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1 classified as not, partially, or completely RNA dependent.
2 on of HDAC1/2 and SRSF1 to the gene body was RNA-dependent.
3 The association between PABPC1 and hEndoV is RNA dependent and furthermore, PABPC1 stimulates hEndoV
4 ranscriptionally active chromatin in both an RNA-dependent and -independent manner and that this asso
6 the transcription factor CTCF as completely RNA dependent, and we uncovered that RNA is required for
8 irment of DHX9/EWS-FLI1 interaction promoted RNA-dependent association of Sam68 with DHX9 and recruit
10 lex at high pH and increases Delta247-Brr2's RNA-dependent ATPase activity and the extent of RNA unwi
11 l RNA helicase activities, as exemplified by RNA-dependent ATPase activity and unwinding of the DNA-R
13 hese Psis interact genetically with Prp5, an RNA-dependent ATPase involved in monitoring the U2 BSRR-
15 uited to active genes and interacts with the RNA-dependent ATPase Sub2 to facilitate the formation of
17 ptional RNA processing factors including the RNA-dependent ATPase UAP56/DDX39B and histone modifiers
20 heir stability and dynamics, suggesting that RNA-dependent capsid dynamics play an important biologic
21 teracts with eRNAs, stimulation manifests in RNA-dependent changes in the histone acetylation mediate
26 lectively, our data provide novel insight in RNA-dependent DDR by coupling DSB-induced c-Abl activity
28 s of the large and highly abundant family of RNA-dependent DEAD-box ATPases (DDXs)(3) are regulators
32 017) describe how the Rad52 protein mediates RNA-dependent DNA double-strand break repair via inverse
33 viously, it was reported that mutants in the RNA-dependent DNA methylation (RdDM) pathway might be in
35 n tubes of mutants defective for MET1, DDM1, RNA-dependent DNA methylation, or MSI-dependent histone
37 This is reminiscent of naturally occurring RNA-dependent DNA polymerases, including telomerase, whi
38 RNA)-guided RNase that also possesses target RNA-dependent DNase and cyclic oligoadenylate (cOA) synt
46 ated CRISPR-Cas variants might mediate guide RNA-dependent integration of the respective transposons.
47 eq, we investigated the functional impact of RNA-dependent interaction between JMJD6 and U2AF65, reve
48 lation-mimicking mutation K376Q impaired the RNA-dependent interaction of G3BP1 with poly(A)-binding
51 unctions as a molecular switch that triggers RNA-dependent LLPS in response to a rise in intracellula
53 nds to pericentromeric heterochromatin in an RNA-dependent manner and that Vgl1 deletion leads to los
55 ion interferes with IFIT1 binding, but in an RNA-dependent manner, whereas translation assays reveal
62 circuits, including multistage cascades and RNA-dependent networks that can be rewired with Csy4 to
66 code a proof-reading deficient, low-fidelity RNA-dependent polymerase (RdRp), which generates genetic
69 situation and show that the double-stranded RNA-dependent protein kinase (PKR) is involved in the lo
70 AV L(pro) interfered with phosphorylation of RNA-dependent protein kinase (PKR) or eIF2alpha, indicat
71 eIF-2alpha kinases including double-stranded RNA-dependent protein kinase (PKR), which has been recen
72 cted, which results in the activation of the RNA-dependent protein kinase (PKR)-mediated stress respo
74 rt that in HeLa cells, activation of a PERK (RNA-dependent protein kinase [PKR]-like ER kinase)-eIF2a
75 protein interferon-inducible double-stranded RNA-dependent protein kinase activator A), the product o
77 oester-dependent peptide ligations preceding RNA-dependent protein synthesis during the evolution of
78 of the MS dataset to automatically identify RNA-dependent proteins (proteins whose interactome depen
79 d, and enrichment-free screen called R-DeeP (RNA-dependent proteins), based on density gradient ultra
80 ntitative mass spectrometry identified 1,784 RNA-dependent proteins, including 537 lacking known link
81 uencing reveals that recCas9 catalyzes guide RNA-dependent recombination in human cells with an effic
82 w that several hit compounds can prevent the RNA-dependent recruitment of the ALS-associated RNA-bind
84 l enhancers requires assembly of an enhancer RNA-dependent ribonucleoprotein (eRNP) complex exhibitin
86 l PPIs including the homodimerization of the RNA dependent RNA polymerase (RdRp), the self-interactio
87 h the only protein present is the poliovirus RNA dependent RNA polymerase (RdRp), which recapitulates
92 h is transcribed and replicated by the viral-RNA-dependent RNA polymerase (FluPol(A)) composed of PB1
94 on between arenavirus nucleoprotein (NP) and RNA-dependent RNA polymerase (L protein), the two trans-
95 es are catalyzed by a complex comprising the RNA-dependent RNA polymerase (L) and the tetrameric phos
96 een the hemagglutinin-neuraminidase (HN) and RNA-dependent RNA polymerase (L) genes of the PIV5 genom
99 stributed within other regions of E, the NS5 RNA-dependent RNA polymerase (NS5POL) domain, and the TM
103 nce the amplification of the viral siRNAs by RNA-dependent RNA polymerase (RdRP) 1 (RDR1) and RDR6 an
104 s have suggested that multiple copies of the RNA-dependent RNA polymerase (RdRp) 3D are involved in t
105 of two extensively interacting subunits: an RNA-dependent RNA polymerase (RdRP) and an NTPase VP4.
