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1 residue was replaced with a homologous beta-amino acid residue.
2 or to peptides containing a cyclobutane beta-amino acid residue.
3 t, molecular unique assignment to individual amino acid residues.
4 ng and tolerates all of the 20 proteinogenic amino acid residues.
5 mutagenesis was used to exchange individual amino acid residues.
6 ganizer (ROR) to discover disease-associated amino acid residues.
7 Proteins are composed of alpha-amino acid residues.
8 nvolved in degrading oligopeptides with 4-12 amino acid residues.
9 compatible with the arrangement of catalytic amino acid residues.
10 icted to be damaging, and occur at conserved amino acid residues.
11 ate the topological importance of individual amino acid residues.
12 sine residues using structural properties of amino acid residues.
13 y limited to a peptide resolution of 5 to 20 amino acid residues.
14 ences of the two isozymes only differ at six amino acid residues.
15 hemical property and occurrence frequency of amino acid residues.
16 l and yet accounts for 90 of the toxin's 387 amino acid residues.
17 opterins, is stabilized by conserved anionic amino acid residues.
18 sites links receptor activation to specific amino acid residues.
19 to codons encoding evolutionarily conserved amino acid residues.
20 i.e., peptides 1 and 2), each composed of 10 amino acid residues.
21 heme oxidations must occur through mediating amino acid residues.
22 sequons containing and/or flanked by acidic amino acid residues.
23 further by assessing the role of individual amino acid residues.
24 twork of water molecules, chloride ions, and amino acid residues.
25 slational modifications (PTM) of Trp and Arg amino acid residues.
26 cluster without participation of protons or amino acid residues.
27 D(2)O increase the proton affinities of key amino acid residues.
28 O-methyloxymorphone) by targeting additional amino acid residues.
29 e random coil chemical shifts of the natural amino-acid residues.
30 r Trp and is tolerant to other, redox-active amino-acid residues.
31 umber of truncated PEX5 molecules comprising amino acid residues 1-197 than full-length PEX5 molecule
32 ragments or an N-terminal gelsolin fragment (amino acid residues 1-70) in the presence of TRAIL impai
33 urons, we developed a pff species labeled at amino acid residue 114 with the environmentally insensit
36 in a GTP-dependent manner and that the Robo1 amino acid residues 1394-1398 are required for this inte
37 es in the phosphodiester band (1081 cm(-1)), amino acid residue (~1396 cm(-1)), and C=O stretching ca
38 namely, Cdc42-T17N (via a single mutation of amino acid residue 17 from the N terminus from Thr to As
39 d specific epitope recognition for ZIKV NS1 (amino acid residues 17-34), which could be a potential s
40 amined a putative cell entry region of TcdB (amino acid residues 1753-1851) for short sequences that
43 inase K (PK), an N-terminal truncation up to amino acid residue 209 altered the conformation of the S
44 at the interaction region in BB0323 requires amino acid residues 22-200, suggesting that the binding
45 tly, the leucine-to-arginine substitution at amino acid residue 232 (L232R) of PTPN3, a frequent muta
48 s to baloxavir can be affected by changes at amino acid residue 38 in the polymerase acidic (PA) prot
52 ularly a glutamic-acid-to-lysine mutation at amino acid residue 627 (E627K) in the 627 domain of the
53 tion method, mutations at seven different M1 amino acids (residue 73, 94, 135, 136, or 138 or a doubl
54 ackbone change of a terminally blocked delta-amino acid residue, a dipeptide mimic, by replacing its
55 d mitochondrial proteins on serine/threonine amino acid residues, a process termed protein O-GlcNAcyl
56 contain a large number of positively charged amino acid residues, a striking example being conotoxins
58 physical chemical properties of clusters of amino acid residues along the IDP primary sequence, indi
59 attention has been given to the mutation of amino acid residues along the proton translocating D-cha
61 these diverse myomixer orthologs reveals key amino acid residues and a minimal fusogenic peptide moti
62 nvolves protein electrostatics between basic amino acid residues and acidic lipids such as phosphoino
63 -directed mutagenesis to substitute specific amino acid residues and computational analyses to elucid
64 n evolutionary relative of RAG), we identify amino acid residues and domains the acquisition or loss
65 val leaves the positions of all coordinating amino acid residues and most nearby water molecules larg
66 ment of alpha-helix propensities for d-alpha-amino acid residues and propensities of residues with no
67 s, and thus electrical charges, of all other amino acid residues and revealed intricate hydrogen-bond
69 gular prism-with the largest containing >700 amino-acid residues and measuring 11 nm in diameter.
