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1 ted with RNA and thioester cofactor-mediated aminoacylation.
2 ate amino acids that are misactivated during aminoacylation.
3 et trimmed before addition of the 3'-CCA and aminoacylation.
4 inct active site structures to catalyze tRNA aminoacylation.
5 zing the bound charging amino acid following aminoacylation.
6 ction, requires accurate transfer RNA (tRNA) aminoacylation.
7 had the same two complementary modes of tRNA aminoacylation.
8 , which is distinct from the active site for aminoacylation.
9 hmtRNA(Met), which significantly reduces its aminoacylation.
10 tion and is intrinsic to the active site for aminoacylation.
11 nd regulation molecules for functions beyond aminoacylation.
12 the same structural determinants as used for aminoacylation.
13 and is directly responsible for proper tRNA aminoacylation.
14 (m1)G37 in the anticodon loop for efficient aminoacylation.
15 rved overall accuracy of DNA replication and aminoacylation.
16 rid system and to measure in vitro tRNA(Pyl) aminoacylation.
17 by most leucyl-tRNA synthetases (LeuRS) for aminoacylation.
18 n can sequester free, uncharged tRNAs during aminoacylation.
19 mechanisms ensuring the selectivity of tRNA aminoacylation.
20 RNA during amino acid activation and/or tRNA aminoacylation.
21 r thermautotrophicus that enhances tRNA(Pro) aminoacylation.
22 eptide is not important for the kcat of tRNA aminoacylation.
23 xisting tRNA(Val(AAC)) accompanied by its de-aminoacylation.
24 id recognition but less efficient in cognate aminoacylation.
25 re delayed relative to the loss of G(-1) and aminoacylation.
26 A at their 3'-ends, representing the site of aminoacylation.
27 is highly sensitive to the kinetics of tRNA aminoacylation.
28 to facilitate high-affinity tRNA binding and aminoacylation.
29 tase (aaRS) utilizes BMAA as a substrate for aminoacylation.
30 to tyrosine, and significantly reduces tRNA aminoacylation.
31 near the active center of GltX and inhibits aminoacylation, a unique example of an aminoacyl-tRNA sy
32 LeuRS) is a class I enzyme, which houses its aminoacylation active site in a canonical core that is d
33 site is located approximately 30 A from the aminoacylation active site in the canonical core of the
35 o MST1 induces conformational changes in the aminoacylation active site, and it positions a potential
39 tion of dimeric T1 into monomers deprived of aminoacylation activity and simultaneous induction of T2
40 ants S57C and N280S both displayed wild-type aminoacylation activity and stability with respect to th
41 ses TyrRS(Mini), which not only has the same aminoacylation activity as native TyrRS but also has str
42 207A) remained cytosolic and maintained full aminoacylation activity but failed to rescue infectivity
45 owever, previous studies showed that loss of aminoacylation activity is not required to cause CMT.
49 ltered highly conserved amino acids, and the aminoacylation activity of QARS was significantly impair
52 gative effect of the p.His257Arg mutation on aminoacylation activity of TrpRS, which subsequently com
53 east mitochondrial LeuRS has compromised its aminoacylation activity to some extent and adapted its C
56 y is rooted in an ancient adaptation for its aminoacylation activity, these results suggest that the
60 cRNAs could implement all the steps for auto-aminoacylation: amino acid coordination, intermediate ac
61 yzing aminoacyl-adenylate formation and tRNA aminoacylation and a second editing or proofreading site
62 These results suggest a regulatory role for aminoacylation and abortion during stress, and our study
64 ic C-terminal domain in tRNA recognition for aminoacylation and amino acid editing has adapted differ
68 minal domain as LeuRS transitions between an aminoacylation and editing complex or, in the case of ye
70 he function of independent but collaborative aminoacylation and editing domains of alanyl-tRNA synthe