106 eEF1A) in control of activation of the viral RNA-dependent RNA polymerase (RdRp) and regulation of th
107 wo conserved amino acid substitutions in the RNA-dependent RNA polymerase (RdRp) and six in the capsi
108 substitutions in the thumb subdomain of the RNA-dependent RNA polymerase (RdRp) and the methyltransf
112 pped dsRNAs, the largest of which encodes an RNA-dependent RNA polymerase (RdRP) containing a unique
115 ich the tandem methyltransferase (MTase) and RNA-dependent RNA polymerase (RdRp) domains stack into o
116 itu structures of the intermediate stages of RNA-dependent RNA polymerase (RdRp) during transcription
117 ngle-stranded RNA virus that encodes its own RNA-dependent RNA polymerase (RdRp) for nucleic acid syn
119 ghlight the central role played by the viral RNA-dependent RNA polymerase (RdRp) in the recombination
121 cleotide incorporation fidelity of the viral RNA-dependent RNA polymerase (RdRp) is important for mai
123 port an in vitro RNA synthesis assay for the RNA-dependent RNA polymerase (RdRP) of rabies virus (RAB
126 at transgenic mice expressing a picornavirus RNA-dependent RNA polymerase (RdRP) outside the viral co
127 alone and I212V-S460L in combination) in the RNA-dependent RNA polymerase (RdRp) region of the genome
128 a distinct class of siRNAs synthesized by an RNA-dependent RNA polymerase (RdRP) requires the PIR-1 p
131 ny eukaryotic organisms encode more than one RNA-dependent RNA polymerase (RdRP) that probably emerge
132 RNA viruses replicate via a virally encoded RNA-dependent RNA polymerase (RdRP) that uses a unique p
133 loped, double-strand RNA viruses, package an RNA-dependent RNA polymerase (RdRp) with each duplex of
135 re dengue genome for interactions with viral RNA-dependent RNA polymerase (RdRp), and we identified t
136 th simple genomes that typically encode only RNA-dependent RNA polymerase (RdRP), capping enzyme and
137 influenza virus genome mainly depend on its RNA-dependent RNA polymerase (RdRP), composed of the PA,
138 rotein template and the L protein, which has RNA-dependent RNA polymerase (RdRp), GDP polyribonucleot
139 ing well-defined mutations in the poliovirus RNA-dependent RNA polymerase (RDRP), namely, a G64S muta
141 The VRC consists of the p92 virus-coded RNA-dependent RNA polymerase (RdRp), the viral p33 RNA c
142 dsRNA1 ORF contains motifs representative of RNA-dependent RNA polymerase (RdRp), whereas the dsRNA2
143 synthesis is catalyzed by a multifunctional RNA-dependent RNA polymerase (RdRP), which is composed o
144 etween mitochondrial membranes and the viral RNA-dependent RNA polymerase (RdRp), which is mediated b
146 plication of SARS-CoV-2 depends on the viral RNA-dependent RNA polymerase (RdRp), which is the likely
147 nically express low levels of a picornaviral RNA-dependent RNA polymerase (RdRP), which synthesizes d
159 me of influenza viruses is replicated by the RNA-dependent RNA polymerase (RNAP) via a complementary
161 re that is recognized and bound by the viral RNA-dependent RNA polymerase (RNAP); however, no 3D stru
164 requires nuclear RNA polymerase IV (Pol IV), RNA-dependent RNA polymerase 2 (RDR2) and DICER-like 3 (
165 24-nt siRNAs are dependent on RNA Pol IV and RNA-DEPENDENT RNA POLYMERASE 2 (RDR2) and establish DNA
166 of a physical association between JMJ24 and RNA-dependent RNA polymerase 2 (RDR2), which represents
167 d Pol IV termination-dependent activation of RNA-DEPENDENT RNA POLYMERASE 2, which partners with Pol
168 , we found that METTL3 interacted with viral RNA-dependent RNA polymerase 3D and induced enhanced sum
170 element mRNAs into small RNAs guided by the RNA-dependent RNA polymerase 6 (RDR6) protein and is the
171 n particular, the double-mutant of paps1 and rna-dependent rna polymerase 6 (rdr6) shows a synergisti
