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1 PER alone has no effect on CLOCK-BMAL1-activated transcr
2 PER and CRY proteins form heterodimers and suppress the
3 PER and TIM negatively feed back on CLK/CYC transcriptio
4 PER and TIM shift from the cytoplasm to the nucleus dail
5 PER for measuring rates of VF decay is a robust indicato
6 PER fragment alignment increased the coverage 3-fold com
7 PER fragment alignment with long-range splicing confirme
8 PER inhibits the activity of E75 on the Clk promoter, th
9 PER represses by displacing CLOCK-BMAL1 from promoters i
10 PER synthesis happens in a programmable, autonomous, in
13 vates the aryl hydrocarbon receptor (AHR), a PER, ARNT, SIM (PAS) family transcription factor that re
18 ts are lost in per (0) mutants, supporting a PER-dependent inhibition of tim mRNA deadenylation by PO
19 se data indicate that TYF potently activates PER translation in pacemaker neurons to sustain robust r
21 tic perturbation of the NRON complex affects PER and CRY protein nuclear translocation, dampens ampli
26 nts, we show that the stabilities of CRY and PER are independently regulated, contrary to the expecta
32 clock cells, whereas CLK levels decrease and PER and TIM accumulation are delayed when nmo is overexp
34 rring through the Helix-Loop-Helix (HLH) and PER-ARNT-SIM (PAS) domains, is needed to convert the AhR
35 CRY proteins determine pacemaker period, and PER/CRY complexes have been proposed to afford mutual st
36 Therefore, interaction between the POR and PER is necessary for context-guided exploratory behavior
40 esults suggest that, in addition to CRYs and PERs, the GM129 protein contributes to the transcription
41 is susceptible to disruption by both FAD and PERs, suggesting a new avenue for pharmacological target
42 edure showed that PER-independent as well as PER-dependent mechanisms could sustain circadian express
44 member of the basic helix-loop-helix (bHLH)/PER-ARNT-SIM (PAS) transcription superfamily, is known t
48 t TIM attenuates transcriptional feedback by PER in cultured cells, suggesting that it holds PER in t
49 s may either be repressed or de-repressed by PER, depending on the particular promoter regulatory ele
52 the functional relationship between the CKI-PER and FBXL3-CRY pathways, we generated robust mechanis
53 of the circadian oscillator by altering CLK, PER, and TIM expression, thereby contributing to the gen
57 ns accumulate, form a large nuclear complex (PER complex), and bind the transcription factor CLOCK-BM
67 mparable with that of the perirhinal cortex (PER) with regard to the lateral entorhinal cortex (LEC).
71 by a "blocking"-type mechanism and that CRY-PER inhibits CLOCK-BMAL1 by a "displacement"-type mechan
73 th in vitro and in vivo experiments, the CRY-PER-mediated repression in vivo seemed in conflict with
75 ngle-particle EM of two purified cytoplasmic PER complexes revealed approximately 20-nm and approxima
78 t (DBT(S)), all mutants produce differential PER degradation profiles that show direct correspondence
83 ms were eliminated and rhythms in endogenous PER abundance and phosphorylation were severely compromi
84 ny by increasing cAMP and PKA, which enhance PER stability and decrease clock speed in intrinsically
86 ption and the known role of PDF in enhancing PER/TIM stability occur via independent pathways downstr
87 and epsilon (CK1delta/epsilon) are essential PER kinases, but it is clear that additional, unknown me
88 on PER-dependent behavioral tasks and fewer PER principal neurons are activated by stimuli, but the
94 (2), and with the de novo recalculation from PER predictions were 2.95 dB and 17.49 dB(2), respective
95 tor consisting of two basic helix-loop-helix PER-ARNT-SIM (bHLH-PAS) domain protein subunits, CLOCK a
96 leep-wake cycle via 2 basic helix-loop-helix PER-ARNT-SIM (bHLH-PAS) domain proteins-CLOCK and BMAL1.
