ライフサイエンスコーパス: bacterial species

1 ridization (for levels and proportions of 40 bacterial species).

2 m a ring-like structure, the Z-ring, in most bacterial species.

3 our approach with a synthetic mixture of 12 bacterial species.

4 s phages-have been described for hundreds of bacterial species.

5 profound effects on the behavior of resident bacterial species.

6 lution assays for a range of antibiotics and bacterial species.

7 trointestinal tract, and is composed of >770 bacterial species.

8 ng also plays a role among certain clades of bacterial species.

9 ence of a phylogenetic tree that relates all bacterial species.

10 intestines bound phylogenetically unrelated bacterial species.

11 osition in -10 elements of promoters in most bacterial species.

12 the lectin has evolved to recognize distinct bacterial species.

13 of other metabolic processes, especially in bacterial species.

14 in a catalytic domain conserved across many bacterial species.

15 anding polar growth strategy in a variety of bacterial species.

16 ch identified at least one archaeal and five bacterial species.

17 dditional novel T6SS genomic loci in diverse bacterial species.

18 that modulates biofilm formation across many bacterial species.

19 d and it is not essential for growth in many bacterial species.

20 ntibiotic resistance and other traits to new bacterial species.

21 for molecular epidemiology studies of other bacterial species.

22 r host-pathogen interactions involving other bacterial species.

23 f complex systems such as consortia of mixed bacterial species.

24 is known about RNase E homologues from other bacterial species.

25 nk this to the increasing number of reactive bacterial species.

26 otic resistance spreading in many pathogenic bacterial species.

27 during biofilm formation by a Gram-negative bacterial species.

28 ology and/or pathogenesis of a wide range of bacterial species.

29 ed for detection of 7 potentially pathogenic bacterial species.

30 l niches, prompting an adaptive radiation of bacterial species.

31 members of the GpsB interactome in all three bacterial species.

32 methane or methanol, is a feature of various bacterial species.

33 l antibiotics tested across highly divergent bacterial species.

34 ed instead of methods specific to individual bacterial species.

35 change non-specialized genetic cargo between bacterial species.

36 hat Nus factor autoregulation occurs in many bacterial species.

37 s elegans can be induced to settle by single bacterial species.

38 direct RS complexation by LS cages in other bacterial species.

39 lism across the major obligate intracellular bacterial species.

40 family and hundreds of nitrogen (N2)-fixing bacterial species.

41 , which included all coding sequences of 100 bacterial species.

42 presence has also been confirmed in several bacterial species.

43 gene for identification, we cultured 329 new bacterial species.

44 e levels of genetic cohesion associated with bacterial species.

45 in Mie scatter spectra created by different bacterial species.

46 isolated from various Gram (+) and Gram (-) bacterial species.

47 by increasing antibiotic resistance in many bacterial species.

48 CR and then perform dHRM to identify the two bacterial species.

49 ty of chemical modifications among different bacterial species.

50 e a promising probe for detecting Pse across bacterial species.

51 d competitive metabolic interactions between bacterial species.

52 functionally important in related pathogenic bacterial species.

53 as tested against seven foodborne pathogenic bacterial species.

54 'culture-difficult' or 'not-yet-culturable' bacterial species.

55 olonized with different ampicillin-resistant bacterial species.

56 ent adjacent to pelABCDEFG in >100 different bacterial species.

57 r 59 plant, 256 animal, 115 archeal and 1678 bacterial species.

58 83 amplicon sequence variants as proxies for bacterial species.

59 foreign genes in a variety of Gram-negative bacterial species.

60 omplex than that of prototype T4SSs in other bacterial species.

61 ediators were highly correlated with certain bacterial species.

62 diates communication within and between many bacterial species.

63 e-assembled genomes (MAGs), representing 150 bacterial species.

64 it mobile genetic elements (MGEs) among many bacterial species.

65 h the outer cell surface of S-layer-carrying bacterial species.