70 stances of methylation can occur on a single amino acid residue, and the relative mass of the modific
71 in the pedigree, affected a highly conserved amino acid residue, and was predicted to be deleterious
72 helix propensities among proteinogenic alpha-amino acid residues, and quantitative comparison with pr
73 y activity, we propose that those C-terminal amino acid residues are a potentially targetable motif o
74 sults show that interactions between charged amino acid residues are important both to directly stabi
78 We recently confirmed that a small set of amino acid residues are largely responsible for driving
80 he chemical environment of >20% of the total amino acid residues, as revealed by their NMR chemical-s
81 , we examined the importance of the SagS key amino acid residues associated with biofilm formation (L
82 A transporter subfamily all contain an extra amino acid residue at or near a conserved glycine in tra
83 y and virulence, sequence information on the amino acid residue at P8 might be helpful to estimate th
84 ngs strongly support the hypothesis that the amino acid residue at position 163 of canine cellular pr
86 ghly conserved among all strains, except the amino acid residue at position 8 (P8) that shows a certa
88 A binding is a cluster of positively charged amino acid residues between the mRNA entry site and uS3
89 2 and basigin is stabilized through multiple amino acid residues, but Gly-171 and Leu-175 of P2 were
90 study of (*)OH oxidative modification of 13 amino acid residues by using (18)O isotopic labeling.
91 ariance (SCV) tolerance and set-points on an amino acid residue-by-residue basis in NPC1 to different
92 rP derivative) with a single homologous beta-amino acid residue can generate biased agonists that ind
93 wn that divergence of a very small number of amino acid residues can account for the cold temperature
95 tential aggregation prone regions (APRs) use amino acid residue composition and/or sequence pattern f
97 e the effects of mutating Lys-300 of NhaA to amino acid residues containing side chains of different
98 fied two stretches of functionally important amino acid residues containing two conserved histidines.
100 us with a mutated PIMMS2 allele reveals that amino acid residues corresponding to the putative subtil
101 e designed a systematic approach to identify amino acid residues crucial for the expression and stabi
102 domains and characterized by three conserved amino acid residues (Cys-1865, His-1955, and Asp-1975).
105 ical analysis of data from 11 proteins (6391 amino acid residues) digested with immobilized porcine p
106 ns with oxygen atoms from two sources, other amino acid residues (E321/E324), and membrane lipids, de
107 onstructed eight internal deletions of 40-60 amino acid residues each, spanning the amino-terminal ha
108 es HA and BMP2, which contained highly basic amino acid residues either at the N-terminus (BMP2) or C
109 nstrated that the phylogenetically conserved amino acid residue, F439, was critical for both transpor
111 l for SOD2 interactions, we substituted each amino acid residue for alanine or more conservative resi
112 lity of the nearby cysteine 67, an essential amino acid residue for the formation of HLA-B27 homodime
113 ues forming intersubunit salt bridges and 21 amino acid residues forming hydrogen bonds between the t
114 FXIII-A2 crystal structure, we identified 12 amino acid residues forming intersubunit salt bridges an
115 erogeneous glycans may be bound to different amino acid residues, forming multiple types of protein g
116 hore used and how it interacts with specific amino acid residues found within the opsin protein seque
118 e number of exopeptidases that cleave single amino acid residues from the N-terminus of peptide subst
119 magglutinin (HA) head domain involving three amino acid residues, glycine (G), serine (S), and glutam
120 lete L- to D-epimerization of its C-terminal amino acid residue (>=100:1) and hydrolytic product rele
121 bryos, but the functional role of individual amino acid residues has been unclear because of technica
125 ge is a point mutation in which another H2AX amino acid residue important in the DDR, tyrosine 142 (Y
128 modeling and mutational analysis identified amino acid residues important for the preference of ChCA
130 ene and the presence of a negatively charged amino acid residue in position 163 was readily identifie
132 alysis is observed upon changing the achiral amino acid residue in the catalyst (at the i+2 position)
134 intramolecular proton shuttle, and a charged amino acid residue in the Ig1 domain of the chaperone.
135 interaction is dependent on the penultimate amino acid residue in the W sequence, a conserved, phosp
136 entified mutation affects a highly conserved amino acid residue in the zinc finger domain of ZNHIT3.
138 em, we demonstrate that substitution of four amino acid residues in a bacterial lanosterol synthase e
139 d light on this issue, we exchanged selected amino acid residues in a highly conserved stretch within
141 ers describe the side-chain conformations of amino acid residues in a protein based on the rotational
142 ted mutagenesis on five envelope (E) protein amino acid residues in accordance with the attenuated TM
146 the effects of photolysis and the binding of amino acid residues in cytochrome c and neuroglobin.
