ライフサイエンスコーパス: admixture

1 00-59,400 years ago (considering Neanderthal admixture).

2 ar and computationally more efficient (i.e., ADMIXTURE).

3 g SOMO of 6d(z(2)) character with 7s Rydberg admixture.

4 y and data simulated under various models of admixture.

5 xchanged genetic materials with them through admixture.

6 ameters simultaneously with those describing admixture.

7 and long-range migration events followed by admixture.

8 history of population size, subdivision, and admixture.

9 inference of recent single- or multiple-wave admixture.

10 ican demonstrated a high degree of ancestral admixture.

11 ses health risks e.g. from possible methanol admixture.

12 e but instead formed through ancient genetic admixture.

13 lusive private haplotype) signalling ongoing admixture.

14 via the parallel-processing capabilities of ADMIXTURE.

15 erindian genes in spite of known contact and admixture.

16 ocesses such as natural selection or hominin admixture.

17 nsions, population structure, migration, and admixture.

18 om South America, with almost no evidence of admixture.

19 om other clades displayed variable levels of admixture.

20 ACC, which might have promoted dispersal and admixture.

21 dant genomic regions consistent with ancient admixture.

22 facilitated by inter-specific/inter-generic admixtures.

23 inference of histories of complex population admixtures.

24 se of partial replacement of PC with mineral admixtures.

25 19.3 +/- 2.7 cm H2O; p < 0.001), and venous admixture (0.05 +/- 0.01 vs 0.22 +/- 0.03, p < 0.001) an

26 inuum of populations with varying degrees of admixture among African, European, and Amerindigenous an

27 t, correlates and predicts levels of genetic admixture among European early farmers.

28 We detect minimal admixture among neighboring groups between ~2,000-500 BP

29 Admixture analyses and estimation of shared haplotypes w

30 Demographic and admixture analyses showed that, though Jeju horse is gen

31 cross Polynesia for signs of Native American admixture, analysing 807 individuals from 17 island popu

32 The ADMIXTURE analysis determined signatures of admixture in

33 Surprisingly, admixture analysis revealed evidence of shared ancestry

34 ADMIXPIPE successfully integrates ADMIXTURE analysis with popular variant call format (VCF

35 ing geographical locations as covariates for admixture analysis.

36 The roles of migration, admixture and acculturation in the European transition t

37 t is the result of complex events of genetic admixture and cultural contact between early inhabitants

38 ents in southern African populations reveals admixture and cultural reversion involving several Khoes

39 Admixture and demographic growth happened recently, sugg

40 n GTEx (v8) with a high degree of population admixture and estimate genome-wide local ancestry.

41 lations demonstrates extensive interspecific admixture and hybridization, and documents the origin of

42 The analysis suggests a complex history of admixture and identifies signals of repeated evolutionar

43 ifferentiation of early modern humans, human admixture and migration events, and relationships among

44 endants of such slaves, yet their history of admixture and natural selection remains largely undefine

45 However, admixture and pathway analyses suggested some of these d

46 In this report we examine admixture and principal component analyses on these 81 w

47 We observed complex patterns of ancestral admixture and putative-damaging and novel variation, bot

48 rica-wide phylogeny that features widespread admixture and three prominent radiations, including one

49 data can be used to learn about ancestry and admixture and to correct errors in the colony records.

50 Both scenarios agree that admixture and/or divergence prior to the onset of the la

51 h India germplasms and demonstrating allelic admixture, and indigenous varieties from Southeast Asia

52 population size changes, population splits, admixture, and migration.

53 Principal Component, ADMIXTURE, and neighbor joining analyses of the nuclear

54 of ancestral populations, generations since admixture, and population structure of the sample; as a

55 , allowing us to address questions regarding admixture, and the numbers and identities of the parenta

56 ltaneous estimation of parameters describing admixture, and the sizes and separation times of ancestr

57 on of somatic aberrations, varying cell type admixtures, and different tissues of origin.

