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2 ccupies the ribosomal decoding center at the aminoacyl (A) site in a manner resembling that of the tR
3 ariety of three-nucleotide codons within the aminoacyl (A) site, but how these endonucleases achieve
5 ite nucleotides that monitor the mRNA in the aminoacyl(A) site adopt different orientations depending
7 is converted to EF-Tu.GDP, forms part of an aminoacyl(aa)-tRNA.EF-Tu.GTP ternary complex (TC) that a
11 ureus seryl-tRNA synthetases in complex with aminoacyl adenylate analogues and applied a structure-ba
12 nsfer editing, which hydrolyzes misactivated aminoacyl-adenylate intermediate via a nebulous mechanis
13 This selective rejection of a non-protein aminoacyl-adenylate is in addition to known kinetic disc
16 e can specifically detoxify non-hydrolyzable aminoacyl adenylates differing in their aminoacyl moieti
18 ognate tRNA, IleRS exhibits a 10-fold faster aminoacyl-AMP hydrolysis and a 10-fold drop in amino aci
19 tional accuracy despite differences in their aminoacyl attachments and anticodon nucleotide sequences
20 in food analysis, as well as non-proteolytic aminoacyl derivatives, which are well-known taste-active
23 selenylation products containing an adjacent aminoacyl group in a fast and efficient way, with high a
24 ed alanyl-PG then revealed hydrolysis of the aminoacyl linkage, resulting in the formation of alanine
25 ves an amide bond connecting the peptidyl or aminoacyl moieties of, respectively, intact and processe
28 bstrates reveals the tRNA acceptor stem, the aminoacyl moiety, and the polar head group of PG as the
29 and YhhY protect bacteria from various toxic aminoacyl nucleotides, either exogenous or those generat
33 ove sequentially on the ribosome from the A (aminoacyl) site to the P (peptidyl) site to the E (exit)
35 recently been reported that abnormalities in aminoacyl t-RNA synthetase (ARS) genes are linked to var
40 ains were progressively added to cytoplasmic aminoacyl transfer RNA (tRNA) synthetases during evoluti
41 an expanded translation machinery, including aminoacyl transfer RNA synthetases with specificities fo
42 Here, we perform simulations of large-scale aminoacyl-transfer RNA (aa-tRNA) rearrangements during a
43 hat these ribosomes exhibit perturbations in aminoacyl-transfer RNA (aa-tRNA) selection and altered p
46 r RNA synthetase (Ec ProRS), a member of the aminoacyl-transfer RNA synthetase family, has been inves
48 ring protein synthesis, the ribosome selects aminoacyl-transfer RNAs with anticodons matching the mes
49 ptide, a peptidoglycan precursor used by the aminoacyl-transferase FemXWv for synthesis of the bacter
50 consisting of elongation factor Tu (EF-Tu), aminoacyl tRNA and GTP, and locks the otherwise dynamica
52 by mTORC1-S6K1 induces its release from the aminoacyl tRNA multisynthetase complex, which is require
54 strate protein (zinc finger protein 746) and aminoacyl tRNA synthetase complex interacting multifunct
55 ide II (EMAP II), one component of the multi-aminoacyl tRNA synthetase complex, plays multiple roles
57 he amino acid and the generation of a mutant aminoacyl tRNA synthetase that can selectively charge th
58 d that mutations in a tRNA gene, aspT, in an aminoacyl tRNA synthetase, AspRS, and in a translation f
65 tion are also substrates, including multiple aminoacyl tRNA synthetases, ribosomal proteins, protein
66 GlyRS) provides a unique case among class II aminoacyl tRNA synthetases, with two clearly widespread
68 (EF-Tu) bound to GTP chaperones the entry of aminoacyl-tRNA (aa-tRNA) into actively translating ribos