66 y profiles were obtained by HOMINGS, and 408 bacterial species and 84 genus probes were assigned.

67 isms of 2,7-anhydro-Neu5Ac catabolism across bacterial species and a novel sialic acid transport and

68 This method can be used with diverse bacterial species and applied to genome-scale investigat

69 olecules produced and released by nearly all bacterial species and are classified according to the ch

70 uced by both gram-positive and gram-negative bacterial species and are used to kill or inhibit other

71 ogues across Gram-negative and Gram-positive bacterial species and co-occurrence with sialic acid tra

72 strains, and they were selective over other bacterial species and eukaryotic cells, metabolically st

73 oss-reactivity study using 74 non-Bordetella bacterial species and five yeast species revealed that t

74 years of antibiotic resistance data from 10 bacterial species and genera of clinical interest from o

75 le is a signalling molecule produced by many bacterial species and involved in intraspecies, interspe

76 aprin rapidly kills N. gonorrhoeae and other bacterial species and is non-irritating in ocular assays

77 on revealed significant associations between bacterial species and metabolic phenotypes, highlighting

78 Our findings identified novel bacterial species and pathways that associated to specif

79 man signal from bacterial cells and numerous bacterial species and phenotypes.

80 er-2 (AI-2), is widely produced by different bacterial species and presumed to enable V. cholerae to

81 preserve the physiological state of selected bacterial species and seawater bacterial community in co

82 nterfacial (micro)environment depends on the bacterial species and strain even when differences in bi

83 ntestinal domination by antibiotic-resistant bacterial species and strains on the colonic mucosa.

84 efflux pump for cationic biocides in several bacterial species and that increased efflux through SmvA

85 he human urothelium and suggest that diverse bacterial species and the adaptive immune response play

86 ples contained genetic material from various bacterial species and the in-depth analysis uncovered th

87 studies are increasingly defining commensal bacterial species and the inhibitory mechanisms they use

88 ncidence of infections caused by seven major bacterial species and their drug-resistant variants in a

89 As a demonstration, multiple bacterial species and their susceptibility profiles in a

90 r weight loss included features of diet, gut bacterial species and urine metabolites (ROC-AUC: 0.84-0

91 reportedly vary between RNAPs from different bacterial species and, probably, different types of tran

92 Nus factors are broadly conserved across bacterial species, and are often essential for viability

93 CRISPR-Cas immune systems within and between bacterial species, and highlight the strong selective be

94 recombination parameters for a wide range of bacterial species, and inferred the distribution of shar

95 EFG operon is highly conserved among diverse bacterial species, and Pel may therefore be a widespread

96 tives inhibit the growth of other pathogenic bacterial species, and why high serum levels of these in

97 d that T3SS inner rod proteins from multiple bacterial species are also detected.

98 Bacterial species are hosts to horizontally acquired mob

99 Bacterial species are identified using integrated experi

100 ffectively deplete rRNA of diverse non-model bacterial species are lacking.

101 le and fast detection and differentiation of bacterial species are required, for instance, in medicin

102 However, the majority of bacterial species are still dependent on the ancient res

103 measurements on two different gram-positive bacterial species as the cells uptake membrane-specific

104 In addition, specific BV-associated bacterial species as well as a polymicrobial cocktail si

105 etic Biology approaches towards non-standard bacterial species as well as genetically programming new

106 terium Mannheimia haemolytica is the primary bacterial species associated with bovine respiratory dis

107 to changes in the coral pathobiome (multiple bacterial species associated with disease) and general h

108 d HMP cohorts evidenced different subsets of bacterial species associated with HLA-A29 status, likely

109 d, a more diverse microbiota, an increase in bacterial species associated with periodontal disease, m

110 Mannheimia haemolytica is the primary bacterial species associated with respiratory disease of

111 Presence of 40 periodontal bacterial species at baseline and 3 months was semiquant

112 op molecules active against a broad range of bacterial species at the top of the WHO priority list.

