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1 ssing cofactors, including DROSHA, PASHA, or Argonaute.
2 f programmable gene-silencing proteins named Argonaute.
3 leosides 10 and 12, at the catalytic site of Argonaute.
4 hubs for self/non-self RNA discrimination by Argonautes.
5 e 5'-phosphorylated guides used by all known Argonautes.
6 restrict or enable interaction with specific Argonautes.
7 cterial Argonautes much more than eukaryotic Argonautes.
8 hat of RNA interference-mediating eukaryotic Argonautes.
9 s by gating small RNAs into specific nuclear Argonautes.
10 also measured the association of miRNAs with Argonaute 1 (Ago1) and Argonaute 2 (Ago2) to assess the
11 the DNA DAMAGE-BINDING PROTEIN 2 (DDB2) and ARGONAUTE 1 (AGO1) of Arabidopsis thaliana form a chroma
12 is likely to involve the RNA-binding protein Argonaute 1 (AGO1), as raw and AGO1 genetically interact
16 ed at 72 h posteclosion and 24 h PBM through Argonaute 1 cross-linking and immunoprecipitation follow
17 omplex between the paRNA and microRNA-guided Argonaute 1 that, together, recruit SUV39H1 and induce r
18 ticipated in angiogenesis by targeting AGO1 (argonaute 1) and upregulating VEGF (vascular endothelial
20 of RNA-DEPENDENT RNA POLYMERASE 6 (RDR6) to ARGONAUTE 1-derived cleavage products, resulting in more
24 rom RNA-induced silencing complex (RISC) and Argonaute 2 (Ago2) associated with therapeutic siRNA.
26 iation of miRNAs with Argonaute 1 (Ago1) and Argonaute 2 (Ago2) to assess the functional status of in
28 C virus (HCV) RNA genomes by recruiting host argonaute 2 (AGO2) to the 5' end and preventing decay me
29 novel mechanism whereby target engagement by Argonaute 2 (AGO2) triggers its hierarchical, multi-site
30 nding cofactor of APOBEC1 in RNA editing, or Argonaute 2 (AGO2), a key factor in the biogenesis of ce
32 a2 ceRNA through differential recruitment to Argonaute 2 (Ago2), and TGF-beta signalling driven by Tg
33 shown that AUF1 facilitates miRNA loading to Argonaute 2 (AGO2), the catalytic component of the RNA-i
34 ealed that AUF1 promoted let-7b loading onto Argonaute 2 (AGO2), the catalytic component of the RNA-i
35 te conserved and S-nitrosylated in mammalian Argonaute 2 (AGO2)-alters its function in controlling ge
37 reassembling complexes with the human enzyme Argonaute 2 (hAgo2) and Cryptosporidium single-stranded
38 2.3 A resolution crystal structure of human Argonaute 2 (hAgo2), a key nuclease in the RNAi pathway,
39 1 suppresses its transcription by recruiting Argonaute 2 and inhibiting RNA polymerase II binding.
40 proteins, including Fem-3-binding-factor 2, Argonaute 2 and Ribonuclease III, NucleicNet can accurat
41 alized by endothelial cells, where the miRNA-Argonaute 2 complexes modulate target gene expression an
42 trate that such EVs contain functional miRNA-Argonaute 2 complexes that are derived from the host RBC
45 (PAR-CLIP), we isolated RNAs associated with Argonaute 2 in the RNA-induced silencing complex (RISC)
47 d and supplementary helix fitting into human Argonaute 2 protein (Ago2), reminiscent of an active sta
48 compartments and loaded into newly generated Argonaute 2 protein complexes weeks after dosing, enabli
49 n, and miR-3189-3p coimmunoprecipitated with Argonaute 2 together with two of its major predicted gen
51 a robust RNAi pathway that links to TGS via Argonaute 2-2 (Ago2-2) associated 27-nucleotide small RN
53 initiated the decay of both protein-free and Argonaute 2-loaded miRNAs via endonucleolytic cleavage a
59 h RNA-induced silencing complex constituents argonaute-2 (Ago2) and fragile X mental retardation-rela
61 olecule FRET to directly visualize how human Argonaute-2 (Ago2) searches for and identifies target si
62 these modifications impact interactions with Argonaute-2 (Ago2), the molecular target of siRNAs, is n