58 ture of the crown barbs, resulting from past admixture appears to have rendered a duller structural c

59 plex demographic models that consider recent admixture as well as archaic introgression.

60 e continuous nature of the produced in-house admixtures as data series instead of discrete points.

61 dent evidence of positive selection prior to admixture, based on extended haplotype homozygosity in A

62 data, IBDrecomb obtains higher accuracy than admixture-based estimation of recombination rates.

63 dividuals), and we compare them to LD-based, admixture-based, and family-based maps.

64 nturies of migration, isolation, growth, and admixture between ancestors of global origins.

65 herers (WHGs) to varying extents, reflecting admixture between ENFs and WHGs.

66 enomes for each, demonstrating an absence of admixture between lineages and that populations over ext

67 use the Mexican population resulted from the admixture between mainly Native American and European po

68 results support a multiphase model in which admixture between northeastern African-related peoples a

69 lotetraploid lager strains were derived from admixture between populations closely related to Europea

70 Admixture between racial/ethnic groups creates long-rang

71 We further detect strong evidence of admixture between the circum-basmati and circum-aus grou

72 data to study range-wide patterns of genetic admixture between the serpentine-soil specialist leather

73 eir current area of sympatry, and widespread admixture between the two lineages of Q. chrysolepis in

74 l and Denisovan fossils provide evidence for admixture between these two populations(3).

75 In addition, we uncovered admixtures between Siberians and Eastern European hunter

76 ints to cultural exchange, and thus possible admixture, between hunter-gatherers and farmers.

77 t wavefunction control uses a two-eigenstate admixture, but more control over the spatial distributio

78 ped a method, iMAAPs, to infer multiple-wave admixture by fitting ALD using a p-spectrum.

79 We hypothesize that admixture can enable rapid adaptive evolution in human p

80 ectly, although sample sizes and times since admixture can influence the results.

81 opulation substructure and relatively recent admixture can make differentiation difficult in heteroge

82 We provide experimental evidence for how admixture can modulate virulence and metabolism.

83 t representative of the diverse ancestry and admixture characterizing human populations.

84 pulations are structured into three distinct admixture clines stretching between various western and

85 roach permitted rapid evaluation of over 400 admixture combinations for the oxidative methyl esterifi

86 Further, African genetic admixture correlates with an index tabulating idiolectal

87 bination of past taurine and recent indicine admixture-derived genetic resources is at the root of th

88 ng, we found that a simple model of a single admixture did not fit the empirical data, and instead fa

89 en authentic durum wheat and its adulterated admixture down to 3% adulteration level, which is the ma

90 over the presence of cranberries in prepared admixtures down to 1% (w/w).

91 pulations, we find no evidence of sex-biased admixture during the migration that spread farming acros

92 lation dynamics through time, from extensive admixture during the Neolithic period to long-distance m

93 oral dynamics of population interactions and admixture during the Neolithic period.

94 ses could be reliably applied to unravel the admixture dynamics in European wildcats, as well as in o

95 e origins of the enslaved Africans and their admixture dynamics remain unclear.

96 The two programs differ in that ADMIXTURE employs a maximum-likelihood framework whereas

97 and adaptive immune system show evidence of admixture-enabled polygenic selection in Latin American

98 ility locus on chromosome 6, consistent with admixture-enabled selection for enhanced adaptive immune

99 Our screen for admixture-enabled selection relies on the identification

100 hese include distinguishing between a single admixture event and multiple Neanderthal contributions t

101 show that the Makranis are the result of an admixture event between local Baluch tribes and Bantu-sp

102 ence began ~30,000 ya, with evidence for one admixture event between migrant and resident continent b

103 e identify a major taurine x indicine cattle admixture event dated to circa 750-1,050 yr ago, which h

104 we do find evidence for at least one archaic admixture event in sub-Saharan Africa, with the stronges

105 inferred admixture events (e.g., an ancient admixture event in the Kalash).

