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1 ray-based comparative genomic hybridization (array CGH).
2 ray-based comparative genomic hybridization (array CGH).
3 ough implementation of microarray-based CGH (array CGH).
4 ray-based comparative genomic hybridization (array CGH).
5  by array-comparative genomic hybridization (array CGH).
6 copy number variant that was not detected by array CGH.
7       We describe here our implementation of array CGH.
8 ested by chromosome 21 deletions detected by array CGH.
9  DNA isolation and subsequent performance of array CGH.
10 chromosome 17q21.3, detected in each case by array CGH.
11  woman diagnosed with WHS in her thirties by array-CGH.
12 nomic copy number changes by high-resolution array-CGH.
13  number measurements by MAPH/REDVR, MLPA and array-CGH.
14  lines under analysis were compared with BAC array CGH; 77% (n = 44) of the autosomal chromosomes use
15 idization and single nucleotide polymorphism arrays (CGH-A; SNP-A) can be used for analysis of somati
16 to amplify frozen and FFPE tissue for use in array CGH (aCGH).
17                                              Array CGH analysis of six paired pre- and post-neoadjuva
18                              Cytogenetic and array CGH analysis of TOSE cells also revealed a focal g
19 d-read sequencing as well as karyotyping and array CGH analysis to identify a wide spectrum of genome
20                                              Array CGH analysis was used to detect a recurrent deleti
21 ome amplification and genomic alterations by array CGH analysis, indicating that Aurora-A overexpress
22                                        Using array CGH analysis, we have identified six overlapping m
23                                              Array-CGH analysis identified REST as a frequent target
24 n conditional random field, a new integrated array-CGH analysis method for jointly classifying tumors
25                                              Array-CGH analysis showed that R337H+ patients presented
26 erated melanoma formation after UV exposure, array-CGH analysis was effective in distinguishing pheno
27 lls, which do not provide sufficient DNA for array-CGH analysis.
28 icroarray comparative genomic hybridization (array CGH) analysis of DNA copy number variation in a se
29  analysed, all eleven imbalances detected by array CGH and confirmed by FISH or Q-PCR were also detec
30                               By integrating array CGH and expression array data, we reveal genes who
31  with unbalanced insertions identified using array CGH and FISH in 4909 cases referred to our laborat
32 in 4909 cases referred to our laboratory for array CGH and found to have copy-number abnormalities.
33     These results show the power of combined array CGH and SAGE analysis for the identification of ca
34 f amplicons, we developed a method combining array CGH and serial analysis of gene expression (SAGE)
35  this resource routinely for high-throughput array CGH and single-locus probe analysis of a range of
36  from tumor biopsies, which was coupled with array CGH and targeted resequencing.
37 an be serially transplanted and according to array CGH and whole exome sequencing, the pathogenesis o
38 e combination of next generation sequencing, array-CGH and fluorescence in situ hybridization technol
39 ooked because they may be missed by FISH and array-CGH and may be interpreted as insertions by paired
40 ray-based comparative genomic hybridization (array CGH) and spectral karyotype (SKY) analysis, none o
41 ray-based comparative genomic hybridization (array-CGH) and detected significant DNA copy number chan
42                  Using homozygosity mapping, array CGH, and exome sequencing, we uncovered bi-allelic
43 ain and loss were defined more accurately by array CGH, and several small regions of deletion were de
44 ts are the first to establish the utility of array-CGH as a means of etiology-based tumor classificat
45 om designed 4-Mb tiling-path oligonucleotide array CGH assay.
46 ist the use of higher-resolution genome-wide array CGH assays for clinical purposes.
47 ion array-comparative genomic hybridization (array-CGH) assays were performed comparing the subject g
48 dy to combine the modalities of zoo-FISH and array CGH between different avian species.