113 oach for "omics-driven" classification of 15 bacterial species at various taxonomic levels achieving

114 , yet prediction of unknown classes, such as bacterial species, at upper hierarchy levels may be suff

115 GpsB with peptidoglycan synthases from three bacterial species (Bacillus subtilis, Listeria monocytog

116 o profoundly affect the P450 profiles in the bacterial species belonging to the phylum Firmicutes.

117 n biomarker levels (IL-1beta and sRANKL) and bacterial species between peri-implant and periodontal s

118 the human colon, formate is produced by many bacterial species but is normally detected only at low c

119 gase C (LigC) complex also co-exists in many bacterial species but its function is unknown.

120 s CarD, a transcription factor found in many bacterial species but not in beta- and gamma-proteobacte

121 have been found in animal, plant, fungal and bacterial species, but have not yet been identified in v

122 Bacteriophages (phages) infect many bacterial species, but little is known about the diversi

123 eats are conserved for BAPs across different bacterial species, but the function of these domains is

124 the abundance and potential function of gut bacterial species by next-generation bacterial sequencin

125 the applicability of this approach to other bacterial species by predicting sRNA-mRNA binding region

126 Here we identify 1,952 uncultured candidate bacterial species by reconstructing 92,143 metagenome-as

127 usly defining the core essential genome of a bacterial species by studying many pathogen strains and

128 pendent on the initial identification of the bacterial species by use of a kmer-based approach.

129 ostmenopausal RUTI patients and that diverse bacterial species can be isolated from the bladder tissu

130 Further, it appears that certain oral bacterial species can contribute to carcinogenesis, in p

131 the expression of ARGs by harmless commensal bacterial species can destroy antibiotics in the intesti

132 at rapid information regarding the infecting bacterial species can improve predictions substantially.

133 activity of SpoT (or its homologues in other bacterial species) can likely influence the cell cycle b

134 Here, we studied the interactions between 4 bacterial species capable of degrading metal working flu

135 genetic analysis demonstrated that different bacterial species (closely related to Muribaculum intest

136 Reconstitution with a single bacterial species, Clostridium scindens, or its derived

137 neralization performance for all pairs of 13 bacterial species co-cultured with MSH1, we built a Gaus

138 Understanding how a bacterial species comes to dominate infectious communiti

139 bjects who were HLA-A29 positive differed in bacterial species composition (beta diversity) compared

140 ffect of host genetic factors in shaping the bacterial species composition in the rumen by performing

141 We predict that over 1,000 bacterial species could activate NK cells through KIR2DS

142 Here, we investigated whether diverse bacterial species could modulate virus internalization i

143 Carriage rates for all three bacterial species declined over the 75-day study, but no

144 e many abundant taxa are indeed active, most bacterial species detected by conventional molecular pro

145 ted on plasmids or on the chromosome from 53 bacterial species distributed across different ecologica

146 However, recognized bacterial species do not adhere to another species-like

147 address how the study of a growing number of bacterial species enables the search for common principl

148 idyl ester dilution assays) and 9 intestinal bacterial species (Escherichia coli, Lactobacillus acido

149 presented higher mean total levels of the 40 bacterial species evaluated, higher proportions of red c

150 hly important target for PF orthologs of the bacterial species examined.

151 infection >10,000-fold, while PG from other bacterial species failed to recapitulate this.

152 T4P are essential, in many bacterial species, for processes as diverse as twitching

153 women or men (or >=10(2) CFU/ml of a single bacterial species from a single catheterized urine speci

154 mass to confirm the ability to detect intact bacterial species from a swab.