106 0-11%) in modern-day Iberians, related to an admixture event involving European-like and north-west A

107 DyStruct is able to capture a well-supported admixture event of steppe ancestry into modern Europe.

108 hese segments derive from the same Denisovan admixture event(s) that contributed to present-day mainl

109 ect, we corroborate many previously inferred admixture events (e.g., an ancient admixture event in th

110 describe the history of past divergence and admixture events among any number of populations.

111 from Anatolian farmers, suggesting multiple admixture events between hunter-gatherers and farmers.

112 Thus, in the past 4,000 years, three limited admixture events detectably impacted the population, com

113 reconstruction of speciation, migration and admixture events for extinct taxa(1).

114 eographic boundaries and present evidence of admixture events into Ireland.

115 as a typical Iron Age population without the admixture events that later affected the rest of Iberia.

116 We additionally detect admixture events that provide evidence of Norse-Viking g

117 ferring ancestry segments and characterizing admixture events, which involve an arbitrary number of g

118 her with control coupons that had no nitrite admixture, for 18 months.

119 both parents of an individual have the same admixture fraction.

120 Here we search for evidence of archaic admixture from a worldwide panel of 1,667 individuals us

121 We also show that admixture from aus and indica is more recent than gene f

122 an migrants who received a limited amount of admixture from resident hunter-gatherers.

123 ns, who have witnessed a more recent wave of admixture from the Near East.

124 across the genome using arbitrarily complex admixture graphs, which are typically used to describe t

125 Admixture has played a prominent role in shaping pattern

126 est that Cape Verdean genetic and linguistic admixture have followed parallel evolutionary trajectori

127 erican ancestry as a result of their complex admixture histories.

128 ovide the first genetic analysis of wolf-dog admixture in an area entirely recolonized, the northwest

129 rican origin of Kriolu, we find that genetic admixture in Cape Verde varies on an axis separating Ibe

130 groups of mango varieties, discovers allelic admixture in commercial varieties, and shows distinct ge

131 tive correlation between the calcium nitrite admixture in concrete and the abundance of sulfide-oxidi

132 that this novel use of calcium nitrite as an admixture in concrete is a promising strategy to mitigat

133 ADMIXTURE analysis determined signatures of admixture in Cx. p.

134 hina formed distinct clades, and some showed admixture in genomes.

135 re, considered together with the ubiquity of admixture in human evolution, suggest that admixture ser

136 Our current understanding of archaic admixture in humans relies on statistical methods with l

137 OAL; n = 306) and the Genes-environments and Admixture in Latino Americans (GALA II) study (n = 573).

138 ted individuals from the Genomic Origins and Admixture in Latinos dataset (GOAL, n = 160), we designe

139 al variation that has since been obscured by admixture in modern populations.

140 yptians, who received additional sub-Saharan admixture in more recent times.

141 of the demographic history of migrations and admixture in Northern Eurasia.

142 entify novel events such as complex four-way admixture in San-Khomani individuals, and show that East

143 rom ancient human remains, we also highlight admixture in the ancestors of Iranian Zoroastrians dated

144 We find no evidence for archaic admixture in the Andaman Islands, as previously claimed,

145 Finally, we showed that possible lineage admixture in the introduced range can confound allocatio

146 ighland groups and a lack of non-New Guinean admixture in the latter.

147 US policy to address the general problem of admixture in the management of endangered species, subsp

148 dy-to-use kit for rapid detection of porcine admixtures in processed meat products.

149 population of two sub-populations plus some admixtures in the 672 accessions.

150 irms the existence of these nano-scale phase admixtures in the superconducting samples.

151 NPL is robust to population substructure and admixture, inclusion of nonpathogenic variants, as well

152 econd, we tested the hypothesis that genetic admixture increases with different sources of environmen

153 isturbance hypothesis, we found that genetic admixture increases with wildfire frequency, but we did

154 Population admixture is an important subject in population genetics

155 pomene is high but broadly heterogenous, and admixture is reduced at the preference-optix color patte

156 allowed us to investigate genetic ancestry, admixture, kinship and mobility.

