1 A live demo
is available at
2 A more detailed protocol
is available at
3 python implementation of this method, CMash,
is available at
4 nine traits for 6.8 million common variants
is available at
5 ped to allow users to query the database and
is available at
6 ing genes in human, monkey and mouse genomes
is available at
7 ublicly accessible at and the inference code
is available at
8 A web server for performing predictions
is available at
9 rtium and The Jackson Laboratory PDX program
is available at
10 A web-server
is available at
11 AMPBenchmark
is available at
12 PI at and source code and benchmarking tests
are available at
13 tutorial, and public source code repository
are available at
14 A tutorial and documentation
are available at
15 A dedicated server
is available at .
16 A free online prediction service
is available at .
17 A software implementation
is available at .
18 b server and a command-line tool for PhenoSV
are available at .
19 The program is free and
is available at).
20 The Proteins API
is available at.
21 GppFst
is available at.
22 by Barnacle and the source code of Barnacle
are available at.
23 open-source R package implementing TimeCycle
is available at:
24 A stand-alone version of Effectidor II
is available at:
25 A user-friendly web application
is available at:
26 A python package
is available at: .
27 Sequential PCT levels
were available at 0 hrs and 24 hrs in 39 patients (52%).
28 In 66 patients, UACR measures
were available at 1 year.
29 Sixty-five eyes were enrolled, and 55
were available at 12M, accounting for loss to follow-up
30 Measured weight and height
were available at 13 time points throughout childhood.
31 data on ideal cardiovascular health metrics
were available at 15 (n=394), 17 (n=376), and 19 (n=298)
32 Data pertaining to voice rehabilitation
were available at 2 to 3 years and longer and 5 years an
33 ts treated, data from 94 eyes of 88 patients
were available at 2-year follow-up (86% of patients).
34 Weight data
were available at 24 months for 407 women (92.1% of the
35 all 24 months of the study and serum samples
were available at 24 months from 18/28 patients.
36 us measurements of Florida Current transport
are available at 27 degrees N since 1982.
37 Ponseti treatment of clubfoot
was available at 46% (95% 38.8-53.2) of district hospita
38 At least 1 cessation medicine
was available at 63% of private pharmacies (n=109) and 2
39 Dietary energy and macronutrient intakes
were available at 7 time points.
40 ndomly assigned residents for whom CMAI data
was available at 8 months.
41 achieved in practice if informative markers
are available at a density of 2 cM.
42 ral steps depending on what cellular factors
are available at a given time point.
43 More detailed residential histories
are available at a higher cost but were not analyzed in
44 biomarkers: accurate, repeated measurements
are available at a reasonable cost, and the biomarker pr
45 lesser financial investment, the latter may
be available at a lower cost.
46 RNA cache of the maternal somatic genome may
be available at a specific stage during development to p
47 HCT services have also
been available at a government-run health centre and at
48 Interactive access to the database
is available at a site called the Globin Gene Server on
49 Only one lever
was available at a time, and each lever was associated w
50 Laboratory prothrombin time results
were available at a median of 78 (62-103) mins.
51 animetry and peak GLS by 2D speckle tracking
were available at admission in 115 of 149 (77%) patients
52 ed on geographical covariates for which data
are available at all study participant locations.
53 education, ensuring that disclosure coaching
is available at all times, and providing emotional suppo
54 A facilitator with EBM teaching experience
was available at all teaching units.
55 am was activated using standard criteria and
was available at all times to assess, treat, and triage
56 Microbial genomes
are available at an ever-increasing pace, as cultivation
57 A free and easy-to-use graphB3 web server
is available at and a standalone tool available at
58 Additional medication
was available at any time to treat occurrences of vomiti
59 A sample dataset
is available at based on images freely available from th
60 nts (61 G-CSF and 58 SOC, respectively), CMR
was available at baseline and 6-month follow-up.
61 a representative marker for thymic function,
was available at baseline and at 12, 24, and 48 weeks po
62 nd for whom reported risk factor information
was available at baseline.
63 Lipid levels
were available at baseline among 1514 patients (73% men;
64 Paired intravascular ultrasound measures
were available at baseline and 1 year in 86 subjects (49
65 cipants for whom evaluable radiograph images
were available at baseline and at least one other timepo
66 Evaluable imaging data
were available at baseline and follow-up for 458 partici
67 All patients for whom assessable MRI scans
were available at baseline and follow-up were included i
68 Sera
were available at baseline and onset of MAC bacteremia f
69 CD4 and CD8 memory and activation markers
were available at baseline and week 48 on most subjects.