49 as a distinctive gene expression profile; 2) array CGH can be applied successfully to frozen or forma
50  normal human cells and genomic profiling by array-CGH (cDNA arrays, 100 kb resolution) and by real-t
51 he analysis of the genome, as exemplified by array-CGH (Comparative Genomic Hybridization), scanning
52 lly, the accumulation and annotation of such array CGH data can lead to the rapid identification of p
53              We also present the analyses of array CGH data from breast cancer cell lines to show the
54   The visualization and summarization of the array CGH data outputs, potentially across many samples,
55  integrative analysis of gene expression and array CGH data revealed DNA copy number alterations at t
56 a subset of the calls that differed from the array CGH data sets.
57                        Clonality analysis of array CGH data suggested that multiple CRC primary tumor
58 cal and experimental exploration of a set of array CGH data, including both synthetic data and real d
59  methods to identify aberration regions from array CGH data, many recent research work focus on both
60 ompare 11 different algorithms for analyzing array CGH data.
61 -ARRAY) for detecting copy-number changes in array CGH data.
62 t wavelet transform based approach to smooth array CGH data.
63 rinkage estimator respectively to smooth the array CGH data.
64 cable to both next-generation sequencing and array CGH data.
65                                          Our array-CGH data also shows an XY-homologous region close
66  reconstructing common ancestral genomes via array-CGH data analysis and by comparing representative
67   Developing effective methods for analyzing array-CGH data to detect chromosomal aberrations is very
68 g the accuracy of an algorithm for analyzing array-CGH data, it is commonly assumed that noise in the
69 thods have been proposed for the analysis of array-CGH data.
70 lic array comparative genomic hybridization (array CGH) data, we show that the REPA/B structure is al
71 s have been proposed for analyzing the large array CGH datasets, the relative merits of these methods
72                              Three published array-CGH datasets are used to demonstrate our approach.
73                                              Array-CGH detected 6p22.3 amplification in 8/91 invasive
74 ion of genomic copy number variants (CNV) in array CGH experiments compared to the state-of-the-art,
75 pplied our method to both simulated data and array-CGH experiments on glioblastoma and adenocarcinoma
76                                              Array-CGH findings revealed predicted duplications in af
77 ve CT method) were performed to validate the array-CGH findings.
78             CNV-seq offers an alternative to array CGH for copy number analysis with resolution and f
79                 However, attempts to harness array-CGH for single-cell analysis to provide improved r
80 in-embedded samples of DFSP were analyzed by array CGH (four cases) and DNA microarray analysis of gl
81 ing array comparative genomic hybridization (array CGH), gene expression arrays, and fluorescence in
82 ray-based comparative genomic hybridization (array CGH) has improved rates of detection of chromosoma
83 ray-based comparative genomic hybridization (array-CGH) has emerged as a technique allowing high-thro
84 n identified between chicken and turkey; and array CGH identified 16 inter-specific CNVs.
85                                              Array CGH identified gain at 8q24.12-q24.13, the region
86                  Moreover, classification by array-CGH identified key CNAs unique to each class, incl
87                                     Overall, array-CGH identified relatively small genomic regions as
88 nd review some of the recent applications of array CGH in cancer and medical genetics.
89                  These results indicate that array CGH is a powerful technique to study rearrangement
90                                              Array-CGH is a powerful tool for the detection of chromo
91   A fundamental question is whether noise in array-CGH is indeed Gaussian, and if not, can one exploi
92 ray-based comparative genomic hybridization (array CGH) is a highly efficient technique, allowing the
93 ray-based comparative genomic hybridization (array CGH) is a powerful new technology capable of ident
94 nome hybridization (CGH) to DNA microarrays (array CGH) is a technique capable of detecting deletions
95 ray-based comparative genomic hybridization (array-CGH) is a popular technology for determining this.
