ライフサイエンスコーパス: Paracoccus denitrificans

1 ry oxidases from Rhodobacter sphaeroides and Paracoccus denitrificans).

2 t mitochondria, Rhodobacter sphaeroides, and Paracoccus denitrificans).

3 this process has been studied extensively in Paracoccus denitrificans.

4 nters of nitrous oxide reductase (N2OR) from Paracoccus denitrificans.

5 Parabactin was extracted from cultures of Paracoccus denitrificans.

6 ytochromes to the cytochrome c peroxidase of Paracoccus denitrificans.

7 one production by Rhodobacter capsulatus and Paracoccus denitrificans.

8 ration during hypoxia, as does the bacterium Paracoccus denitrificans.

9 ion from previous work with the oxidase from Paracoccus denitrificans.

10 the CuA sites in COX of bovine heart and of Paracoccus denitrificans.

11 uA center in cytochrome c oxidase (COX) from Paracoccus denitrificans.

12 o those of the native CuA center in COX from Paracoccus denitrificans.

13 on (PDB code 1occ) and of the soil bacterium Paracoccus denitrificans (1arl) include a dicopper cente

14 of complex I from the alpha-proteobacterium Paracoccus denitrificans, a close relative of the mitoch

15 igands to the native type I copper center of Paracoccus denitrificans amicyanin was replaced with the

16 g with antibodies raised against subunits of Paracoccus denitrificans and against synthetic peptides

17 l structures of the cytochrome oxidases from Paracoccus denitrificans and bovine.

18 Cytochrome aa3 from Paracoccus denitrificans and cytochrome ba3 from Thermus

19 between the cytochrome c peroxidase (CCP) of Paracoccus denitrificans and cytochromes c.

20 This is similar to COX from Paracoccus denitrificans and is in contrast to the bovin

21 acter sphaeroides is specifically related to Paracoccus denitrificans and Rc. gelatinosa is related t

22 t is a novel inhibitor of the F1FO-ATPase of Paracoccus denitrificans and related alpha-proteobacteri

23 lly simpler bacterial counterpart (NDH-1) in Paracoccus denitrificans and Thermus thermophilus HB-8 c

24 with structures of Rhodobacter sphaeroides, Paracoccus denitrificans, and bovine CcO derived by crys

25 ic to a bacterium related to R. sphaeroides, Paracoccus denitrificans, and is lethal to R. sphaeroide

26 e key factors in the bet-hedging strategy of Paracoccus denitrificans, and that systems scavenging NO

27 Atp11p from Candida glabrata and Atp12p from Paracoccus denitrificans, and we show that some features

28 we develop and present the a-proteobacterium Paracoccus denitrificans as a suitable bacterial model s

29 Control strains were Paracoccus denitrificans ATCC 17741(T), P. versutus ATCC

30 in the dimeric cytochrome bc(1) complex from Paracoccus denitrificans by characterizing the kinetics

31 previous papers, cytochrome c peroxidase of Paracoccus denitrificans can accommodate horse cytochrom

32 Cloning and sequencing of the Paracoccus denitrificans ccmG gene indicates that it cod

33 We successfully reconstituted Paracoccus denitrificans complex I into circularised nan

34 The NADH-quinone oxidoreductase from Paracoccus denitrificans consists of 14 subunits (Nqo1-1

35 ating NADH-quinone oxidoreductase (NDH-1) of Paracoccus denitrificans consists of at least 14 unlike

36 Paracoccus denitrificans contains an unusual arrangement

37 chemical changes in the P(M) intermediate of Paracoccus denitrificans cytochrome c oxidase have been

38 The structure of the P(M) intermediate of Paracoccus denitrificans cytochrome c oxidase was invest

39 es of P(M) and F intermediates of bovine and Paracoccus denitrificans cytochrome c oxidase were inves

40 Paracoccus denitrificans cytochrome C550 is expressed as

41 Paracoccus denitrificans ETF has the identical function,

42 he three-dimensional structures of human and Paracoccus denitrificans ETFs determined by X-ray crysta

43 Our work with the model denitrifying strain Paracoccus denitrificans further shows that ligand-enhan

44 ic quinohemoprotein amine dehydrogenase from Paracoccus denitrificans has been determined at 2.05-A r

45 quinoprotein methylamine dehydrogenase from Paracoccus denitrificans has been refined at 1.75 A reso

46 oxidases, the equivalent tryptophan (W121 in Paracoccus denitrificans) has been identified as the "el

47 ccinate:ubiquinone oxidoreductase (SQR) from Paracoccus denitrificans have been undertaken in the pur

48 residue in both Saccharomyces cerevisiae and Paracoccus denitrificans have indicated that mutations a

49 of these ligands in supporting the growth of Paracoccus denitrificans in a low-iron environment and t