172 However, DCL2 facilitates the recruitment of RNA-DEPENDENT RNA POLYMERASE 6 (RDR6) to ARGONAUTE 1-der
175 of NAD(+) capping are instead processed into RNA-dependent RNA polymerase 6-dependent small RNAs, res
176 in, which comprises three enzymatic domains (RNA-dependent RNA polymerase [RdRp], polyribonucleotidyl
177 st of the IPR genes in a manner dependent on RNA-dependent RNA polymerase activity and on DRH-1.
178 roles for ncRNAs, as well as a novel Pol II RNA-dependent RNA polymerase activity that regulates an
181 elity of foot-and-mouth disease virus (FMDV) RNA-dependent RNA polymerase allows FMDV to exhibit high
182 ed as a core ring-like domain containing the RNA-dependent RNA polymerase and an appendage of globula
183 ce gene was identified, shown to code for an RNA-dependent RNA polymerase and to be allelic with Ty-3
184 hod allows accurate fitting of the monomeric RNA-dependent RNA polymerase bound at the threefold axis
185 pecifically impairs the function of the hRSV RNA-dependent RNA polymerase complex notably by reducing
186 lymerase basic 2 (PB2) proteins comprise the RNA-dependent RNA polymerase complex responsible for vir
187 of the genome are rendered accessible to the RNA-dependent RNA polymerase complex, possibly enabling
188 omponents: a helical ribonucleocapsid and an RNA-dependent RNA polymerase composed of a catalytic sub
192 viruses replicate by using a virally encoded RNA-dependent RNA polymerase enzyme that has low fidelit
193 protease/helicase and NS5 methyltransferase/RNA-dependent RNA polymerase form part of the viral repl
196 genome is replicated and transcribed by the RNA-dependent RNA polymerase holoenzyme (subunits nsp7/n
198 a A virus mRNAs are transcribed by the viral RNA-dependent RNA polymerase in the cell nucleus before
199 bonucleosides form a novel class of HCV NS5B RNA-dependent RNA polymerase inhibitors, displaying EC50
201 his context, heterotrimeric viral PA/PB1/PB2 RNA-dependent RNA polymerase is an attractive target for
202 on of the endonuclease activity of influenza RNA-dependent RNA polymerase is attractive for the devel
203 d the subsequent Pro(323)Leu mutation in the RNA-dependent RNA polymerase led to the precipitous spre
205 ocoris ostravirus 1) with a highly divergent RNA-dependent RNA polymerase missed by conventional BLAS
206 Our data uncover a new role for the viral RNA-dependent RNA polymerase NS5B and p7 proteins in con
212 cles and if it showed positive results on an RNA-dependent RNA polymerase or open reading frame 1b ge
213 ost attention is focused on either the viral RNA-dependent RNA polymerase or the main viral protease,
215 mals may have replaced an ancient eukaryotic RNA-dependent RNA polymerase pathway to control transpos
217 products corresponding to virion-associated RNA-dependent RNA polymerase protein (RdRp), glycoprotei
220 findings further our understanding of viral RNA-dependent RNA polymerase structure-function relation
225 ties of Phlebovirus nucleocapsid protein and RNA-dependent RNA polymerase to recognize the untranslat
226 tered inside the nucleocapsid when the viral RNA-dependent RNA polymerase uses it as the template for
227 agment screen on the dengue virus serotype 3 RNA-dependent RNA polymerase using x-ray crystallography
229 oronavirus 2, also known as 2019-nCoV) RdRp (RNA-dependent RNA polymerase) coding sequence, achieving
230 g of heterotypic segments by influenza virus RNA-dependent RNA polymerase, an inhibitory effect of vi
231 onsisting of genomic RNA, nucleoprotein, the RNA-dependent RNA polymerase, and a polymerase cofactor,
232 ns-acting short interfering RNA3 pathway, an RNA-dependent RNA polymerase, and an XH/XP domain-contai
233 ease (3CLpro), papain-like protease (PLpro), RNA-dependent RNA polymerase, and spike (S) protein.