96 ighly amplified regions in MCF-7 detected by array CGH located in the 1p13.1-p21.1, 3p14.1-p14.2, 17q
97                                              Array CGH may help distinguish between these 2 entities
98 ing array comparative genomic hybridization (array CGH), measuring copy-number gains and losses among
99                                    Published array CGH methods have relied on large genomic clone (fo
100      Array comparative genome hybridization (array-CGH) methods provide high-throughput data on genet
101                                              Array CGH of DNA extracted either from frozen tumor samp
102 ray-based comparative genomic hybridization (array CGH) on 64 prostate tumor specimens, including 55
103 med array comparative genomic hybridization (array-CGH) on specimens from 64 patients with newly diag
104 were successfully amplified and screened via array-CGH or Taqman PCR that displayed retention of the
105 ve genomic hybridization to DNA microarrays (array CGH) overcomes these limitations by allowing effic
106                                          The array CGH panel included 90 animals from 11 Bos taurus,
107 assessment obtained using an oligonucleotide array CGH platform designed to query CNVs at high resolu
108 ion array comparative genomic hybridization (array CGH) platform.
109  and future costs comparable to conventional array CGH platforms and with less stringent sample requi
110 reover, genomic profiling of these tumors by array CGH pointed to regions of loss on chromosomes 6 an
111 s a number of popular algorithms to a single array CGH profile entered by the user.
112 ing array comparative genomic hybridization (array CGH), quantitative PCR (qPCR), and fluorescent in
113 ), fluorescent in-situ hybridization (FISH), array-CGH, quantitative microsatellite analysis (QUMA),
114  the results were comparable with those from array CGH, regions of those genetic changes were defined
115 ermine whether copy-number gains detected by array CGH represent tandem duplications or unbalanced in
116            Drawing relevant conclusions from array-CGH requires computational methods for partitionin
117                                          All array CGH results agree with the deletion sizes and loca
118                                              Array CGH revealed complex rearrangements in eight patie
119 ybridization using whole-genome microarrays (array CGH) revealed variation in 24 to 67 genes in isola
120                           For murine tumors, array CGH should provide even greater advantage, since m
121  (MSB) procedures; it considers the observed array-CGH signal as sampling from a probability-density
122 earrangements by FISH with BACs and fosmids, array CGH, Southern-blot hybridization, MLPA, RT-PCR, an
123                                     However, array CGH studies of the human genome noting false negat
124  well-suited to high resolution whole genome array CGH studies that use array probes derived from lar
125                                              Array CGH technologies enable the simultaneous measureme
126 oftware tool for SV analysis using data from array CGH technologies, which is also amenable to short-
127 xisting methods for detecting aberrations in array-CGH than the Gaussian noise case.
128                    By high-resolution tiling array CGH, the smallest common deletion targeted just on
129               This study is the first to use array CGH to characterize IPMNs.
130                                      We used array CGH to create the first map of DNA copy number var
131                               Application of array CGH to tumor specimens makes genetic diagnosis of
132 sed array comparative genomic hybridization (array CGH) to define minimum common amplified regions an
133 ion array comparative genomic hybridization (array CGH) to map the minimal amplified regions.
134  population of loci showing amplification by array-CGH was enriched for palindromes detected by GAPF
135 BAC array comparative genomic hybridization (array CGH) was employed to test DNA from 93 individuals
136                                        Using array CGH, we further narrowed the loci for LOH9 and LOH
137        By using whole-genome oligonucleotide array CGH, we have identified deletions at 13q32.1 segre
138        Using FISH, linear amplification, and array CGH, we identified a 126-kb duplicated region from
139                                    By custom array-CGH, we further investigated this family and repor
140                        Using high-resolution array-CGH, we identified unique duplications of a region
141                         Exome sequencing and array CGH were performed on available samples followed b
142                    Newer technology, such as array-CGH, when combined with cDNA microarrays and tissu
143 ed behavior among genomic loci suggests that array CGH will be increasingly important in understandin
144                           We anticipate that array CGH will change the diagnostic approach to many co
145 some abnormality, we coupled high-resolution array CGH with breakpoint junction sequencing of a diver
146                                Comparison of array CGH with existing multiplex-fluorescence in situ h
147 ray-based comparative genomic hybridisation (array-CGH) with male and female Duroc genomic DNA on a p

 
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