72 erase center of the ribosome interferes with aminoacyl-tRNA accommodation, suggesting that during can
75 t which acts as an analogue of the 3'-end of aminoacyl-tRNA and terminates protein synthesis by accep
76 ctor-1A and its ternary complex with GTP and aminoacyl-tRNA are common targets for the evolution of c
77 fects were observed using the same, natural, aminoacyl-tRNA at the A site and all rates of accommodat
78 vent stable binding and accommodation of the aminoacyl-tRNA at the A-site, leading to inhibition of p
79 e presence of a properly delivered initiator aminoacyl-tRNA at the P site to the distant GTPase cente
83 m, glycine, serine and threonine metabolism, aminoacyl-tRNA biosynthesis and taurine and hypotaurine
84 l muscle and lung had significant changes in aminoacyl-tRNA biosynthesis, as analyzed by pathway anal
85 olyamine, lysine, tryptophan metabolism, and aminoacyl-tRNA biosynthesis; and in CSF involved cortiso
88 al proofreading underlies the inability of D-aminoacyl-tRNA deacylase (DTD) to discriminate between D
91 conditions, such as amino acid starvation or aminoacyl-tRNA depletion due to a high level of recombin
92 ecognition of a start codon by the initiator aminoacyl-tRNA determines the reading frame of messenger
93 steps in the accommodation process, wherein aminoacyl-tRNA enters the peptidyltransferase center of
96 e activity reduces the amount of the cognate aminoacyl-tRNA in a cell-free translation system resulti
97 otic binding should prevent the placement of aminoacyl-tRNA in the catalytic site, it is commonly ass
98 findings demonstrate an unexpected role for aminoacyl-tRNA in the formation of dehydroamino acids in
99 codon recognition by elongation factor-bound aminoacyl-tRNA is initiated by hydrogen bond interaction
100 S. pneumoniae depends in part upon MurM, an aminoacyl-tRNA ligase that attaches L-serine or L-alanin
101 SILAC experiments conducted in culture, the aminoacyl-tRNA precursor pool is near completely labeled
102 ent within intracellular free amino acid and aminoacyl-tRNA precursor pools in dividing and division-
107 racycline interfere with tRNA binding to the aminoacyl-tRNA site on the small 30S ribosomal subunit.
108 hydrophobic lipid substrate PG and the polar aminoacyl-tRNA substrate to access the catalytic site fr
111 s problem by fast kinetics using full-length aminoacyl-tRNA substrates with atomic substitutions that
119 l assays, we sought to determine whether any aminoacyl-tRNA synthetase (aaRS) utilizes BMAA as a subs
120 ondria of Saccharomyces cerevisiae, a single aminoacyl-tRNA synthetase (aaRS), MST1, aminoacylates tw
121 s into proteins is the scalable discovery of aminoacyl-tRNA synthetase (aaRS)-tRNA pairs that are ort
123 hrough metadynamics simulations on a class I aminoacyl-tRNA synthetase (aaRSs), the largest group in
125 to amino acid (AA) limitation of the entire aminoacyl-tRNA synthetase (ARS) gene family revealed tha
127 tantial evidence implicating the multienzyme aminoacyl-tRNA synthetase (mARS) complex and its AIMp1 s
129 sed as a sense codon, and an orthogonal tRNA/aminoacyl-tRNA synthetase (RS) pair is used to generate
130 in living cells relies on an engineered tRNA/aminoacyl-tRNA synthetase (tRNA/aaRS) pair, orthogonal t
131 ibits aminoacylation, a unique example of an aminoacyl-tRNA synthetase being inhibited by a toxin enc
134 3 to form a stable and conserved large multi-aminoacyl-tRNA synthetase complex (MARS), whose molecula
135 sequestered in a high-molecular-weight multi-aminoacyl-tRNA synthetase complex (MSC), restricting the
137 sgenic overexpression of a parkin substrate, aminoacyl-tRNA synthetase complex interacting multifunct
