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1  discovery of nucleotide deletion editing in Physarum.
2 op of tRNALys from Didymium and tRNAGlu from Physarum.
3 pid intracellular reorganization observed in Physarum.
4                   The inspiration comes from Physarum, a unicellular slime mold capable of solving th
5 -nucleus cells, we analyzed states in single Physarum amoebal cells.
6                           Analogous tRNAs in Physarum and Didymium have editing sites at different lo
7 ost, gained, or both since the divergence of Physarum and Didymium.
8 g and resembles the mRNA and rRNA editing in Physarum and Didymium.
9    We have cloned the cDNA for the mtRNAP of Physarum and have expressed the mtRNAP in Escherichia co
10 ertion editing found in the mitochondrion of Physarum, (c) the C-to-U substitution editing of the mam
11  Besides exhibiting individual intelligence, Physarum can also share information with other Physarum
12 verlapped to some extent, but those based on Physarum centrality contain local and global information
13 hs and fluid flow were used to formulate the Physarum centrality measure.
14                 Our results suggest that the Physarum centrality presents a trade-off between the deg
15 determined full transcriptome information of Physarum dramatically improves the accuracy of computati
16 l RNA polymerase argue that the mechanism of Physarum: editing is distinct from that of other co-tran
17         RNA editing is extremely accurate in Physarum; however, little is known about its mechanism.
18                     These characteristics of Physarum imply that spawning many such organisms we can
19  strong evidence that insertional editing in Physarum is mechanistically distinct from editing in kin
20            The most frequent editing type in Physarum is the insertion of individual Cs.
21 bstrate for nucleotide insertion in isolated Physarum mitochondria.
22                                      RNAs in Physarum: mitochondria contain extra nucleotides that ar
23  The dissection of RNA editing mechanisms in PHYSARUM: mitochondria has been hindered by the absence
24                                Maturation of Physarum mitochondrial RNA involves the highly specific
25 d sites of partial and extragenic editing in Physarum mitochondrial RNAs, as well as an additional 77
26 ost likely involves transient pausing by the Physarum: mitochondrial RNA polymerase.
27 a, insertion of non-encoded nucleotides into PHYSARUM: mitochondrial RNAs is closely linked to transc
28 he insertion of non-encoded nucleotides into PHYSARUM: mitochondrial RNAs.
29 gulating biological concept adopted from the Physarum model, thereby allowing the identification of o
30 gated in structural brain networks using the Physarum model.
31 d in vitro transcription assays based on the Physarum mtRNAP to identify a novel activity associated
32 tion, and argues that insertional editing in Physarum occurs with a 5' to 3' polarity.
33 ysarum can also share information with other Physarum organisms through fusion.
34   Networks of protoplasmic tubes of organism Physarum polycehpalum are macro-scale structures which o
35 l as for the PAF-AH from the lower eukaryote Physarum polycephalum although pPAF-AH and PAF-AH(II) to
36 g two organisms from the Myxomycetes, namely Physarum polycephalum and Didymium iridis, allows us to
37    tRNAs encoded on the mitochondrial DNA of Physarum polycephalum and Didymium nigripes require inse
38 transcribed from the mitochondrial genome of Physarum polycephalum are edited by the insertion of non
39 transcribed from the mitochondrial genome of Physarum polycephalum are heavily edited.
40        We show that the brainless slime mold Physarum polycephalum constructs a form of spatial memor
41  other unicellular organisms, the slime mold Physarum polycephalum forms a giant network-shaped plasm
42 rk controlling commitment and sporulation of Physarum polycephalum from experimental results using a
43                               The slime mold Physarum polycephalum grows as a random network of tubes
44 tes across its network remains a puzzle, but Physarum polycephalum has emerged as a novel model used
45 ial transcriptome analysis of the slime mold Physarum polycephalum in the plasmodium state under diff
46 case in point is the mitochondrial genome of Physarum polycephalum in which only about one-third of t
47                   Insertional RNA editing in Physarum polycephalum is a complex process involving the
48                                              Physarum polycephalum is a large multinucleated amoeboid
49                                  Slime mould Physarum polycephalum is a single cell visible by the un
50                                              Physarum Polycephalum is a single cell visible by unaide
51 e cytochrome b apoprotein in mitochondria of Physarum polycephalum is created by the insertion of 43
52                     The acellular slime mold Physarum polycephalum provides an excellent model to stu
53  follow how the giant unicellular slime mold Physarum polycephalum responds to a nutrient source.
54 hnique in the naturally synchronous organism Physarum polycephalum to examine the fate of core histon
55 m the myxomycetes Stemonitis flavogenita and Physarum polycephalum using a modified anchor PCR approa
56               Plasmodial transglutaminase of Physarum polycephalum was purified by anion exchange and
57 wo slime molds (Dictyostelium discoideum and Physarum polycephalum), and the roundworm (Caenorhabditi
58                   Among them, the slime mold Physarum polycephalum, a giant single cell, is ideally s
59 articular interest due to its resemblance to Physarum polycephalum, ability to leverage parallel proc
60 a mobile group I intron in the rRNA genes of Physarum polycephalum, also can home into yeast chromoso
61  the co-transcriptional nature of editing in Physarum polycephalum, and will certainly provide future
62  intron found in the ribo-somal RNA genes of Physarum polycephalum, encodes the I-PpoI homing endonuc
63 nes from the myxomycetes Didymium iridis and Physarum polycephalum, indicating evolutionary conservat
64 e, a homing endonuclease from the slime mold Physarum polycephalum, is a small enzyme (2 x 20 kDa) of
65 ron-encoded endonuclease from the slime mold Physarum polycephalum, is a small enzyme (2 x 20 kDa) th
66                            In the myxomycete Physarum polycephalum, nucleotides that are not specifie
67 nals among decentralized units in slime mold Physarum polycephalum, we introduce a combination of sur
68         Nuclei in G2 phase of the slime mold Physarum polycephalum, when transplanted, by plasmodial
69 tp8 genes within the mitochondrial genome of Physarum polycephalum, which had gone undetected by exis
70 been observed in the mitochondrial genome of Physarum polycephalum.
71  the global regulation of DNA replication in Physarum polycephalum.
72 ethod to the mitochondrion of the slime mold Physarum polycephalum.
73  nuclei and nuclear matrix from plasmodia of Physarum polycephalum.
74 endonuclease was I-PpoI from the slime mould Physarum polycephalum.
75  by a group I intron found in the slime mold Physarum polycephalum.
76 ort a remarkable exception in the slime mold Physarum polycephalum.
77 ion in the prototypical vascular networks of Physarum polycephalum.
78 ngle-celled organisms such as the slime mold Physarum polycephalum.
79          The large cell size, in the case of Physarum reaching centimeters and more, challenges the c
80 ntage (23%) of noncytidine insertions of any Physarum RNA characterized to date.
81 ly support a co-transcriptional mechanism of Physarum: RNA editing in which non-encoded nucleotides a
82 ify nuclei dynamics and cytoplasmic flows in Physarum's tubular network.
83 onstrate this novel approach, developing the Physarum Steiner Algorithm which is capable of finding f
84  the complete mitochondrial transcriptome of Physarum using Illumina deep sequencing of purified mito
85 of a mobile, self-splicing Group I intron in Physarum was exploited.