157 ian and gene-search tools to better evaluate admixture levels between domestic and wild cats collecte

158 mportant challenge with methods based on the admixture linkage disequilibrium (ALD) is to remove the

159 Our admixture mapping analysis identified a genomic region (

160 Admixture mapping analysis of 12,212 Hispanic Community

161 Admixture mapping analysis of the primary OSA traits ide

162 These signals contributed to the admixture mapping associations and were replicated in in

163 erefore expand the range of studies in which admixture mapping is a viable tool.

164 ed ancestry of 3902 Latinos and performed an admixture mapping meta-analysis for asthma susceptibilit

165 SA and improve statistical power, we applied admixture mapping on three primary OSA traits [the apnea

166 We identified a genome-wide significant admixture mapping peak at 18q21 in Latinos (P = 6.8 x 10

167 The admixture mapping signal identified on chromosome 2, spa

168 lysis, rs116907128 accounted for most of the admixture mapping signal observed in the region.

169 Importantly, we note that the appropriate admixture mapping significance threshold depends on the

170 quency-based informative features to conduct admixture mapping studies from mixed samples of multiple

171 Admixture mapping studies have become more common in rec

172 esholds of 2.1 x 10(-5) and 4.5 x 10(-6) for admixture mapping studies in the African American and Hi

173 s remain about appropriate implementation of admixture mapping studies, including how best to control

174 ning genome-wide significance thresholds for admixture mapping studies.

175 gestation, whereas a genome-wide linkage and admixture mapping study highlighted PAX8 as a candidate

176 In this first admixture mapping study of OSA, novel associations with

177 terize the correlation of local ancestry and admixture mapping test statistics in admixed populations

178 information content for ancestry inference, admixture mapping, forensic applications, and detecting

179 We performed admixture mapping, genome-wide association analysis (GWA

180 captured by alternative approaches, such as admixture mapping.

181 d from the island (n = 836).Methods: We used admixture-mapping and whole-genome sequencing data to di

182 Another admixture-mapping peak was observed on chromosome 5q35.1

183 In contrast to genome-wide admixture, mitochondrial DNA stasis supports that this i

184 ized weighted LD statistic under the two-way admixture model and proposed a polynomial spectrum (p-sp

185 We use a mechanistic admixture model to compare the sex-specifically-inherite

186 ated the performance of iMAAPs under various admixture models in simulated data and applied iMAAPs to

187 Existing admixture network inference approaches work with single

188 In this article, we develop a new admixture network inference method called GTmix.

189 c history with admixture under the so-called admixture network model from population genetic data is

190 escent-based maximum likelihood inference of admixture networks with inferred local genealogies based

191 ions show that GTmix can infer more accurate admixture networks with much smaller data than existing

192 te this trend cannot be explained by African admixture nor Neanderthal introgression, since introgres

193 has contributed to low levels of Amerindian admixture observed in European Americans and that this p

194 es that the large amount of pulmonary venous admixture observed in patients with early COVID-19 can b

195 f Si:P orbitals using multiple orbital state admixtures, observing beat patterns produced by Zeeman s

196 linkage-disequilibrium decay patterns, that admixture occurred 6,600-3,550 years ago, coinciding wit

197 We find that frequent genetic admixture occurred among the different wild Pistacia spe

198 ultiple waves of migration followed by local admixture occurred in the last two centuries, the impact

199 Maximum interactions for the protein-pectin admixtures occurred between pH 3.70 and 3.85.

200 es traditional management regimes given that admixture occurs between an adaptively distinct ecotype

201 Admixture occurs when previously isolated populations co

202 epigenetic information, likely reflecting an admixture of cells with diverging cellular identities.

203 hat the SP-fraction contained MelSCs with an admixture of differentiated melanocytes.

204 ase overall genetic diversity and population admixture of dispersal limited coral reef species, poten

205 e one, except for functionals with very high admixture of Fock exchange (50%, BHLYP).