138 The long form is a component of the multiple aminoacyl-tRNA synthetase complex, and the other is an N
139 ar proteins, in the case of a heterotrimeric aminoacyl-tRNA synthetase complex, the aggregated protei
141 a GlnRS and provides a paradigm for studying aminoacyl-tRNA synthetase evolution using directed engin
142 ded expression of amino acid transporter and aminoacyl-tRNA synthetase genes downstream of the stress
143 ysyl-tRNA synthetase (PylRS), a polyspecific aminoacyl-tRNA synthetase in wide use, has facilitated i
144 along with the identification of its cognate aminoacyl-tRNA synthetase makes it possible to map trans
147 roduced a Methanocaldococcus jannaschii tRNA:aminoacyl-tRNA synthetase pair into the chromosome of a
148 Using E. coli cells with a special tRNA/aminoacyl-tRNA synthetase pair, two PPARalpha variants w
151 Isoleucyl-tRNA synthetase (IleRS) is an aminoacyl-tRNA synthetase whose essential function is to
152 r 2 receptor alpha-subunit), MARS (methionyl aminoacyl-tRNA synthetase), FARSB (phenylalanine-tRNA sy
153 aspects of tRNA recognition from the parent aminoacyl-tRNA synthetase, relaxed tRNA specificity lead
155 be a rapid approach for directly discovering aminoacyl-tRNA synthetase-tRNA pairs that selectively in
156 nd enables the direct, scalable discovery of aminoacyl-tRNA synthetase-tRNA pairs with mutually ortho
158 ves modifying cells to express an orthogonal aminoacyl-tRNA synthetase/tRNA pair to enable the incorp
160 ) by introducing orthogonal amber suppressor aminoacyl-tRNA synthetase/tRNA pairs into a thiocillin p
161 It relies on mutually orthogonal engineered aminoacyl-tRNA synthetase/tRNA pairs that suppress diffe
163 alian cells was achieved using an orthogonal aminoacyl-tRNA synthetase/tRNA(CUA) pair (CpKRS/MbtRNA(C
165 on 166 using an evolved orthogonal nitro-Tyr-aminoacyl-tRNA synthetase/tRNACUA pair for functional st
169 of the genetic code is maintained in part by aminoacyl-tRNA synthetases (aaRS) proofreading mechanism
171 us enzyme) derived from Class I and Class II aminoacyl-tRNA synthetases (aaRSs) acylate tRNA far fast
172 nate amino acid:transfer RNA (tRNA) pairs by aminoacyl-tRNA synthetases (aaRSs) and inaccurate select
179 in pairing tRNAs with correct amino acids by aminoacyl-tRNA synthetases (aaRSs) dictates the fidelity
184 ytoplasmic and potentially all mitochondrial aminoacyl-tRNA synthetases (aaRSs) were identified, and
185 curring can result from mechanisms involving aminoacyl-tRNA synthetases (aaRSs) with inactivated hydr
187 major factors involved in this exclusion are aminoacyl-tRNA synthetases (aaRSs), elongation factor th
200 A primer selection is facilitated by cognate aminoacyl-tRNA synthetases (ARSs), which bind tRNAs and
201 nds on a cytosolic complex (AME) made of two aminoacyl-tRNA synthetases (cERS and cMRS) attached to a
205 However, when CP1 domains from different aminoacyl-tRNA synthetases and origins were fused to thi
206 -box riboswitches regulate the expression of aminoacyl-tRNA synthetases and other proteins in respons
207 WHEP domains exist in certain eukaryotic aminoacyl-tRNA synthetases and play roles in tRNA or pro
210 lasmids enables the bulk purification of the aminoacyl-tRNA synthetases and translation factors neces
222 Strains releasing asynchronously the two aminoacyl-tRNA synthetases display aberrant expression o
226 cause of this important biological function, aminoacyl-tRNA synthetases have been the focus of anti-i
228 cyl-tRNA synthetase (IleRS) is unusual among aminoacyl-tRNA synthetases in having a tRNA-dependent pr
229 m for understanding the role of mutations in aminoacyl-tRNA synthetases in neurological diseases.