74 TP is utilized in protein synthesis via tRNA aminoacylation and guanosine triphosphate regeneration.
77 two sites: one for amino acid activation and aminoacylation and one for editing misactivated amino ac
78 ion so that, remarkably, two motifs (one for aminoacylation and one for editing) in the same enzyme i
79 ssignment of protein domains associated with aminoacylation and phosphate binding, the HisZ-HisG octa
81 platform for the synthesis by enzymatic tRNA aminoacylation and ribosomal translation of cyclic pepti
82 e A3243G mutation improved the efficiency of aminoacylation and stability of mitochondrial tRNAs and
83 e significant decreases in the efficiency of aminoacylation and steady-state level of mt-tRNA(Asp) in
84 lting from the historical study of tRNA(Cys) aminoacylation and the integrative perspective of sequen
85 tion domains had catalytic functions for the aminoacylation and the molecular switch-driven transport
88 ispairs are significantly more important for aminoacylation and translation than previously realized.
94 for amino acid, ATP and tRNA associated with aminoacylation, and a fourth 'orthogonal' subsite create
95 ia tyrosyl-tRNA synthetase (LdTyrRS) namely, aminoacylation, and as a mimic of host CXC chemokine.
96 two sites lead to rigorous accuracy in tRNA aminoacylation, and both activities are essential to Leu
97 taB2 showed comparable kinetics for in vitro aminoacylation, and both enzymes complemented a defect i
98 own is not attributable to altered tRNA(Gly) aminoacylation, and cannot be rescued by Drosophila Gars
99 ctive site titration, amino acid activation, aminoacylation, and posttransfer editing (deacylation).
101 structure and creates a better substrate for aminoacylation, and thus the UPD and TLS are functionall
105 lthough the nucleotides in tRNA required for aminoacylation are conserved in evolution, bacterial ami
107 functionally active in ATP-PPi exchange and aminoacylation assays, and showed similar Km for L-proli
108 ircular dichroism and NMR spectroscopies and aminoacylation assays, we have investigated the function
109 elopment of tRNA nucleotide determinants for aminoacylation being interdependent with those for ribos
110 evolution of amino acid specificity and tRNA aminoacylation, both essential for expanding the genetic
111 the leucine-specific domain is critical for aminoacylation but not required for editing activity.
112 ed with ATP, yet decreases the efficiency of aminoacylation by 10(3)-fold while significantly elevati
113 peptide reduces the catalytic efficiency of aminoacylation by a factor of 100 that largely results f
120 tRNA are important identity determinants for aminoacylation by cognate aminoacyl-tRNA synthetases.
123 an essential identity determinant for proper aminoacylation by isoleucyl tRNA synthetase (IleRS) and
126 structural requirements of the anticodon for aminoacylation by methionyl tRNA synthetase and IleRS.
130 on of tRNA(ala)(GAC) at a site that prevents aminoacylation by the dicot alanyl-tRNA synthetase, indi
132 th EF-1alpha, suggesting that the product of aminoacylation can be directly handed off to EF-1alpha f
133 he 2'-hydroxyl of A66, are also critical for aminoacylation catalytic efficiency by human ProRS.
134 ayed a refolding defect resulting in reduced aminoacylation compared to wild type after renaturation.
135 s within the RDW peptide are critical to the aminoacylation complex, but impacted amino acid editing
137 Here we identify a new pathway for lipid aminoacylation, conserved in many Actinobacteria, which
138 tRNA acceptor stem end between the canonical aminoacylation core and a separate domain called CP1 tha
139 ta-strands, which link the CP1 domain to the aminoacylation core of LeuRS, are required for editing o
140 ucts are translocated 30A from the canonical aminoacylation core to a hydrolytic editing-active site
141 n bacterial and mammalian systems, errors of aminoacylation could be mutagenic and lead to disease.