148 tivity in vitro and in vivo To determine the amino acid residues in hsp70 that are critical for SOD2
149 ses indicate the importance of specific loop amino acid residues in mediating catalytic activity.
152 ino acid cysteine, one of the least abundant amino acid residues in proteins, whose unique chemical a
153 e first time the importance of these unusual amino acid residues in solving long-standing hemolysis i
156 ty profile elucidate the roles of individual amino acid residues in the binding of ATR inhibitors, of
157 x-ray crystallography studies identified key amino acid residues in the binding pocket present in hum
158 with neutralizing maternal IgG that targets amino acid residues in the C-terminal region of the V3 l
162 Here we demonstrate that substitutions of 3 amino acid residues in the framework of the TCR variable
163 t Glu(446) and Arg(447) cooperate with other amino acid residues in the GERAMT-binding site for prope
167 th more hydrophobic and strongly interacting amino acid residues in the middle of CDR3alpha and CDR3b
168 nds between the compound and the surrounding amino acid residues in the receptor ligand-binding pocke
169 f PeIA analogs were synthesized by replacing amino acid residues in the second disulfide loop with st
170 s identified, along with the identity of the amino acid residues in the virus-receptor interface.
171 ce variants of CDC42, differing only in nine amino acid residues in their very C-terminal regions, pl
173 ng of several proteins also requires the two amino-acid residues in the NS1 N-terminal RNA-binding do
174 expression of different regions of CteG (656 amino acid residues) in uninfected cells revealed that i
175 mar, i.e. the arrangement and frequencies of amino acid residues, in known antimicrobial peptide sequ
176 enzyme soybean lipoxygenase-1 substituted at amino acid residues inferred to impact substrate binding
178 sequences annotated to indicate whether the amino acid residue is located within a hinge-bending reg
180 ability to localize phosphosites to specific amino acid residues is crucial to translating phosphopro
181 oat protein recognition motif or its contact amino acid residues is deleterious for viral assembly.
183 ing site in the chaperone was conserved, the amino acid residue itself varied among different species
184 d CBP acetylate Mastermind-like 1 (Maml1) on amino acid residues K188 and K189 to recruit NACK to the
187 gion of this molecule was incorrect, and the amino acid residue K79 should not have been depicted in
190 the method with mass spectrometry allows for amino-acid-residue-level structural information, a highe
192 ide chains at the so-called P1 position, the amino acid residue located directly N-terminal to the sc
194 roteins and mutagenesis combined reveals two amino acid residues located in the S5 domain, Ser876 and
195 s and both the chlorin phytol chains and the amino acid residues <6 angstrom from the pigments' porph
196 titive reaction between MGO and nucleophilic amino acid residues (Lys, Arg and Cys) and naringenin in
200 y subsets of SSc revealed several associated amino acid residues, mostly in the peptide-binding groov
201 nding interaction is distributed across many amino acid residues; mutation of individual residues did
202 enthalpy of unfolding provides the number of amino acid residues nu participating in the unfolding re
203 ous mutation of complement factor H (cfh) at amino acid residue of 1206 (ie, cfh (W/R) ) alone remain
204 structure-function insight into a conserved amino acid residue of transportins in brain development
205 t of the internal degrees of freedom in each amino acid residue of VVD on its overall dynamics by app
206 ctrostatic charge-based permeability and key amino acid residues of CcmK2 functioning in mediating mo
208 teins of GLUT5 and GLUT7, here we identified amino acid residues of GLUT5 that define its substrate s
209 We show that RBBP4 binds to the N-terminal amino acid residues of PRDM3 and PRDM16, with a dissocia
210 study the dynamics of phosphorylation of key amino acid residues of synapsin I, which critically impa
211 ransfer the ADP-ribose moiety from NAD(+) to amino acid residues of target proteins, leading to mono-
213 , we also studied the importance of critical amino acid residues of the four paralogues on mitochondr
214 esigned to target and engage with particular amino acid residues of the galectin-8N extended carbohyd
217 Here, we demonstrate that the 9 C-terminal amino acid residues of TIMP-1 and the large extracellula
218 s spec-based fragment analysis confirmed key amino acid residues on ROCK that are phosphorylated by S
219 ement of alpha-amino acid residues with beta-amino acid residues on susceptibility to proteolysis and
221 *-) or QA(*-) The identification of specific amino acid residues oxidized by reactive oxygen species
222 n, c.567 G > A, affecting a highly conserved amino acid residue (p.Gly189Arg) of the MRM2 protein.
