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1 PDE activity is required for robust replication in myelo
2 PDE is caused by mutations in ALDH7A1, also known as ant
3 PDE is characterized by recurrent seizures that are resi
4 PDE levels of PDGF-AA, platelet glycoprotein VI, integri
5 PDEs controlling natriuretic-peptide-coupled cGMP remain
12 showed that 2',5'-phosphodiesterases (2',5'-PDEs) encoded by the prototypical Betacoronavirus, mouse
13 -CoV, encode 2',5'-phosphodiesterases (2',5'-PDEs) that antagonize the OAS-RNase L pathway, and we re
14 The consistent structural alignment of 57 PDE ligand binding site residues enables the systematic
16 phosphodiesterase 3A (PDE3A) gene encodes a PDE that regulates cardiac myocyte cyclic adenosine mono
17 ls by deletion of the pdeA gene coding for a PDE promoted biofilm formation in Streptococcus mutans.
20 es to show that the isolated EAL domain of a PDE from Escherichia coli (YahA) is in a fast thermodyna
21 ase A (PKA) R-subunit through formation of a PDE-PKAR-cyclic adenosine monophosphate (cAMP) complex (
22 specifically inhibited DisA but not YybT (a PDE) whilst TA was more promiscuous and inhibited both D
23 9,10-tetrahydrobenzo[a]pyrene (dG-N (2) -B[a]PDE) were not detected in any specimen, whereas N-(deoxy
24 8,9,10-tetrahydrobenzo[a]pyrene (dG-N(2)-B[a]PDE); the aromatic amine 4-aminobiphenyl (4-ABP), N-(deo
34 larly on those proteins bearing both DGC and PDE modules, and for future optimization studies to targ
37 osphodiesterase-5 (PDE5) gene expression and PDE activity is significantly reduced in penile tissues
38 drug molecules, including COX, ACE, MAO, and PDE inhibitors, have been successfully [(18)F]-labeled i
41 sfer (QRET) for cGMP to monitor both sGC and PDE activities using high throughput screening adoptable
45 y map cAMP gradients at the nanoscale around PDE molecules and the areas of resulting downstream acti
46 e monophosphate have been attempted, such as PDE-3 or PDE-5 inhibition (with negative or neutral resu
47 exogenously provided cholesterol augmented, PDE inhibitor-induced steroidogenesis, suggesting that t
52 ith a large fraction of cAMP being buffered, PDEs can create nanometer-size domains of low cAMP conce
53 ssociation from sGC, and cGMP degradation by PDE, exerted a dominant influence on cGMP accumulation r
58 study, we identify PDE10A as the major cAMP PDE in mouse striatum and monitor PKA-dependent PDE10A p
60 G15) had a ~15-fold increase in cardiac cAMP-PDE activity and a ~30% decrease in cAMP content and fra
61 lting in a ~50-fold increase in cardiac cAMP-PDE activity caused a ~50% decrease in fractional shorte
62 s/mouse) had a ~50% increase in cardiac cAMP-PDE activity, which did not modify basal cardiac functio
64 substructure analysis of the cocrystallized PDE ligands in combination with those in the ChEMBL data
65 Fifteen patients with molecularly confirmed PDE were detected using liquid chromatography-mass spect
67 its, this mechanism is able to use a cyclase/PDE enzyme pair to dynamically control a cyclic nucleoti
69 show that calcium- and calmodulin-dependent PDEs (PDE1A and PDE1C) and PDE3A modulate the developmen
70 and inhibited the activity of EAL-dependent PDEs (PA2133, PvrR, and purified recombinant RocR) from
71 pG exert product inhibition on EAL-dependent PDEs, thereby increasing intracellular c-di-GMP in Delta
75 ogy for understanding the roles of different PDEs in the regulation of cyclic nucleotide signaling.