70 BMI measurements
were available at baseline in 1982 and eight years later
71 nce manual, vignette, and the package itself
are available at Bioconductor online.
72 RankProd 2.0
is available at Bioconductor and as part of the mzMatch
73 kage containing examples and sample datasets
is available at Bioconductor.
74 is provided as a Bioconductor R Package and
is available at bioconductor.org/packages/pandaR.
75 SPINE, which
is available at bioinfo.mbb.yale.edu/nesg or nesg.org, i
76 Supplementary Materials
are available at Bioinfomatics online.
77 Supplementary data
are available at Bioinformatics online
78 upplementary information: Supplementary data
are available at Bioinformatics online and also at ftp:/
79 Code and documentation
are available at Bioinformatics online.
80 supplementary data
are available at Bioinformatics online.
81 a files for the proposed method and examples
are available at Bioinformatics online.
82 Supplementary materials
are available at Bioinformatics online.
83 Software and supplementary data
are available at Bioinformatics online.
84 UPPLEMENTARY INFORMATION: Supplementary data
are available at Bioinformatics online.
85 Supplemental materials
are available at Bioinformatics Online.
86 Supplementary data
are available at Bioinformatics Online.
87 upplementary information: Supplementary data
are available at Bioinformatics online.
88 Supplementary figures, tables and appendices
are available at Bioinformatics online.
89 y data, including GenBank Accession numbers,
are available at Bioinformatics online.
90 UPPLEMENTARY INFORMATION: Supplementary data
are available at Bioinformatics online.
91 Supplementary Code and figures
are available at Bioinformatics online.
92 Sequences and models
are available at Bioinformatics online.
93 Supplementary Data
are available at Bioinformatics online.
94 : Supplementary data including color figures
are available at Bioinformatics online.
95 A glossary of terms
are available at Bioinformatics online.
96 Supplementary Material
are available at Bioinformatics online.
97 Supplementary data
are available at Bioinformatics online.
98 Supplementary date
are available at Bioinformatics online.
99 harts and example figures for each pipeline,
are available at Bioinformatics online.
100 l the datasets and code used in this article
are available at bioinformatics.cise.ufl.edu/PReach/scal
101 User manual for MorphOT
is available at Bioinformatics online.
102 Supplementary Material
is available at Bioinformatics online.
103 Supplementary material
is available at Bioinformatics online.
104 SUPPLEMENTARY INFORMATION
is available at Bioinformatics online.
105 Supplementary information
is available at Bioinformatics online.
106 Supplementary data
is available at Bioinformatics online.
107 An Appendix to accompany this article
is available at Bioinformatics online.
108 Supplementary file
is available at Bioinformatics online.
109 latest stable version of the web application
is available at biopax.org/validator.
110 two studies in the 10 patients for whom data
was available, at both time points.
111 Acceptable echocardiograms
were available at both time points in 240 subjects (114
112 itional instructions, tutorials and datasets
are available at clue.io/code.
113 d, appropriate therapy for allergic diseases
is available at comparatively low costs at an average of
114 Availability: Software
is available at compbio.cs.brown.edu/software.
115 Software
is available at compbio.cs.brown.edu/software.
116 grammed in R (version 2.7.0) and the package
is available at CRAN 1.
117 R package iJRF
is available at CRAN.
118 Data
were available at delivery for 2356 women, with 2345 liv
119 Sera
were available at diagnosis from most TB patients.
120 cribing choices when comparable alternatives
are available at different costs.
121 d evaluate its cost-effectiveness if WES had
been available at different time points in their diagnos
122 ons of the public draft genome sequence that
were available at different timepoints between April 200
123 ormation, videos, tutorials, and sample data
are available at dmri.slicer.org Cancer Res; 77(21); e10
124 The data, predictions and models
are available at:
drugtargets.insight-centre.org.
125 In the systematic TDM arm, AED plasma levels
were available at each appointment, whereas in the rescu
126 ute walk data from 217 patients in whom data
were available at each visit showed no significant benef
127 Files for masking out these regions
are available at eqtl.uchicago.edu
128 The portal
is available at fabric-cancer.huji.ac.il.