206 owever, spinels are prone to formation of an admixture of inverse and normal spinel lattices when the

207 o chimeric mammary tumor model comprising an admixture of low-Myc- and reversibly switchable high-Myc

208 antibody responses than those induced by an admixture of nanoparticles encompassing the same set of

209 combination has resulted in extensive genome admixture of nine baboon Lak phage populations.

210 sts in both groups were then infused with an admixture of paclitaxel and gemcitabine.

211 s that the extra peak is associated with the admixture of PI and PII on the nanometer scale.

212 c) up to 25 K emerges in the samples with an admixture of PI and PII phases.

213 test the hypothesis that the Native American admixture of the current Rapa Nui population predates th

214 resent-day Iranians and we estimate that the admixture of the Parsis with Indian populations occurred

215 ybrid-speciation event involving the genetic admixture of the snow-capped (Lepidothrix nattereri) and

216 the golden-crowned manakin is genetically an admixture of these species and does not represent a hybr

217 We developed a whey protein admixture of turmeric extract by spray drying (TWPC-SD)

218 ent ATP-binding events was well fitted as an admixture of two subpopulations with time constants of 2

219 This leads to a well-controllable admixture of various matter components in three hybrid p

220 Sequence recovery was precise and admixtures of as low as 1% could be identified, dependin

221 w altering extracellular fluid tonicity with admixtures of clinical IVFs affects sRBC biomechanical p

222 y the screening of simple binary and ternary admixtures of Pd/charcoal in combination with one or two

223 We investigate the effects of small admixtures of protic solvent molecules, such as water an

224 ease and describe the impact of ancestry and admixture on gene expression, eQTLs, and GWAS colocaliza

225 iaspora and illustrates the impact of recent admixture on the diffusion of adaptive traits across hum

226 To infer the histories of population admixture, one important challenge with methods based on

227 In these admixtures, one mtDNA type is often observed to prolifer

228 e scenarios but fails to tease apart whether admixture or divergence produced the two weak clusters.

229 RV-GDT to adequately control for population admixture or substructure and analyze pedigrees with mis

230 are robust to confounding due to population admixture or substructure.

231 Mineral/chemical admixtures or fibers provide better improvements in the

232 'grade of membership' model (also known as 'admixture' or 'topic' model) in which each sample has an

233 but little is known about genomic levels of admixture, or about the adaptive significance of introgr

234 rom bovine ancestors after nearly continuous admixture over at least the last 1,500 years.

235 ctural variants and a possible heterogeneous admixture pattern of North American and Asian ancestry.

236 rthermore, we find evidence for sex-specific admixture patterns, resulting from predominantly Europea

237 e-wide SNP dataset together with analysis of admixture, population structure, and coalescent modeling

238 affected (1) the genetic structure, (2) the admixture profile, (3) the demographic history, and (4)

239 Genetic admixture propels invasions of Callosobruchus maculatus

240 tional insights were provided by considering admixture proportions and functional categories of genes

241 s produces evidence that variation in genome admixture proportions explains most of the phenotypic va

242 . a type of decomposition of an individual's admixture proportions into further subsets of ancestral

243 Inference of admixture proportions is a classical statistical problem

244 ows us to perform probabilistic inference of admixture proportions of ancestors only using the genome

245 s in a genome contains information about the admixture proportions of the ancestors of an individual.

246 om a single individual, as a function of the admixture proportions of the ancestors of this individua

247 kov Model (HMM) framework for estimating the admixture proportions of the immediate ancestors of an i

248 ify the error in the estimation of ancestral admixture proportions under various conditions.

249 By quantifying recombination rate and admixture proportions, we then show that rates of introg

250 ssive hybridization is supported by tests of admixture, reduced subdivision between North African dat

251 ariance explained by ancestry by using local admixture relatedness between individuals.