76 ynergistic relationships among the different PDEs that coordinate cAMP-signaling cascades in these ce
78 In Jurkat cells we find multiple, distinct PDE-regulated phosphoproteomes that can be defined by th
79 osphoproteome analyses of myocytes with each PDE selectively inhibited reveals substantial differenti
82 150 bp periodic downstream sequence element (PDE) following the typical pause location, strongly sugg
85 previously published pseudopodium-enriched (PDE) protein/phosphoprotein datasets to identify novel P
89 ion-diffusion partial differential equation (PDE) models have been only occasionally used since they
94 solution of partial differential equations (PDEs) is challenging because of the need to resolve spat
95 ric MHV system (MHV(Mut)) in which exogenous PDEs were expressed from an MHV backbone lacking the gen
96 osomes (EDEs) and platelet-derived exosomes (PDEs) were precipitated and enriched separately by immun
98 e enzyme PDE10A is the most highly expressed PDE in striatal medium-sized spiny neurons (MSNs) with l
99 rea under the curve [AUC] = 0.926), even for PDE patients (AUC = 0.901, sensitivity = 0.857, specific
102 d biochemical characterization of a c-di-GMP PDE, PdcA, 1 of 37 confirmed or putative c-di-GMP metabo
105 d on an analysis of the phosphodiesterase I (PDE I)-mediated size variation of a fluorescein-labeled
107 gative modulator of TLRs that we detected in PDE, inhibited PDE-induced, TLR2- or TLR4-mediated profi
108 ught to determine age-related differences in PDE activity and associated intracellular signaling resp
110 l cells in the brain, and its dysfunction in PDE is associated with neuronal migration abnormalities
111 usly quantify multiple lysine metabolites in PDE, including alpha-aminoadipic semialdehyde (a-AASA),
113 bsence (with GTPgammaS) of Tr* inactivation, PDE activation required more light (and was therefore le
114 ant of MHV (ns2(H126R)) encoding an inactive PDE fails to antagonize RNase L activation and replicate
117 r of TLRs that we detected in PDE, inhibited PDE-induced, TLR2- or TLR4-mediated profibrotic response
120 ent phosphodiesterase PDE-1 and co-localizes PDE-1 with molecular sensors for CO(2) at dendritic ends
121 data suggest that whereas PDE4 is the major PDE isoform involved in the regulation of global intrace
126 mising drug target with the emergence of new PDE inhibitors and a novel PKA target protein, HSP20, wh
127 o imaging data were also fit well by the new PDE model, with estimates of the dissociation constant (
128 ce of well-established and potentially novel PDE-dependent mechanisms that regulate cGMP under physio
129 cellular levels of cAMP by cyclic nucleotide PDE inhibition both suppresses the immune response and i
131 Processing of BdlA leads to activation of PDE DipA, which results in a net reduction of c-di-GMP a
133 residues enables the systematic analysis of PDE-ligand interaction fingerprints (IFPs), the identifi
134 E8-RIalpha complex represents a new class of PDE-based complexes for specific drug discovery targetin
137 ed to an ongoing surge in the development of PDE inhibitors as lead compounds for trypanocidal drugs.
144 We demonstrate that acute inhibition of PDE-4 by pharmacologic treatment in hippocampal slices r
145 pharmacological and genetic manipulation of PDE activity, we found that the rise in cAMP resulting f
146 brain tissue was utilized for measurement of PDE-associated metabolites and Western blot analysis.
148 vel, it is not clear whether perturbation of PDE alone, under oxidative stress, is the best approach
149 gest that a disturbance in the regulation of PDE-coupled CNs linked to N-type Ca(2+) channels is an e
150 erstanding of the structural requirements of PDE binding that will be useful in future drug discovery
151 p54(nrb)/NONO in regulating the stability of PDE transcripts by facilitating the interaction between
155 is the first instance, to our knowledge, of PDEs directly interacting with a cAMP-receptor protein i
157 en the I-site of DGCs and the active site of PDEs; this molecule represents a novel tool for mechanis
158 tely integrable hydrodynamic-type systems of PDEs - which provides explicit finite-size solutions, ma
159 icellular systems require solving systems of PDEs for release, uptake, decay and diffusion of multipl
164 sphate have been attempted, such as PDE-3 or PDE-5 inhibition (with negative or neutral results), NO-
165 te that using cGMP-specific antibody, sGC or PDE activity and the effect of small molecules modulatin
166 0.39 nM, ~100-fold selectivity versus other PDE enzymes, clean cytochrome P450 profile, in vivo targ
167 0.49, and >5000-fold selectivity over other PDEs, fully attenuates MK-801-induced hyperlocomotor act
172 a long-term OvC patient-derived explant (OvC-PDE) culture strategy in which architecture and cell typ
174 d ADORA2B signaling underlies reduced penile PDE activity by decreasing PDE5 gene expression in a HIF
175 binds the Ca(2+)-dependent phosphodiesterase PDE-1 and co-localizes PDE-1 with molecular sensors for
178 s is presented of the 220 phosphodiesterase (PDE) catalytic domain crystal structures present in the
179 s RVs relies on its 2'-5'-phosphodiesterase (PDE) domain to counteract RNase L-mediated antiviral sig
180 rotein 2 (ns2) is a 2',5'-phosphodiesterase (PDE) that cleaves 2-5A, thereby antagonizing RNase L act
181 and that treatment with a phosphodiesterase (PDE) 4 inhibitor rolipram rescues the decrease in cAMP.