65 ve determined the crystal structure of human Argonaute-2 in complex with the metabolically stable 5-(
66 inity of the 5-E-VP -modified siRNA to human Argonaute-2 in-vitro, as well as the enhanced silencing
67 he 5 binding site in the Mid domain of human Argonaute-2 is able to adjust the key residues in the 5-
70 RNA processing machinery including Dicer and Argonaute-2, which allow for cell-free pre-miRNA process
71 sferase 1 (PNPT1) and has higher affinity to Argonaute-2, which may contribute to its higher stabilit
73 hila, two Piwi proteins, Aubergine (Aub) and Argonaute-3 (Ago3), localize to perinuclear "nuage" gran
74 urvival and viral titers of Piwi, Aubergine, Argonaute-3, and Zucchini mutant flies were similar to t
75 de novo DNA methylation by interacting with ARGONAUTE 4 (AGO4) and by controlling the local abundanc
79 TE mRNAs are directly incorporated into the ARGONAUTE 6 (AGO6) protein and direct AGO6 to TE chromat
82 ecipitation (HITS-CLIP) experiments of human Argonaute (AGO) during HCV infection showed robust AGO b
83 the mechanism of FMRP's role in suppressing Argonaute (AGO) family members' association with mRNAs b
88 and ligation of miRNA-target chimeras on the Argonaute (AGO) protein to globally map miRNA interactio
89 specificity to guide the silencing effector Argonaute (AGO) protein to target mRNAs via a base-pairi
90 he tiny regulatory RNAs, form complexes with Argonaute (Ago) proteins and inhibit gene expression in
91 interact with members of the same family of Argonaute (Ago) proteins and their function in target re
97 As effectors in the RNA silencing pathway, ARGONAUTE (AGO) proteins are targeted by some VSRs, such
105 ring microRNA (miRNA)-guided gene silencing, Argonaute (Ago) proteins interact with a member of the T
107 be inhibited by VSRs, small RNAs (sRNAs) and Argonaute (AGO) proteins seem to be the most frequent ta
108 osslinking immunoprecipitation (CLIP) of the Argonaute (AGO) proteins to characterize strengths and s
113 e small noncoding RNAs are incorporated into Argonaute (Ago) proteins, where they direct post-transcr
114 (miRNAs) act as sequence-specific guides for Argonaute (AGO) proteins, which mediate posttranscriptio
117 e proteomics, and RNA immunoprecipitation of Argonaute (Ago), a component of the RNA-induced silencin
118 We identified homologs of DICER-LIKE (DCL), ARGONAUTE (AGO), and other genes involved in small RNA p
120 ate gene expression through association with Argonaute (Ago), which also protects miRNAs from degrada
121 NA)-guided transcriptional gene silencing by Argonaute (Ago)-containing complexes is fundamental to g
123 through small interfering (si) RNA-directed, ARGONAUTE (AGO)-mediated cleavage of homologous transcri
124 distant from fungi, employ the host plant's Argonaute (AGO)/RNA-induced silencing complex for virule
125 Argonaute crosslinking immunoprecipitation (Argonaute [Ago]-CLIP) sequencing in miR-122 knockout and
126 are enriched for 5' nucleotide bias against Argonaute-(AGO)-loading, but also additional 3' and cent
127 ), Tas3 (protein with unknown function), and Argonaute (Ago1), plays an important role in RNAi-mediat
128 s further revealed no significant changes of argonaute (AGO1, AGO2) and endoribonuclease dicer (DICER
131 that IGF2BP2 is an accessory protein of the argonaute (AGO2)-miR-33a/b-RISC complex, as it directly
135 n a Caenorhabditis elegans microRNA-specific Argonaute ALG-1 (Argonaute-like gene) that are antimorph
136 ng the rules for nucleic acid hybridization, Argonautes allow oligonucleotides to serve as specificit
139 tribution of distinct miRNAs between the two Argonautes and the ability of one of them to load additi
140 RNAi genes including those coding for Dicer, Argonaute, and double-stranded RNA-binding proteins (dsR
