regulato
134 NX1 (TEL-AML1), BCR-ABL1, and TCF3-PBX1 (E2A-PBX1)-frequently found in precursor-B-cell acute lymphob
136 ered mice that conditionally express the E2A-PBX1 fusion oncogene, which results from chromosomal tra
139 e t(1;19) chromosomal translocation with E2A-PBX1 fusion, and were less likely to have hyperdiploid b
140 t mediator, cg22638236, was annotated to the PBX1 gene body involved in skeletal patterning and progr
141 at B-lineage ALL with either TEL-AML1 or E2A-PBX1 gene fusion, or T-lineage ALL, accumulates signific
145 g functions in shoulder development and that Pbx1 genetically interacts with Emx2 in this process.
146 ol spleen development via separate pathways, Pbx1 genetically regulates key players in both pathways,
147 eduction or absence of Pbx2 or Pbx3 leads to Pbx1 haploinsufficiency and specific malformations that
148 l lines, and no transforming function of E2a/Pbx1 has been reported in cultured lymphoid progenitors.
150 luded missense substitutions adjacent to the PBX1 homeodomain (p.Arg184Pro, p.Met224Lys, and p.Arg227
154 r cells, are absent in the splenic anlage of Pbx1 homozygous mutant (-/-) embryos, implicating the TA
157 ic mice mutant for the transcription factors Pbx1, Hox11 (Tlx1), Nkx3.2 (Bapx1) and Pod1 (capsulin, T
161 es have shown the oncogenic functions of E2A-PBX1 in cell and animal models, the E2A-PBX1-enforced ci
162 tudies have demonstrated a critical role for Pbx1 in cellular proliferation and patterning and sugges
164 division, as inactivation of conditional E2a/Pbx1 in either factor-dependent pro-T cells or pro-T cel
165 Our results establish an essential role for Pbx1 in genetic interactions with its family members and
166 en together, these data establish a role for Pbx1 in mesenchymal-epithelial signaling and demonstrate
169 ribe remodeling of signaling networks by E2A-PBX1 in pre-B-ALL, which results in hyperactivation of t
171 al ablation of the TALE transcription factor Pbx1 in renal VMC progenitors in the mouse led to the pr
173 , we identify the direct target sites of E2A-PBX1 in t(1,19)-positive pre-B ALL cells and show that,
175 e investigated the potential requirement for Pbx1 in the development of the pharyngeal arches and pou
178 we identify HoxA10 amino acids 224-249 as a Pbx1-independent repression domain, which interacts with
180 cus itself is also directly activated by E2A-PBX1, indicating a multilayered interplay between E2A-PB
183 emia homeobox interacting protein 1 or human PBX1 interacting protein (PBXIP1/HPIP) is a co-repressor
184 els, the E2A-PBX1-enforced cistrome, the E2A-PBX1 interactome, and related mechanisms underlying leuk
185 at normally stabilize and regulate import of PBX1 into the nucleus, but the mechanisms underlying its
186 n together, the above findings indicate that Pbx1 is a direct Notch3-regulated gene that mediates the
190 al-epithelial signaling and demonstrate that Pbx1 is an essential regulator of mesenchymal function d
192 y inactive genes: In undifferentiated cells, PBX1 is bound to the H1-compacted promoter/proximal enha
193 y Pbx1 short hairpin RNA knockdown show that Pbx1 is essential for cell proliferation and tumorigenic
196 (CD19(+)) cells and thereafter revealed that Pbx1 is not necessary for B-cell development to proceed
200 nduction of tubulogenic mesenchyme; however, Pbx1(-/-) kidneys contained fewer nephrons and were char
201 the lymphoid versus myeloid character of E2a/Pbx1 leukemia and may cooperate with E2a/Pbx1 to dictate
202 example, whereas the E2A portion of the E2A-Pbx1 leukemia fusion protein mediates robust transcripti
203 ation of mouse and human ALLs, including E2A-PBX1 leukemias, and increased disease-free survival afte
204 oliferation of human and mouse preBCR(+)/E2A-PBX1(+) leukemias in vitro and in vivo Furthermore, comb
208 lish a significant RUNX1 requirement for E2A-PBX1-mediated target gene activation and leukemogenesis.