155 Certain bacterial species from genera such as Paracoccus, Pseudo

156 iches in different bloom phases, and certain bacterial species from the Pseudoalteromonadaceae might

157 ed Clostridium immunis, a previously unknown bacterial species from this family, that-when administer

158 Many bacterial species generate phenotypically heterogeneous

159 Multiple bacterial species, genes, and enzymes have already been

160 While transfer of ARGs between bacterial species has well-established dramatic public h

161 Other bacterial species have also been shown to respond to PQS

162 Few bacterial species have been reported to produce sterols

163 -TOF MS) has become the standard for routine bacterial species identification due to its rapidity and

164 Of the 267 bacterial species identified at >=0.02% abundance, 56 (2

165 cus aureus is one of the four most prevalent bacterial species identified in chronic wounds.

166 A core-genome analysis of 26 bacterial species identifies several core smORFs of unkn

167 Including information regarding the bacterial species improved the auROCs to 0.8-0.88.

168 Relative abundance of distinct bacterial species in CA patients is shown, consistent wi

169 oculum, route of infection and the causative bacterial species in different wild-type mouse backgroun

170 However, given the near-exclusive focus on bacterial species in establishing these protective benef

171 Consequently, fecal bacterial species in individuals with higher CMI in bloo

172 Thus, products secreted by multiple bacterial species in the milieu of the catheterized urin

173 The diversity of bacterial species in the oral cavity makes it a key site

174 ococcal carriage do not strongly impact most bacterial species in the oropharynx, variation in the up

175 air is found in 2,942 of the 16,286 distinct bacterial species in the RefSeq database.

176 y of the phytopathogen to compete with other bacterial species in vitro and in planta.

177 ed us to identify putative AI-2 receptors in bacterial species in which no receptors were known, as i

178 calis is one of the most frequently isolated bacterial species in wounds yet little is known about it

179 y of H(2)O(2) to antagonize susceptible oral bacterial species, including caries-associated Streptoco

180 quitous compound and can be utilized by many bacterial species, including enteric pathogens, as a car

181 conserved and found in the vast majority of bacterial species, including pathogens.

182 -canonical HD-GYP phosphodiesterases in many bacterial species, including phyla previously not known

183 to acute UTI, failed to detect a variety of bacterial species, including recognized uropathogens.

184 Understanding how these bacterial species increase a woman's risk of TV acquisit

185 Given that these two bacterial species infect the human population at high fr

186 al microbiota, including the presence of key bacterial species, influence a woman's risk of TV acquis

187 When two or more bacterial species inhabit a shared niche, often, they mu

188 s to identify food groups associated with 43 bacterial species involved in sulfur metabolism.

189 DMBT1 binding to multiple bacterial species involves its conserved Scavenger Recep

190 e of their implications in the divergence of bacterial species is currently limited.

191 The evidence for mechanosensing in select bacterial species is reinterpreted, with a focus on mech

192 itomizes these obstacles: this gram-negative bacterial species is the most prevalent agent of UTIs wo

193 ryotes, unique to mycobacteria and few other bacterial species, is the reaction between cytidine diph

194 wage and identified resistance in individual bacterial species isolated from environmental water sour

195 men; a single voided urine specimen with one bacterial species isolated in a quantitative count >=10(

196 catheterized urine specimen with one or more bacterial species isolated in a quantitative count of >=

197 ns (preferably within 2 weeks) with the same bacterial species, isolated in quantitative counts of >=

198 proves widespread across cationic agents and bacterial species, it will help explain why resistance t

199 We show that evolutionarily distinct bacterial species, L. monocytogenes and Shigella flexner

200 We recently found that the bacterial species Lactobacillus (L.) reuteri reverses so

201 Key vaginal bacterial species may contribute to the susceptibility t

202 Cas9 orthologs from other bacterial species may provide a rich and largely untappe

203 A multivariable analysis adjusted for bacterial species, McCabe-Jackson classification, and va

204 have implications for other biofilm-forming bacterial species.Most bacteria live in biofilms, surfac

205 It is compatible with a wide range of bacterial species of clinical, research, and industrial

206 Other bacterial species of the gut microbiota did not follow s

207 Haemophilus influenzae (NTHI) is a commensal bacterial species of the human nasopharynx; however, in

208 neutralization of IL-1alpha changes specific bacterial species of the intestinal microbiome, which is

209 grown from mixtures of motile and non-motile bacterial species on a soft agar surface.