141 ate-binding pocket in the Dicer-2 PAZ (Piwi, Argonaute, and Zwille/Pinhead) domain is crucial for the
143 l similarities between human and prokaryotic Argonautes are consistent with shared mechanistic proper
144 domains of life and suggests that eukaryotic Argonautes are derived from DNA-guided DNA-interfering h
145 NA hybridization-a small RNA or DNA bound to Argonaute as a guide no longer follows the well-establis
146 d suggest that stress-induced alterations in Argonaute-associated sRNAs can target the deployment of
147 pression was mediated by a redistribution in Argonaute association, from let-7 to non-let-7 microRNA
148 ion systems (R-M), abortive infection (Abi), Argonaute-based interference, as well as clustered regul
149 h hAgo via three of the GW/WG repeats in its Argonaute-binding domain: motif-1, motif-2, and the hook
152 used CLEAR (Covalent Ligation of Endogenous Argonaute-bound RNAs)-CLIP (Cross-Linking and Immuno-Pre
153 ermed CLEAR (covalent ligation of endogenous Argonaute-bound RNAs)-CLIP, which enriches miRNAs ligate
155 detected endogenous let-7 miRNA-induced and Argonaute-catalysed endonucleolytic cleavage on target m
156 long tRF-3s and tRF-5s that could enter into Argonaute complexes are not induced by ANG overexpressio
158 the function might require interaction with Argonaute components of the silencing machinery, as was
159 ructure and silence transcription by guiding Argonaute-containing complexes to complementary nascent
160 originating from long noncoding RNAs, guide Argonaute-containing effector complexes to complementary
162 rhabditis elegans has revealed the essential Argonaute CSR-1 to play key nuclear roles in modulating
164 uencing the efficiency of siRNA loading into Argonaute, degradation of cleaved passenger strand and d
168 hopping products are selectively loaded onto Argonaute, enabling DNA-guided defense against foreign D
169 nd structure-based alignments suggested that Argonautes encoded within CRISPR-cas [clustered regularl
170 umour suppressor activity for the Drosophila Argonaute family RNA-binding protein AGO1, a component o
172 microRNA* strands present in the ALG-1(anti) Argonaute far in excess of the corresponding mature micr
175 Biochemical assays have demonstrated that Argonaute functions by modulating the binding properties
181 cing, the physical interaction between human Argonaute (hAgo) and GW182 (hGW182) is essential for fac
182 the knockdown of f7 occurs when knockdown of argonautes happens and not when rnaseh knockdown was per
183 The RNA cleavage ("Slicer") activity of Argonaute has been implicated in both sRNA maturation an
184 A-binding sites for cZNF292 were detected in Argonaute high-throughput sequencing of RNA isolated by
186 e PIWI-class Argonaute PRG-1 and the nuclear Argonaute HRDE-1 that maintains trans-generational silen
187 ID-1, a primary Argonaute RDE-1, a secondary Argonaute HRDE-1, and an RNase D homolog MUT-7, maintena
188 into the nuclear RNAi pathway involving the Argonaute HRDE-1, concurrent with a reduction in the exp
189 hway to produce siRNAs that bind the nuclear Argonaute HRDE-1, resulting in dramatic defects in germ
191 Both set-32 and the germline nuclear RNAi Argonaute, hrde-1, are required for nuclear RNAi-induced
192 were generated by cross-linking followed by Argonaute immunoprecipitation and sequencing (Ago CLIP-s
194 tified and characterized a family of nuclear Argonaute-interacting proteins (ENRIs) that control the
195 ovide a near-comprehensive analysis of miRNA-Argonaute interactions in C. elegans and reveal a new ro
197 These findings demonstrate that the role of Argonautes is conserved through the bacterial and archae
198 s elegans microRNA-specific Argonaute ALG-1 (Argonaute-like gene) that are antimorphic [alg-1(anti)].