50 he zinc-specific SBP AztC from the bacterium Paracoccus denitrificans in the zinc-bound and apo-state

51 ATP synthase from the alpha-proteobacterium Paracoccus denitrificans, inhibited by its natural regul

52 Amicyanin from Paracoccus denitrificans is a type 1 copper protein with

53 ating NADH-quinone oxidoreductase (NDH-1) of Paracoccus denitrificans is composed of 14 different sub

54 ating NADH-quinone oxidoreductase (NDH-1) of Paracoccus denitrificans is composed of 14 different sub

55 e- (NADH-) quinone oxidoreductase (NDH-1) of Paracoccus denitrificans is composed of at least 14 diff

56 ating NADH-quinone oxidoreductase (NDH-1) of Paracoccus denitrificans is composed of at least 14 subu

57 ating NADH-quinone oxidoreductase (NDH-1) of Paracoccus denitrificans is composed of at least 14 unli

58 We demonstrate that NarK from Paracoccus denitrificans is expressed as a fusion of two

59 esidues (Trp(beta)(57) and Trp(beta)(108) in Paracoccus denitrificans MADH).

60 Paracoccus denitrificans methylamine dehydrogenase (MADH

61 , we show that in the denitrifying bacterium Paracoccus denitrificans, NarJ serves as a chaperone for

62 We demonstrated that in the Paracoccus denitrificans NDH-1 subunit, Nqo7 (ND3) direc

63 1-14, encode subunits homologous to those of Paracoccus denitrificans NDH-1, respectively, and are ar

64 Molecular properties of the NQO9 subunit of Paracoccus denitrificans NDH-1, which is predicted to co

65 The enzyme from Paracoccus denitrificans (NorBC) contains two subunits;

66 reported for the homologous D477A mutant of Paracoccus denitrificans or for bovine COX (K(d) = 1-3 m

67 y dependent on haem-iron as a cofactor (e.g. Paracoccus denitrificans) or a Nir that is solely depend

68 dicted from the known processing site of the Paracoccus denitrificans oxidase, does not produce the s

69 proteome of the soil denitrifying bacterium Paracoccus denitrificans PD1222 was analysed with nitrat

70 ification inhibition in a model denitrifier, Paracoccus denitrificans Pd1222.

71 esolution structure of the related MADH from Paracoccus denitrificans recently reported.

72 The NO reductase from Paracoccus denitrificans reduces NO to N2O (2NO + 2H(+)

73 sis of methylamine dehydrogenase (MADH) from Paracoccus denitrificans requires four genes in addition

74 sis of methylamine dehydrogenase (MADH) from Paracoccus denitrificans requires four genes in addition

75 alculations on the cytochrome c oxidase from Paracoccus denitrificans revealed an unexpected coupling

76 he amino acid sequence of cytochrome c550 of Paracoccus denitrificans strain LMD 52.44 was determined

77 dditionally conserved in Pichia pastoris and Paracoccus denitrificans, suggesting that they are funct

78 oligopeptide permease (opp) gene cluster of Paracoccus denitrificans that lacks any observable react

79 In Paracoccus denitrificans, the pathway-specific two-compo

80 The three-dimensional fold of Paracoccus denitrificans TIR is identical to that observ

81 ms from methane-acclimated sludge (including Paracoccus denitrificans) to facilitate electron transfe

82 Threonine 244 in the alpha subunit of Paracoccus denitrificans transfer flavoprotein (ETF) lie

83 based on the biological reduction of N2O by Paracoccus denitrificans using methanol as a carbon/elec

84 of electron transfer flavoprotein (ETF) from Paracoccus denitrificans was determined and refined to a

85 of the Type I copper protein, amicyanin from Paracoccus denitrificans was determined at 1.8 A resolut

86 rystal structure of a new cluster 9 SBP from Paracoccus denitrificans we have called AztC.

87 f this putative accessory factor (AztD) from Paracoccus denitrificans, we have analyzed its transcrip

88 ria (from Bos taurus) and from the bacterium Paracoccus denitrificans, we show that four protons are

89 , also observed in cytochrome c oxidase from Paracoccus denitrificans, were similarly associated with

90 species, such as Rhodobacter sphaeroides and Paracoccus denitrificans, which contain an additional mi

91 In contrast, Paracoccus denitrificans, which has membrane-bond NO(3)

92 ing NADH-quinone oxidoreductase (NDH-1) from Paracoccus denitrificans, which is composed of the NQO1

93 Human and Paracoccus denitrificans wild-type electron transfer fla

94 of the type I copper protein amicyanin from Paracoccus denitrificans with cobalt.

95 Expression in Paracoccus denitrificans yielded no holoprotein.

96 unction, as revealed by the structure of the Paracoccus denitrificans zeta-subunit in complex with AD