210 utibacterium acnes is one of the most common bacterial species on human skin and can promote the comm

211 At the sequence variant (SV) level, akin to bacterial species, only 1 of the top 100 SVs was signifi

212 ated to determine if selection of individual bacterial species or strains could be discerned within t

213 re to the TopoI-CTD found in the majority of bacterial species outside Actinobacteria, including Esch

214 boratory microcosms, using cocultures of two bacterial species, P. putida and P. veronii.

215 metagenomes, which can contain thousands of bacterial species per gram of soil, imposes significant

216 om this mixture identified 15 +/- 5 distinct bacterial species per run.

217 Supragingival plaque harbors hundreds of bacterial species, playing a significant role in oral he

218 ibrosis patients that contain multiple mixed bacterial species, possess an HJ-like configuration.

219 rtantly, our findings show that sRNAs across bacterial species potentially may qualify as targets of

220 However, the bacterial species present and functions associated with

221 The method is able to deconvolute multiple bacterial species present in a specimen, is compatible w

222 was observed for DNA extracted from certain bacterial species previously detected in the brain, CSF

223 munoprophylaxis against antibiotic-resistant bacterial species, produced adverse effects in an in viv

224 which acidogenic, aciduric, and acid-adapted bacterial species promote a pathogenic environment, lead

225 PCR) for detection and identification of all bacterial species; real-time PCR (qPCR) assays targeting

226 r workflow on a large data set that contains bacterial species related to urinary tract infections.

227 changes that underpin the formation of a new bacterial species remain poorly understood.

228 ing for both Gram-positive and Gram-negative bacterial species requires at least 48-72 h.

229 ether significant vertical stratification in bacterial species richness and evenness (alpha diversity

230 ses to the Cas9 orthologs derived from these bacterial species, SaCas9 (S. aureus) and SpCas9 (S. pyo

231 creen to study around 200 effectors from six bacterial species, showing that over 30% of them interac

232 associated pneumonia specific changes and 2) bacterial species-specific changes in the exhaled gas.

233 influence the growth and viability of other bacterial species, specifically Staphylococcus aureus an

234 tive, electrical detection of the pathogenic bacterial species Staphylococcus aureus and antibiotic r

235 Another commensal skin bacterial species, Staphylococcus hominis, can inhibit E

236 tive whole-genome data sets from six diverse bacterial species: Staphylococcus aureus, Streptococcus

237 The cariogenic bacterial species Streptococcus mutans metabolizes sucro

238 text, extensive characterization of specific bacterial species such as Escherichia coli and Bacillus

239 r, it has been observed that strains of some bacterial species, such as Acinetobacter baumannii strai

240 Recently, the use of other bacterial species, such as Akkermansia muciniphila, has

241 Furthermore, closely related bacterial species, such as rhizobia, are able to transfe

242 ates < 1%, our approach identified many more bacterial species than the existing approaches such as t

243 tance against the immune response, using two bacterial species that are common sources of nosocomial

244 ylogenomics and metabolic modeling to detect bacterial species that are evolving by gene loss, with t

245 on four Gram-positive and four Gram-negative bacterial species that are highly relevant for environme

246 losporin with activity against Gram-negative bacterial species that are resistant to carbapenems and

247 urpose beta-lactam antibiotics activity with bacterial species that carry carbapenem-hydrolyzing clas

248 ribacter genus comprises insect endosymbiont bacterial species that cause destructive plant diseases,

249 ae is a Gram-negative, facultative anaerobic bacterial species that causes serious disease and can gr

250 in TGFB signaling had increased abundance of bacterial species that have been associated with the dev

251 mplex community largely populated by diverse bacterial species that provide metabolites, nutrients, a

252 thogen strains, together with enrichment for bacterial species that were antagonistic toward R. solan

253 series demonstrated its ability to identify bacterial species that were consistent with histological

254 complexity of interactions between a single bacterial species, the factors it produces and two speci

255 In diverse bacterial species, the global regulator Hfq contributes

256 used a logistic additive model adjusted for bacterial species, the McCabe-Jackson classification, an

257 Listeria may selectively deplete microbiota bacterial species to avoid excessive inflammation.

258 ations of compounds, materials, proteins, or bacterial species to drive scientific discovery.