143 translational fidelity both by enhancing the aminoacylation efficiencies of the three aaRSs in the co
144 iant enzyme displayed significantly improved aminoacylation efficiency for the G34A mutant, suggestin
145 rminal fragment in trans did not improve the aminoacylation efficiency of the N-terminal fragment to
146 fluence amino acid binding, tRNA binding and aminoacylation efficiency, but they play no role in eith
147 ssociation in the MARS complex enhances tRNA-aminoacylation efficiency, which is in part dependent on
149 tions with the ribosome, with PoxA-catalyzed aminoacylation evolving later as a secondary mechanism t
151 -tRNA synthetase (hs mt LeuRS) achieves high aminoacylation fidelity without a functional editing act
153 The same selection also showed that RNA aminoacylation from adenylate is simpler than from CoA t
154 to improve the anticodon specificity of tRNA aminoacylation from bacteria to humans, possibly to acco
155 emoval of 3'-primer before reaction selected aminoacylation from PheAMP in three cycles, yielding act
159 many aaRS CMT mutants result in loss of tRNA aminoacylation function, animal genetics studies demonst
161 ants were pleiotropic, exhibiting defects in aminoacylation, global structure, and elongation-factor
163 It is hypothesized that KARS variants affect aminoacylation in inner-ear cells by interfering with bi
166 and L570 in E. coli LeuRS) strongly impacts aminoacylation in two ways: it affects both amino acid d
173 deacylated tRNA, which accumulates when tRNA aminoacylation is limited by lack of substrates or inhib
175 mechanism suggested by these data to promote aminoacylation is reminiscent of the NAD(+)-dependent me
176 etases (aaRSs), the rate-determining step in aminoacylation is the dissociation of charged tRNA from
177 The catalytic efficiency of steady-state aminoacylation (k(cat)/K(M)) with lysine by LysRS1 varia
178 stacking interactions with U34 and U35, and aminoacylation kinetics also identified direct interacti
181 te and noncognate reactions by ATP/PP(i) and aminoacylation kinetics strongly suggests that SepRS is
182 tain bacterial and eukaryotic tRNAs enhances aminoacylation kinetics, assists proper codon-anticodon
183 obal translation in this organism; that tRNA aminoacylation levels exert, at most, weak control over
184 gest codon dwell times could be explained by aminoacylation levels or high codon usage relative to tR
185 eins in response to fluctuating transfer RNA aminoacylation levels under various nutritional states.
186 nd LysRS2 do not drastically impact cellular aminoacylation levels, focusing attention on the mechani
188 84 traps the enzyme-tRNA complex in a novel 'aminoacylation-like' conformation, forming novel interac
190 talytic importance of the A76 2'-OH group in aminoacylation mirrors a similar role for this moiety th
191 splicing, as well as tRNA nuclear export and aminoacylation, occur efficiently when the SEN complex i
195 nsfer RNA synthetases through their accurate aminoacylation of cognate tRNAs and their ability to cor
196 x and by coupling two stages of translation: aminoacylation of cognate tRNAs and their subsequent cha
198 resistance to antimicrobial peptides through aminoacylation of lipopolysaccharide (LPS), expected to
199 nyl-S-PCP intermediate; (ii) we confirm that aminoacylation of LnmP by LnmQ in trans is the result of
205 expression of AtKRS in carrot cells promotes aminoacylation of such tRNAs in vivo and translational r
209 an be considered allosteric enzymes in which aminoacylation of the tRNA acceptor stem is enhanced upo
210 the unnatural base pair into mRNA and tRNA, aminoacylation of the tRNA with a non-canonical amino ac
213 This TLS not only acts like a tRNA to drive aminoacylation of the viral genomic (g)RNA, but also int
215 ombined accuracy of two basic processes: the aminoacylation of transfer RNAs with their cognate amino
217 ep in protein biosynthesis is the 2(')(3(')) aminoacylation of tRNA by aminoacyl-tRNA synthetases.