209 of HoxA9, Pbx1 and Meis1, exaggerated HoxA9-Pbx1-Meis1 activity, and progenitor transformation in co
210 differentiation; the suppression of a HoxA9-Pbx1-Meis1 progenitor program and the induction of a gra
212 program of SVZ neurogenesis, suggesting that PBX1 might act as a priming factor to mark these genes f
213 to be limited to few ALL subtypes (e.g. TCF3-PBX1), most mature B-cell lymphomas rely on BCR signalin
214 leiotropic malformations resembling those in Pbx1 mutant mice, arguing for strong conservation of gen
216 that decreased Pdgfrb dosage in conditional Pbx1 mutants substantially rescues vascular patterning d
218 complementation assays, we demonstrate that Pbx1 null embryonic stem (ES) cells fail to generate com
222 the great-artery anomalies of compound Msx2/Pbx1-null embryos remain within the same spectrum as tho
225 Furthermore, the adverse effects of E2a-Pbx1 on pre-B cell survival and differentiation are part
226 nique dependence on self-association for E2A-PBX1 oncogenic activity suggests potential approaches fo
229 [T-ALL] and B cell ALL [B-ALL] with the TCF3-PBX1 or ETV6-RUNX1 fusions), and 2 subtypes had higher M
231 own chromosomal translocations (t(1;19)(TCF3-PBX1) or MLL), and 6 of which lacked any previously know
232 te that the homeodomain transcription factor Pbx1 orchestrates separate transcriptional pathways to c
233 ation, demonstrating that disruption of this Pbx1-Pax3-Msx2 regulatory pathway partially underlies th
234 re that E2A-PBX1 self-associates through the PBX1 PBC-B domain of the chimeric protein to form higher
236 Pbx2-deficient (Pbx2(-/-)) embryos, compound Pbx1(-/-); Pbx2(+/-) mutants, in addition to their exace
238 ulator of superstructure patterning, whereas Pbx1, Pbx2, Hoxa11 and Hoxd11 act as proximal and distal
241 posterior limb and regulating ZPA function, Pbx1/Pbx2 exert a primary hierarchical function on Hox g
246 ing and hindlimb positioning are governed by Pbx1/Pbx2 through their genetic control of Polycomb and
247 ts show how the oncogenic fusion protein E2A-PBX1 perturbs signaling pathways upstream of PLCgamma2 a
251 ATA4 (GATA-binding protein 4) homeobox genes PBX1 (pre-B-cell leukemia transcription factor 1) and ME
252 and show that, compared with normal E2A, E2A-PBX1 preferentially binds to a subset of gene loci cobou
253 g with the stabilization and accumulation of PBX1, PREP1 induces the expression of multiple activator
257 h3/CSL protein complex directly binds to the Pbx1 promoter segment harboring the CSL-binding sequence
265 nduced, MEIS associates with chromatin-bound PBX1, recruits PARP1/ARTD1, and initiates PARP1-mediated
266 Collectively, our results establish that PBX1 regulates adult neural cell fate determination in a
269 Four further associations at or close to the PBX1, RORalpha, NTN1, and SYT6 loci also came close to g
273 progenitor cells carrying floxed alleles of Pbx1 significantly reduced the production of neurons and
276 protein interactions that otherwise modulate PBX1 stability, nuclear localization, DNA binding, and t
277 y was performed to elucidate the role of the Pbx1 TALE protein in the corneal epithelium of mice.
279 nal transcriptional activation domain of E2A-PBX1, termed the PCET motif, which has previously been i
280 tion site 1 (Meis1) forms a heterodimer with Pbx1 that augments Hox-dependent gene expression and is
281 dominant-negative splice isoform of the gene Pbx1 that corresponds to the NZM2410 lupus susceptibilit
282 nslocation resulting in a fusion protein E2A-Pbx1 that promotes transformation and leukemogenesis.
283 further document a direct interaction of E2A-PBX1, through a region spanning the PBX1 homeodomain, wi
284 D1 with HEB-AD1 abolished the ability of E2A-Pbx1 to activate target genes and to induce cell transfo
285 E2a/Pbx1 leukemia and may cooperate with E2a/Pbx1 to dictate the pre-B-cell phenotype of human leukem
287 onditional Pax5 deletion cooperated with E2A-PBX1 to expand progenitor B cell subpopulations, increas
288 ompensate for the inability of monomeric E2A-PBX1 to stably bind DNA and circumvents protein interact
290 on and protein levels revealed that although Pbx1 transcripts are higher in homozygotes, amounts of P
291 All cell lines and primary blasts with E2A-PBX1 translocation and a portion of patients with other
292 ted the first functional model of a missense PBX1 variant and provided strong evidence that p.R184P i
295 We observed that the homeodomain factor Pbx1, which cooperates with MyoD to stimulate myogenin e
297 leukemias expressing the fusion protein E2A-PBX1, which is present in 5%-7% of pediatric and 50% of
300 monstrate using conditional mutagenesis that Pbx1, with and without Pbx2(+/-) sensitization, regulate