230 is predominately dictated by the accuracy of aminoacyl-tRNA synthetases in pairing amino acids with c
232 ent sporulation and suggests that editing by aminoacyl-tRNA synthetases may be important for survival
236 rchers in the scientific community requested aminoacyl-tRNA synthetases to be targeted in the Seattle
237 les that transfer activated amino acids from aminoacyl-tRNA synthetases to the ribosome, where they a
239 In this study, we identified two class-I aminoacyl-tRNA synthetases with high similarities to con
240 ns such as the ribosome, or proteins such as aminoacyl-tRNA synthetases, but is unprecedented for a c
241 YajL substrates included ribosomal proteins, aminoacyl-tRNA synthetases, chaperones, catalases, perox
242 of tRNAs with their cognate amino acids, by aminoacyl-tRNA synthetases, establishes the genetic code
244 cted dual-localized proteins, including many aminoacyl-tRNA synthetases, in which a leaky AUG start c
245 translation system components, in particular aminoacyl-tRNA synthetases, shows that, at a stage of ev
246 F-P by PoxA evolved from tRNA recognition by aminoacyl-tRNA synthetases, we compared the roles of EF-
247 from a common ancestor related to glutaminyl aminoacyl-tRNA synthetases, which may have been one of t
248 o acids and deacylated tRNAs is catalyzed by aminoacyl-tRNA synthetases, which use quality control pa
254 accurately decode mRNA by proofreading each aminoacyl-tRNA that is delivered by the elongation facto
256 ies: while TET sterically hinders binding of aminoacyl-tRNA to the ribosome, NEG stabilizes its bindi
257 d by the TEF1 and TEF2 genes in yeast) is an aminoacyl-tRNA transferase needed during protein transla
258 diated by the base pairing of a near-cognate aminoacyl-tRNA with a PTC and subsequently, the amino ac
260 ngation factor-1A ternary complex (eEF1A.GTP.aminoacyl-tRNA) as a specific target and demonstrate com
263 Using a simple method to prepare homogeneous aminoacyl-tRNA, we show that the Bacillus subtilis glyQS
264 g the ribosomal A site for the next incoming aminoacyl-tRNA, while precisely maintaining the translat
265 and near-cognate tRNA anticodons explore the aminoacyl-tRNA-binding site (A site) of an open 30S subu
267 y the description of an increasing number of aminoacyl-tRNA-dependent enzymes involved in secondary m
268 This review describes the three groups of aminoacyl-tRNA-dependent enzymes involved in the synthes
274 tions between translation elongation rates, (aminoacyl-) tRNA levels, and codon usage in mammals.
275 ing intermediates of translation elongation (aminoacyl-tRNAeEF1A), termination (eRF1eRF3), and riboso
277 ryotic elongation factor 1A (eEF1A) delivers aminoacyl tRNAs to the A-site of the translating 80S rib
280 ) are enzymes that transfer amino acids from aminoacyl-tRNAs (aa-tRNAs) to phosphatidylglycerol (PG)
281 zes proteins using exclusively L- or achiral aminoacyl-tRNAs (aa-tRNAs), despite the presence of D-am
282 anslation elongation to accommodate incoming aminoacyl-tRNAs and translocate along the mRNA template.
286 omes decode mRNA codons by selecting cognate aminoacyl-tRNAs delivered by elongation factor Tu (EF-Tu
289 mponents to study initial codon selection of aminoacyl-tRNAs in ternary complex with elongation facto
292 EF-Tu), a translational GTPase that delivers aminoacyl-tRNAs to the ribosome, plays a crucial role in
295 ontrol mechanism, the editing of misacylated aminoacyl-tRNAs, provides a critical checkpoint both for