199 combined results reveal the mechanisms that Argonaute likely uses to efficiently identify miRNA targ
200 ally assess their significance, we sequenced Argonaute-loaded microRNAs to define functionally engage
202 ement of relative binding affinities between Argonaute-miRNA complexes and all sequences <=12 nucleot
203 the CRISPR-associated Marinitoga piezophila Argonaute (MpAgo) protein cleaves single-stranded target
205 ENRI-1/2 prevent misloading of the nuclear Argonaute NRDE-3 with small RNAs that normally effect ma
206 is compaction requires the small RNA-binding Argonaute NRDE-3, the pre-mRNA associated factor NRDE-2,
208 Here we analyse the activity of a bacterial Argonaute nuclease from Clostridium butyricum (CbAgo) in
214 ic gap, we characterize the functions of two Argonaute paralogs in the sea anemone Nematostella vecte
215 , the tuning action of a small RNA-catalytic Argonaute pathway generates oocytes capable of supportin
217 s both Dicer-dependent and Dicer-independent Argonaute pathways and provide insight into how cells an
218 led to the emergence of small RNA-catalytic Argonaute pathways in the female germline as a post-tran
219 ntersecting forebrain miR profiles that were Argonaute precipitated, synaptic vesicle target enriched
221 NA (piRNA) cluster; we observe that the Piwi Argonaute PRG-1 is involved in the regulation of nictati
222 iota-dependent S-nitrosylation of C. elegans Argonaute protein (ALG-1)-at a site conserved and S-nitr
225 e sites of occupancy by Piwi, a piRNA-guided Argonaute protein central to transposon silencing in Dro
226 ponent of P granules, the endo-siRNA-binding Argonaute protein CSR-1, has recently been ascribed with
230 died, DNA-guided DNA endonuclease, TtAgo, an Argonaute protein from the Eubacterium Thermus thermophi
231 hod for investigating an early step in RNAi, Argonaute protein loading with small RNAs, which is enab
234 f guide-independent cleavage activity for an Argonaute protein potentially serving as a guide biogene
243 l physiology and disease by associating with Argonaute proteins and downregulating partially compleme
245 lant tRFs are sorted into different types of ARGONAUTE proteins and that they have potential target c
246 "seed" mechanism reminiscent of that used by Argonaute proteins during RNA interference in eukaryotes
247 Here, we review current understanding of Argonaute proteins from a structural prospective and dis
248 arts et al. (2017) discover that prokaryotic Argonaute proteins generate their own DNA guide strands
252 miRs were readily co-immunoprecipitated with Argonaute proteins in vivo and were active in luciferase
258 We find that both eukaryotic and prokaryotic Argonaute proteins reshape the fundamental properties of
260 ely 23 to 30 nucleotides bound to PIWI clade Argonaute proteins silence transposons in a manner that
261 RNAs and small interfering RNAs that recruit Argonaute proteins to complementary RNAs for degradation
262 ptional regulation of human genes by guiding Argonaute proteins to complementary sites in messenger R
266 ense against transposable elements and guide Argonaute proteins to nascent RNA transcripts to induce
267 icroRNAs repress mRNA translation by guiding Argonaute proteins to partially complementary binding si
269 29 nucleotide (nt) small RNAs complexed with argonaute proteins to suppress parasitic mobile sequence
271 ike eukaryotic proteins, several prokaryotic Argonaute proteins use small DNA guides to cleave DNA, a
272 omoting loading of derivative 5p miRNAs into Argonaute proteins via a Dicer-coupled 5' monophosphate-
273 stems, including innate immunity centered on Argonaute proteins, bacteriophage exclusion, and new typ
275 progress has been made toward understanding Argonaute proteins, small RNAs, and their roles in eukar
276 RdRP recruitment and mRNA silencing require Argonaute proteins, which are generally thought to degra
279 ithin the germline requires SID-1, a primary Argonaute RDE-1, a secondary Argonaute HRDE-1, and an RN
280 egans, the enzymatic activity of the primary Argonaute, RDE-1, is not required for silencing activity
281 ) and 'activating' siRNAs bound by the CSR-1 Argonaute require the DRH-3 helicase, an RdRP component.
282 ison of EndoV with its homologs RNase H1 and Argonaute reveals the principles by which these enzymes
283 use partial base-pairing characteristics of Argonaute RNPs to bind mRNAs randomly in Drosophila, act
285 additional evidence that fission yeast siRNA-Argonaute silencing complexes are recruited to target lo
288 gether, our data suggest the evolution of an Argonaute subclass with noncanonical specificity for a 5
289 ich have an unusual Dicer and a conventional Argonaute that are both required for gene silencing.
291 ntary mRNA targets while in association with Argonaute, the effector protein of the miRNA-mediated si
294 cterium Thermus thermophilus, the DNA-guided Argonaute TtAgo defends against transformation by DNA pl
295 tic structural study of Thermus thermophilus Argonaute (TtAgo) ternary complexes containing single-ba
297 th 'silencing' siRNAs bound by Worm-specific Argonautes (WAGO) and 'activating' siRNAs bound by the C
300 Dicer is phosphorylated in the platform-Piwi/Argonaute/Zwille-connector helix cassette upon induction