223 l the van der Waals interactions between key amino acid residues (Phe13, Ile31, Gly32, Gly33, Ser42,
225 te specificity is controlled by one specific amino acid residue positioned at the entrance to the cat
227 characterization in HEK293 cells to identify amino acid residues potentially relevant for both the ZI
229 uorescent spectroscopy, we demonstrated that amino acid residues predicted to participate in Fe(II)-b
231 s in premature termination of the protein 51 amino acid residues prior to the stop codon, and in conc
232 f alpha-tubulin at conserved lysine 40 (K40) amino acid residue regulates microtubule dynamics and co
233 ite-directed mutagenesis identified the core amino acid residues required for KEAP1-mediated degradat
234 ence of known human proteins sharing the key amino acid residues required for recognition by the TCR,
235 other proteins that requires these same two amino-acid residues required for NS1 RBD dsRNA-binding a
240 eolytic cleavage site of MuV F, because this amino acid residue shows a striking variability dependin
241 ighly reactive and footprint broadly several amino acid residue side chains on the time scale of subm
242 analytics software (Xenophile) to detect the amino acid residue sites of proteins that were covalentl
244 n this study, several BnaDGAT1 variants with amino acid residue substitutions in PTMD9 were character
245 rized the mechanisms by which these critical amino acid residue substitutions increased the misfoldin
246 ously revealed that one of the regions where amino acid residue substitutions lead to higher performa
247 gnment and further biochemical analysis, the amino acid residue substitutions that conferred increase
250 f the BnaDGAT1 variants were affected by the amino acid residue substitutions, and a new kinetic mode
252 of the pKa values of ion-coordinating acidic amino acid residues suggested that the face-specific pH
253 ailed catalytic mechanism and arrangement of amino acid residues surrounding the chromophore in this
254 This inhibition depends on the identities of amino acid residues surrounding the RF2-GGQ functional m
258 ftware called Xenophile, the identity of the amino acid residue that was adducted can be established,
259 g (beaver) SIRT6 protein and identified five amino acid residues that are fully responsible for their
260 nd to interact strongly with AE1 at specific amino acid residues that are linked to diseases and bloo
261 entity of a CRM, the protein target, and the amino acid residues that are modified to be rapidly esta
263 e delta-subunit that contains several acidic amino acid residues that confer proton-sensitivity and e
266 e non-conservative mutations in several ACE2 amino acid residues that disrupt key polar and charged c
267 xtant enzymes feature precise positioning of amino acid residues that facilitate multiple complex tra
268 otein (VP2) gene are nonsynonymous, altering amino acid residues that fall within, or adjacent to, th
272 nes, we were able to pinpoint three specific amino acid residues that may be driving the change in th
273 ied a combination of natural and non-natural amino-acid residues that was used to generate highly eff
274 egatively charged DNA and positively charged amino acid residues, the translocation speed of DNA can
275 nsive scanning mutagenesis by changing every amino acid residue to Val, Ala, or Gly, and then screeni
276 riterpenoid synthesis and reveals diagnostic amino acid residues to differentiate between sterol and
277 ge equilibria to measure the propensities of amino acid residues to participate in helical secondary
278 atalytic oligomer containing alpha- and beta-amino acid residues to template the ring-closing process
279 on contributions by tryptophan and tyrosine amino acid residues to the antioxidant capacity of SPH f
281 allele knock-in of the most commonly mutated amino acid residue, tyrosine 537, in the estrogen-respon
283 erived from OVA, in which at least one alpha-amino acid residue was replaced with a homologous beta-a
284 ol, an aryl olefin, an alpha substituent, or amino acid residues was carried out to generate the desi
287 cently, by precision mapping on all possible amino acid residues, we identified histone serine ADPr m
288 oviding a positive charge at the substituted amino acid residue, were associated with poor survival (
289 urs at all of these sites in each individual amino acid residue, which makes aliphatic peptide sequen
290 Our results illustrate how isomerization of amino acid residues, which may seem to be only a minor s
291 dechain hydrogen bonds, XSuLT annotates each amino acid residue with residue depth, chain and ligand
292 of broadly distributed replacement of alpha-amino acid residues with beta-amino acid residues on sus
293 ene (ESR1) mutations at the tyrosine (Y) 537 amino acid residue within the ligand binding domain on (
295 ense or small in-frame deletions that affect amino acid residues within or adjacent to the protein's
296 del was tested using targeted mutagenesis of amino acid residues within or adjacent to the putative i
297 the structure of apo-hGGT reveal movement of amino acid residues within the active site as the substr
298 ata, and targeted mutagenesis, we identified amino acid residues within the Spike-ACE2 interface, whi
299 investigated the contribution of individual amino acid residues within the TMD of Arabidopsis (Arabi
300 esis study was performed to demonstrate that amino acid residue Y265(7.36) was the unique anchor poin