97 r and a member of the basic helix-loop-helix PER/ARNT/SIM family of chemosensors and developmental re
98 S3 are members of the basic helix-loop-helix-PER-ARNT-SIM (bHLH-PAS) family, and their genetic defici
100 to afford mutual stabilization, although how PER and CRY proteins with contrasting stabilities intera
101 man A1PI (Hu-recA1PI) expressed in the human PER.C6 cell line using an array of analytical and bioche
103 d genetic studies have shown that changes in PER phosphorylation kinetics are associated with changes
109 creased the abundance of basal and inducible PER proteins, which facilitated circadian clock resettin
110 horylation at these sites does not influence PER stability, timing of nuclear entry, or transcription
111 onditioning), during shock (remote ischemic "PER"conditioning), or during resuscitation (remote ische
112 e ischemic preconditioning, remote ischemic "PER"conditioning, and remote ischemic "POST"conditioning
114 that both proline-rich (PR) and PERIOD-like (PER) domains, in addition to the critical role of C2 dom
115 r members of these phyla, and a new lineage, PER, via cultivation-independent recovery of 49 partial
117 SO1) to validate the safety of mHK2-ASO1/MET/PER combination therapy in mice bearing murine multiple
122 We propose that proper level of nuclear PER-TIM accumulation is necessary to facilitate kinase r
123 le electron microscopy (EM) revealed nuclear PER complexes purified from mouse liver to be quasi-sphe
124 e protein kinase encoding gene KERNEL NUMBER PER ROW6 (KNR6) determines pistillate floret number and
126 TIM(S1404) promotes nuclear accumulation of PER-TIM heterodimers by inhibiting the interaction of TI
127 independent, additive biochemical actions of PER and CRY in circadian control, and complement genome-
132 can regulate temporal abundance/activity of PER by phosphorylation-mediated degradation and cellular
138 er, in the presence of CRY, nuclear entry of PER inhibits transcription by displacing CLOCK-BMAL1 fro
141 phosphorylation-dependent nuclear export of PER-TIM heterodimers to the maintenance of circadian per
142 he absence of CRY very limited expression of PER in a few dorsal clock neurons is able to mediate beh
143 n light:dark can be rescued by expression of PER in either LNv or DN1p clock cells and does not requi
144 K in these mutants rescues the expression of PER in the central clock, but fails to restore behaviora
146 extracts, we elucidate the dual functions of PER as repressor and de-repressor in a context-dependent
147 NB1 is required for timely nuclear import of PER/CRY in the negative feedback regulation of the circa
151 is required for the nuclear localization of PER and point to a key role for the TIM NLS in the regul
154 circadian rhythms by controlling the pace of PER synthesis and presents a novel layer of regulation f
158 fact, much of the reduced phosphorylation of PER in the new tim mutant appears to result from the cyt
161 ces in running speed, as the firing rates of PER interneurons did not show significant velocity modul
163 monstrates that the speed and rhythmicity of PER phosphorylation are controlled by the balance betwee
164 Our findings bring clarity to the role of PER in the dynamic nature of the repressive phase of the
165 ns are activated by stimuli, but the role of PER interneurons in these altered circuit properties in
166 Here, we identified phosphorylation sites of PER-bound TIM by mass spectrometry, given the importance
168 We conclude that optical stimulation of PER at different frequencies can alter visual recognitio
169 findings suggest that optical stimulation of PER at specific frequencies can predictably alter recogn
170 NFAT pathway alter nuclear translocation of PER and CRY proteins and impact circadian rhythms in per
171 With advanced age, rats show deficits on PER-dependent behavioral tasks and fewer PER principal n
172 NEMO/NLK kinase at the "per-short" domain on PER stimulates phosphorylation by DOUBLETIME (DBT/CK1del
173 c cues and suggest that some phosphosites on PER proteins can modulate the pace of downstream behavio
174 ylation by DBT at other more distal sites on PER, including those required for recognition by the F b
177 pt fragment using end reads from overlapping PERs, guided by the expected length of the fragment.
178 HIF is a basic helix-loop-helix (bHLH)-PAS (PER-ARNT-SIM) heterodimer composed of an oxygen-labile H
179 drocarbon receptor (AHR) belongs to the PAS (PER-ARNT-SIM) family transcription factors and mediates
190 uent with24 h) clocks in animals are PERIOD (PER) proteins, transcriptional regulators that undergo d
194 ted to the core circadian clock gene PERIOD (PER), results in arrhythmic molts and continuously abnor
195 ME (CRY) dampens temperature-induced PERIOD (PER)-LUCIFERASE oscillations in dorsal clock neurons.
196 n M cells decreases the amplitude of PERIOD (PER) cycling in DN1 neurons, suggesting that SIK3 non-ce
197 is activation delays the decrease of PERIOD (PER) in the middle of the day and propagates to downstre
198 ster, the idea that nuclear entry of PERIOD (PER) is controlled by its partner protein TIMELESS (TIM)
200 necessary for the phosphorylation of PERIOD (PER), a transcriptional repressor, and CLOCK (CLK), a tr
201 nal/night-biting mosquitoes based on PERIOD (PER) and pigment-dispersing factor (PDF) expression show
202 s in the levels of the clock protein Period (PER) as well as more modest effects on Timeless (TIM).