234 s is transcribed and replicated by the viral RNA-dependent RNA polymerase, composed of the subunits P
235 f viral RNA synthesis by the recombinant MNV RNA-dependent RNA polymerase, confirming that the stem-l
236 logical salt conditions, HCV NS5BDelta21, an RNA-dependent RNA polymerase, has poor affinity for the
237 1 (PA-PB1) subunits of influenza virus (Flu) RNA-dependent RNA polymerase, this paper is devoted to t
238 s, identified in the p7 polypeptide and NS5B RNA-dependent RNA polymerase, were sufficient to increas
239 lyzed by the NS5B (nonstructural protein 5B) RNA-dependent RNA polymerase, which is a major target of
251 osttranscriptional gene-silencing components RNA-DEPENDENT RNA POLYMERASE1 and SUPPRESSOR OF GENE SIL
252 on P. patens homologs of DICER-LIKE3 (DCL3), RNA-DEPENDENT RNA POLYMERASE2, and the largest subunit o
253 ced by the activity of ARGONAUTE9 (AGO9) and RNA-DEPENDENT RNA POLYMERASE6 (RDR6), two genes involved
254 marily a replicative process mediated by the RNA-dependent RNA polymerase; (iii) a mutation shown to
255 1 dephosphorylates ppp-RNAs made by cellular RNA-dependent RNA polymerases (RdRPs) and is required fo
261 through the production of small RNAs by two RNA-dependent RNA polymerases (RdRPs) that are thought t
262 atively low fidelity SARS-CoV and SARS-CoV-2 RNA-dependent RNA polymerases (RdRps), serving as an imm
266 oduction of double-stranded RNAs (dsRNAs) by RNA-DEPENDENT RNA POLYMERASEs (RDRs) and proceeds throug
269 ve identified fidelity determinants in viral RNA-dependent RNA polymerases and have shown that RNA vi
273 al clamp, conferring steric hindrance on the RNA-dependent RNA polymerases of diverse positive-strand
274 sponsible for virus replication and cellular RNA-dependent RNA polymerases responsible for gene silen
275 of mutations in virus-derived siRNAs: viral RNA-dependent RNA polymerases responsible for virus repl
276 such as influenza, encode large, multidomain RNA-dependent RNA polymerases that can both transcribe a
277 lication showed the contribution of cellular RNA-dependent RNA polymerases to the generation of mutat
279 G tails promote gene silencing by recruiting RNA-dependent RNA polymerases, which use pUG-tailed RNAs
280 ling those of RNA primases or even canonical RNA-dependent RNA polymerases, while more recent studies
281 ty in RNA viruses has been attributed to the RNA-dependent RNA polymerases, with mutations in RdRps f
288 includes Ebola and rabies viruses, catalyze RNA-dependent RNA polymerization with viral ribonucleopr
289 (or Main) protease (3CL(pro)) and the nsp12 RNA-dependent RNA-polymerase (RdRp) are the best charact
295 optimization of non-nucleoside dengue viral RNA-dependent-RNA polymerase (RdRp) inhibitors are descr
298 angible mechanism for a previously suspected RNA-dependent route of Fluorouracil-mediated cytotoxicit
299 TFs and RBPs, as exemplified by YY1, a known RNA-dependent TF, and RBM25, an RBP involved in splicing