182 portion of p70 includes a phosphodiesterase (PDE) domain and an oligonucleotide/oligosaccharide bindi
188 /DHHA1) domain-containing phosphodiesterase (PDE) GdpP, S. aureus produces a second cytoplasmic DHH/D
189 ors of the cGMP-degrading phosphodiesterase (PDE) 5 have achieved blockbuster status in the treatment
191 re, we show that the dual phosphodiesterase (PDE)7- glycogen synthase kinase (GSK)3 inhibitor, VP3.15
194 the nitric oxide (NO)-GMP-phosphodiesterase (PDE) pathway, the evaluation of nitrates, synthetic natr
195 our effort in identifying phosphodiesterase (PDE) 4B-preferring inhibitors for the treatment of centr
197 he expression of multiple phosphodiesterase (PDE) isoforms, including PDE2A, PDE3A, PDE3B, PDE4A, PDE
198 l 3',5'-cyclic nucleotide phosphodiesterase (PDE) inhibitors, concentrating on both experimental and
199 t combining inhibitors of phosphodiesterase (PDE) 3 and PDE4 provides greater benefits compared with
201 On average around one phosphodiesterase (PDE) molecule is spontaneously active per mouse compartm
203 RET approach and in vitro phosphodiesterase (PDE) activity assays, we show that atropine acts as an a
205 n of cAMP degradation by phosphodiesterases (PDE) likely has an important role, because cAMP is inact
206 cellular cAMP gradients, phosphodiesterases (PDE) mediate fundamental aspects of brain function relev
213 nylyl cyclases (ACs) and phosphodiesterases (PDEs) since their discoveries 40 years ago, downstream c
215 levels are regulated by phosphodiesterases (PDEs), with PDE4s predominantly responsible for cAMP deg
218 yclic nucleotide coupled phosphodiesterases (PDEs) play a key role limiting the hydrolysis of cAMP an
219 tors, adenylyl cyclases, phosphodiesterases (PDEs)), and receptor tyrosine kinases involved in growth
220 GMP (c-di-GMP)-degrading phosphodiesterases (PDEs) and the chemosensory protein BdlA, with BdlA playi
221 cificity, cAMP-degrading phosphodiesterases (PDEs) have been suggested to confine cAMP to distinct ce
223 e cAMP-degrading enzymes phosphodiesterases (PDEs) play a key role in shaping local changes in cAMP.
224 cAMP-degrading enzymes, phosphodiesterases (PDEs), localise to specific subcellular domains within w
226 le, c-di-GMP hydrolysing phosphodiesterases (PDEs) have been identified as key targets to aid develop
228 ferent cyclic nucleotide phosphodiesterases (PDEs) have not yet been identified in most cell types.
229 sis by cyclic nucleotide phosphodiesterases (PDEs) is a critical determinant of the amplitude, durati
232 ety of cyclic nucleotide phosphodiesterases (PDEs), which play a critical role in the regulation of c
235 ylate cyclases (DGCs) or phosphodiesterases (PDEs) were screened for their involvement in low-tempera
242 iPSC-CMs, we found that phosphodiesterases (PDEs) 2A and PDE3A were upregulated in DCM iPSC-CMs and
243 been recently shown that phosphodiesterases (PDEs) can catalyze dissociation of bound cAMP and thereb
248 we identified that Orn serves as the primary PDE-B enzyme that removes pGpG, which is necessary to co
249 y activity, as well as SureChEMBL for recent PDE related patents, to provide a wider context for expl
250 of PDE1, the only family of Ca(2+)-regulated PDEs, also induced a mitogenic response to AVP in NHK ce
251 th BdlA playing a pivotal role in regulating PDE activity and enabling dispersion in response to a wi
252 of the intramolecular mechanisms regulating PDE function and trafficking is emerging, making these p
254 ole of cAMP hydrolysis and the most relevant PDEs in the pathogenesis of PKD, we examined cyst develo
259 )/NONO led to increased expression of select PDE isoforms revealed that p54(nrb)/NONO regulates the s
261 ew insights into how conserved and selective PDE interaction hot spots can accommodate the large dive
262 tabases ChEMBL and PDB for fragments showing PDE inhibitory activity, as well as SureChEMBL for recen
264 demonstrate that inactivation of this single PDE gene is sufficient to impact multiple c-di-GMP-depen
265 asured rates of fast cAMP diffusion and slow PDE activity render cAMP compartmentalization essentiall
267 FPs), the identification of subtype-specific PDE-ligand interaction features, and the classification
271 s novel strategies to therapeutically target PDE function, including enhancing catalytic activity, no
273 ontent, and significantly higher levels than PDEs of the endothelial proteins vascular cell adhesion
274 sults using PDE8 as a model PDE, reveal that PDEs mediate active hydrolysis of cAMP bound to its rece
278 gests a role for substrate channeling in the PDE-dependent dissociation and hydrolysis of cAMP bound
279 cally interpretable mechanistic forms of the PDE terms which provides new insights into the biologica
281 l domain and the linker connecting it to the PDE domain are disordered in the reported crystal struct
286 creasing the expression or activity of these PDEs may, therefore, retard the development of PKD.
287 ants tested, deletions of six DGCs and three PDEs were found to affect these phenotypes at low temper
289 hod for learning optimized approximations to PDEs based on actual solutions to the known underlying e
292 patients on PDE3i demonstrated higher total PDE-specific (74.6+/-13.8 pmol/mg per minute) and PDE3-s
293 -based approach coupled with treatment using PDE isozyme-selective inhibitors to characterize the pho
294 vance, in that this identifies and validates PDE-4 inhibition as potential therapeutic intervention f
295 ow that compared to the parental strain, VP3 PDE mutant RVs replicated at low levels in the small int
296 d endothelial nitric oxide synthase, whereas PDEs had significantly higher levels of platelet glycopr
297 study, we analyzed tissue from a child with PDE as well as control human and murine brain to determi
298 Therapies for some of these disorders with PDE inhibitors have been successful at increasing cGMP l