259 tes the initial stages of attachment of many bacterial species to host cells.

260 IV effector proteins from six Gram-negative bacterial species to interact with the eukaryotic plasma

261 tion can increase the susceptibility of both bacterial species to rapid killing by immune cells and c

262 he general stress response (GSR) allows many bacterial species to react to myriad different stressors

263 est whether this state can be found in other bacterial species to survive deep starvation conditions.

264 This phenomenon was observed for 13 bacterial species, two of which - Pseudomonas fluorescen

265 evolve rapidly in natural environments(3,4), bacterial species typically evolve phage resistance by t

266 aled that CP inhibits iron uptake by several bacterial species under aerobic conditions.

267 Many Gram-negative bacterial species use contact-dependent growth inhibitio

268 We then analyzed hundreds of bacterial species using published genomic data, which su

269 ected at enrollment to identify and quantify bacterial species via high- performance sequencing.

270 ected at enrollment to identify and quantify bacterial species via high-performance sequencing.

271 but also leads to cascading effects on other bacterial species via interbacterial interactions.

272 When no knowledge regarding the infecting bacterial species was assumed, the ensemble model yielde

273 Relative abundance of bacterial species was highly comparable between sampling

274 ty of the method for analysis of mixtures of bacterial species was shown with ternary mixtures of Bac

275 By borrowing information from neighboring bacterial species, we are able to improve the statistica

276 Multiple bacterial species were detected in a higher proportion o

277 Twelve tick-borne bacterial species were detected, including two novel pat

278 ls, presence, and quantities of 11 different bacterial species were determined.

279 Contrary to AM, the same bacterial species were found in samples from healthy and

280 34 differentially abundant bacterial species were identified between SERT(+/+) and

281 ) and Gram-positive (Bacillus thuringiensis) bacterial species were monitored with WLI over time by c

282 d, one factor was that essential genes for a bacterial species were often defined based on a single o

283 When these bacterial species were placed in close spatial proximity

284 Specific fungal and bacterial species were strongly correlated with temperat

285 ated with health leading to the emergence of bacterial species, which are only present in low abundan

286 lated the availability of iron and biotin to bacterial species, which suggests that these may be cons

287 he statistical power of detecting associated bacterial species while controlling the FDR at desired l

288 We selected 20 bacterial species with 25 patterns of acquired resistanc

289 on approach, we were able to detect pairs of bacterial species with cooperation scores significantly

290 The human gut microbiome harbors hundreds of bacterial species with diverse biochemical capabilities.

291 is particularly hard to address using extant bacterial species with poorly understood current ecologi

292 gnificantly higher than the average pairs of bacterial species with similar phylogenetic distances.

293 interactions of many pathogenic or symbiotic bacterial species with their respective eukaryotic hosts

294 cid-producing and acid-tolerating (aciduric) bacterial species within dental biofilms.

295 the potential for broad impacts of fungi on bacterial species within microbiomes.

296 hat reflects susceptibility profiles of each bacterial species within only 30 min of antibiotic expos

297 the survival and metabolic behavior of other bacterial species within oral biofilm.

298 impacting its ability to compete with other bacterial species within the rhizosphere.

299 esignations involving clinically significant bacterial species would benefit clinical microbiologists

300 Comparable to ZapA from other bacterial species, ZapA from P. aeruginosa induced PaFts