204 rcadian oscillations of the proteins PERIOD (PER) and TIMELESS (TIM) are hallmarks of a functional cl
205 n Drosophila, key pacemaker proteins PERIOD (PER) and TIMELESS (TIM) are progressively phosphorylated
206 sms by which the circadian repressor PERIOD (PER) inhibits CLOCK/CYCLE (CLK/CYC)-mediated transcripti
207 ter by the transcriptional repressor PERIOD (PER), indicating that the majority of CLK targets are re
208 Mounting evidence suggests that PERIOD (PER) proteins play a central role in setting the speed (
209 imers activate the expression of the period (PER) and cryptochrome (CRY) genes acting as transcriptio
211 iptional feedback loop, in which the PERIOD (PER) and TIMELESS (TIM) proteins repress the expression
213 y a feedback loop in which the three PERIOD (PER) proteins, acting in a large complex, inhibit the tr
214 by a negative feedback loop in which PERIOD (PER) proteins accumulate, form a large nuclear complex (
216 negative elements (FREQUENCY [FRQ], PERIODS [PERs], and CRYPTOCHROMES [CRYs]) are understood to inhib
220 Additionally, expression of artificial PM-PER tethers is sufficient to restore retention in inp1De
221 e first known plasma membrane-peroxisome (PM-PER) tether by demonstrating that Inp1 meets the predefi
222 e first molecular characterization of the PM-PER tether and show it anchors peroxisomes at the mother
223 raction with its direct target gene products PER and CRY, suggesting that the ratio between the negat
224 onships, a light pulse causes more prominent PER degradation in pdf(01) circadian neurons than in wil
227 ian CRYs associate with the Period proteins (PERs) and together inhibit the transcription of their ow
228 and uncertainty in particle emission rates (PERs, #/min) measured by chamber systems still remain, o
229 ng was observed in both young and aged rats, PER interneurons recorded from old animals had lower fir
230 uce the concept of primer exchange reaction (PER) cascades, which grow nascent single-stranded DNA wi
234 ng behavior, the proboscis extension reflex (PER), elicited when external food cues are interpreted a
235 g sites in the hTERT proximal exonic region (PER) and determine their functional relevance in mediati
236 All pathogenic variant enriched regions (PERs) identified are available online through "PER viewe
238 key role for the NRON complex in regulating PER/CRY subcellular localization and circadian timekeepi
239 damage suggests that photoenzymatic repair (PER) is an important DNA repair mechanism used by marine
240 Taken together with a previously reported PER structure in which alphaF extends, these data indica
241 The structure of a central, 346-residue PER fragment reveals two associated PAS (Per-Arnt-Sim) d
243 ere, a dynamic analysis of the size-resolved PER is conducted through a comparative study of chamber
248 d protein kinase A (PKA) activity stabilizes PER, in S2 tissue culture cells and in fly circadian neu
249 time-lapse fluorescence microscopy we study PER stability in the presence of DBT and its short, long
251 y the kinase Doubletime (DBT) and subsequent PER turnover is an essential step in the functioning of
252 , additional kinases are predicted to target PER, TIM, and/or CLK to promote time-specific transcript
253 Finally, an SCN graft procedure showed that PER-independent as well as PER-dependent mechanisms coul
254 e nucleus daily, and the length of time that PER and TIM reside in the cytoplasm is an important dete
255 ate molting cycles in much the same way that PER-based oscillators drive rhythmic behaviors and metab
262 These findings provide a function for the PER complex and a molecular mechanism for circadian cloc
266 R to MEC are functionally different from the PER-to-LEC counterpart in providing an excitatory drive
267 molecular event recorder that records in the PER transcript the order in which distinct RNA inputs ar
268 -induced mutation, early doors (Edo), in the PER-ARNT-SIM (PAS) domain dimerization region of period
270 ations contribute to the oscillations of the PER and TIM proteins but few posttranscriptional mechani
271 his study, we showed that stimulation of the PER could increase or decrease exploration of novel and
272 r cells demonstrate that a sub-region of the PER exhibits strong transcriptional repressive activity.
273 rotein (PYP), a 125-residue prototype of the PER-ARNT-SIM (PAS) domain superfamily of signaling prote
274 rily regulates the accumulating phase of the PER-CRY repressive complex by controlling the nuclear im
278 criptional inhibitory complexes and that the PER complex thereby rhythmically delivers histone deacet
282 Deep sampling of the transcriptome using the PER protocol presents the opportunity to reconstruct the
283 Our analysis indicates that PSF within the PER complex recruits SIN3A, a scaffold for assembly of t
284 e found that in mouse liver nuclei all three PERs, both CRYs, and Casein Kinase-1delta (CK1delta) are
285 periodicity is determined primarily through PER phosphorylation kinetics set by the balance between
286 Rs) identified are available online through "PER viewer," a user-friendly online platform for interac
288 LE (CLK-CYC) activators and PERIOD-TIMELESS (PER-TIM) repressors are feedback loop components whose t
289 LE (CLK-CYC) activators and PERIOD-TIMELESS (PER-TIM) repressors to drive rhythmic transcription peak
292 ments for different materials underestimated PER by up to an order of magnitude and overestimated par
296 n clock is built on a feedback loop in which PER and CRY proteins repress their own transcription.
298 ow unite REV-ERB-alpha and REV-ERB-beta with PER, CRY and other components of the principal feedback