252 Genome imputation, admixture resolution and genome-wide association analyse

253 Admixture resulting from natural dispersal processes can

254 ill not only condense output from replicated ADMIXTURE runs, but also infer from these data the optim

255 lso visualize the variation among individual ADMIXTURE runs, so as to facilitate selection of the mos

256 resent study, we demonstrate the utility of "admixture screening" for the discovery of new multicompo

257 astrians dated to 570 BCE-746 CE, older than admixture seen in any other sampled Iranian group, consi

258 Finally, we searched for signatures of post-admixture selection at traits evolving under positive se

259 f admixture in human evolution, suggest that admixture serves as a fundamental mechanism that drives

260 resent genomic diversity, independent of the admixture, showing that a few centuries is sufficient to

261 replicated a previously reported AA-DHS CAC admixture signal (rs7492028, LOD score 2.8).

262 Admixture signals are found between neighbor populations

263 only 2 of them showing significant signs of admixture stemming from past interbreeding with dogs, fo

264 e, driven by MAML3 and CSDE1, and a cortical admixture subtype.

265 G. scandens showed more evidence of admixture than G. fortis Beaks of G. scandens became pro

266 India/Myanmar, having experienced extensive admixture that reshuffled the ancestral Tibeto-Burman ge

267 nfluences are distinct from the early farmer admixture that transformed the genetic landscape of cent

268 w the delineation of population structure in ADMIXTURE, then (b) parses the output for summarization

269 We leveraged this admixture to identify associations between urine albumin

270 s, polygenic adaptation, and selection since admixture-to the challenging rainforest environments.

271 this paper we show that the distribution of admixture tract lengths in a genome contains information

272 The locations of these putative archaic admixture tracts are weighted against functional regions

273 Based on a genealogical model for admixture tracts, we develop an efficient algorithm for

274 nferring population demographic history with admixture under the so-called admixture network model fr

275 Some low-level admixture was also observed for clade 5 genomes, but onl

276 ancestry across the island reveals that the admixture was sex biased and happened heterogeneously ac

277 of African ancestry (PAA), quantified using ADMIXTURE, was higher among self-reported AA (median: 87

278 of levels of different cell types in tumour admixtures, we demonstrate that APOBEC3B (A3B), the prim

279 Concrete coupons with calcium nitrite as an admixture were exposed in a sewer manhole, together with

280 ne' and 'Queen' exhibited ancient and recent admixture, while 'Singapore Spanish' supported a one-ste

281 n modern Europeans resulted from more recent admixture with a ghost population that lacked a Neandert

282 ce and high cost, it is liable to fraudulent admixture with allied plants "safflower and calendula".

283 olian farmers followed by varying degrees of admixture with autochthonous hunter-gatherers, and then

284 ed phylogeographic structure was affected by admixture with dogs, coyotes and golden jackals, stressi

285 t whose ancestors had undergone sex-specific admixture with early farmers with Anatolian ancestry.

286 24,800 years ago and experienced significant admixture with East Asians ~1,700 years ago, coinciding

287 imited genetic consequences since signals of admixture with Europeans are not significant in any Leba

288 producers while rejecting models of minimal admixture with foragers and of genetic differentiation b

289 dividuals buried in megaliths display (past) admixture with local hunter-gatherers, similar to that s

290 inental Neolithic farmers, but also variable admixture with local Mesolithic hunter-gatherers.

291 ptation of Bantu speakers was facilitated by admixture with local populations, particularly for the H

292 an populations provided evidence for Tibetan admixture with low-altitude East Asians and for Sherpa i

293 Additional admixture with northeastern and western African-related

294 CE), we observe spatially-varying signals of admixture with sources principally from the eastern and

295 We find evidence of differential admixture with this ancient population among modern indi

296 always clear; human-associated migration and admixture with wild populations have had a strong impact

297 Admixtures with excessive hypotonicity (sodium = 103 mEq

298 Admixtures with higher tonicities (sodium = 141 mEq/L) a

299 Admixtures with intermediate tonicities (sodium = 111-12

300 orizontal gene transfer result in population admixture within skin sites and dissemination of antibio