218 t t(6)A is a strong positive determinant for aminoacylation of tRNA by bacterial-type but not by euka
223 denylate, inhibits translation by preventing aminoacylation of tRNA(Asp) by aspartyl-tRNA synthetase
227 A(i)(Met) and other tRNA precursors, and the aminoacylation of tRNA(i)(Met) are also strongly impaire
228 yl-tRNA synthetase (hLysRS) is essential for aminoacylation of tRNA(Lys) Higher eukaryotic LysRSs pos
229 he RNA elements required for recognition and aminoacylation of tRNA(Pyl) in vivo by using the Pyl ana
232 y of tyrosyl-tRNA synthetase to catalyze the aminoacylation of tRNA(Tyr), we have expressed each of t
233 l domain of Escherichia coli LeuRS abolished aminoacylation of tRNALeu and also amino acid editing of
235 ility of essential amino acids (EAAs) limits aminoacylation of tRNAs by their cognate EAAs and activa
237 on general features, such as the position of aminoacylation on the 3'-terminal tRNA ribose, and the t
238 variant had a minimal effect on activation, aminoacylation or misaminoacylation activities relative
239 We identified components of an indirect aminoacylation pathway for Gln-tRNA(Gln) biosynthesis in
240 trate a potential role for the indirect tRNA aminoacylation pathway in regulating translational fidel
241 picoplast proceeds via an essential indirect aminoacylation pathway that is reminiscent of bacteria a
242 te Plasmodium falciparum apicoplast indirect aminoacylation pathway utilizes a non-discriminating glu
247 thanocaldococcus jannaschii tRNA(Cys) in the aminoacylation reaction for the two Methanococcus maripa
248 oduction by a tRNA synthetase is through the aminoacylation reaction intermediate aminoacyl-AMP, thus
249 c aminoacyl-adenylates as substrates in tRNA aminoacylation reaction may provide a way for incorporat
250 xpense of a significantly slower rate in the aminoacylation reaction, suggesting a previously unrecog
251 were otherwise completely inactive in direct aminoacylation reaction, thus bypassing the natural mech
252 cus is able to perform the first step of the aminoacylation reaction, which involves the activation o
260 Overall, the T-box consists of decoding and aminoacylation sensing modules bridged by a rigid pseudo
261 ive activation of cognate amino acids at the aminoacylation site and hydrolysis of misformed aminoacy
262 usion, we propose that the plasticity of the aminoacylation site in MST1 allows binding of Ser-AMP an
263 ing a structural motif unrelated to that for aminoacylation so that, remarkably, two motifs (one for
268 scriminator' structure, and interrogates its aminoacylation state using a steric filter fashioned fro
269 T-boxes directly bind tRNAs, assess their aminoacylation state, and regulate the transcription or
277 don of tRNA, while a 3' domain evaluates its aminoacylation status, overcoming an otherwise stable tr
278 ted the impact of hmt-tRNA(Phe) mutations on aminoacylation, structure, and translation elongation-fa
279 Thus, borrelidin competes with all three aminoacylation substrates, providing a potent and redund
280 helices seriously reduces the efficiency of aminoacylation, suggesting that communication requires c
281 ancestral proto-anti-codon RNA (pacRNA) auto-aminoacylation system and show that pacRNAs would natura
282 ere, we used an in vitro reconstituted lipid aminoacylation system to investigate the two phylogeneti
288 ed': one face closely mimics tRNA and drives aminoacylation, the other face diverges from tRNA and en
289 role in the evolution of AlaRSs by coupling aminoacylation to editing to prevent mistranslation.
294 her, competition among tRNA isoacceptors for aminoacylation underlies the robustness of protein synth
296 hanges in the steady-state kinetics of LeuRS aminoacylation were observed upon the addition of ProRS.
297 codon usage and several tRNAs showed reduced aminoacylation, which was conserved in fasted mice.
299 Previous work showed chiral preference of aminoacylation with a nonprotein, nonribozyme, RNA-direc
300 the specificity helix, accelerates tRNA(Trp) aminoacylation with approximately 10-fold specificity to