129 termination of patients for whom a parent(s)
was available at four microsatellite marker loci and at
130 The Swissknife modules
are available at ftp://ftp.ebi.ac.uk/pub/software/swissp
131 Results, tables and figures
are available at ftp://ftp.genesecurity.net.
132 upplementary information: Supplementary data
are available at ftp://ftp.ncbi.nih.gov/pub/aravind/UMA/
133 Supplementary data
are available at ftp://ftp.ncbi.nih.gov/pub/galperin/Spo
134 nd a list of statistically significant words
are available at ftp://ftp.ncbi.nih.gov/pub/spouge/paper
135 Supplementary data
are available at ftp://ftp.ncbi.nlm.nih.gov/pub/agarwala
136 Our software (FISHtrees) and two datasets
are available at ftp://ftp.ncbi.nlm.nih.gov/pub/FISHtree
137 on cervical and breast cancer examined here
are available at ftp://ftp.ncbi.nlm.nih.gov/pub/FISHtree
138 l platforms and alignments used in this work
are available at ftp://iole.swmed.edu/pub/SPEL/
139 The algorithms used for NMF and Semi-NMF
are available at ftp://linus.nci.nih.gov/pub/NMF.
140 ge, including MySQL schema creation scripts,
is available at ftp://cggc.agtec.uga.edu/OxfordGrid/.
141 The program
is available at ftp://ftp.ebi.ac.uk/pub/software/swisspr
142 code and documentation including a tutorial
is available at ftp://ftp.ncbi.nih.gov/pub/agarwala/rhma
143 Our C++ program
is available at ftp://ftp.ncbi.nih.gov/pub/spouge/papers
144 The source code for the entire toolkit
is available at ftp://ftp.ncbi.nih.gov/toolbox/ncbi_tool
145 for the interface and an example REST client
is available at ftp://ftp.thegpm.org/repos/gpmdb_rest
146 PCA-PAM50 code
is available at ftp://ftp.wriwindber.org/ .
147 The results of the method
are available at:
ftp://ftp.ebi.ac.uk/pub/contrib/martin
148 The VM
is available at:
ftp://ftp.ebi.ac.uk/pub/databases/chemb
149 le for COBALT, and CDD and PROSITE data used
is available at:
ftp://ftp.ncbi.nlm.nih.gov/pub/agarwala
150 xecutable used to produce the results herein
is available at:
ftp://ftp.ncbi.nlm.nih.gov/pub/agarwala
151 a comprehensive view of yeast interactions,
is available at genecensus.org/intint.
152 The Web-based design tools
are available at GenScript Website (siRNA design center)
153 ailable upon request and DNA microarray data
are available at GEO.
154 compiled binaries (Linux, Mac OS/X, Windows)
are available at github.com/aresio/cupSODA (requires an
155 Data and analysis scripts
are available at github.com/GrossTor/response-logic-proj
156 VariantBam and full documentation
are available at github.com/jwalabroad/VariantBam
157 ackage and application are open-source; code
is available at GitHub.
158 The Decombinator package
is available at github.com/innate2adaptive/Decombinator
159 R code
is available at github.com/james-e-barrett.
160 R code for the proposed methods
is available at github.com/lburns27/Feature-Selection.
161 ARTS is implemented in Perl and
is available at github.com/mmaiensc/ARTS.
162 All code
is available at github.com/pnnl .
163 Code
is available at github.com/ryanrsun/gaynor_sun_GBJ_breas
164 The implementation in R
is available at github.com/sahildshah1/gene-surrounder.
165 The software
is available at github.com/shilab/parEBEN.
166 generate results and figures in this article
is available at github.com/tengfei-emory/scBatch-paper-s
167 The R package
is available at github.com/tengfei-emory/scBatch.
168 GeneCodeq
is available at:
github.com/genecodeq/eval
169 ) for which soluble and assembled structures
are available at high-resolution, providing a template f
170 g migration down to a nutricline), nutrients
are available at higher concentration in darkness.
171 The database
is available at hive.biochemistry.gwu.edu/review/codon .
172 Museum records and historic data can
be available at large scales across multiple decades, an
173 Importantly, dissolved oxygen
is available at least at the lake surface, from equilibr
174 -assimilation is not critical when N-sources
are available at low concentrations, it is important whe
175 ntation of PanEffect and underlying datasets
are available at MaizeGDB.
176 tives to deliver mealtime assistance, whilst
being available at mealtimes to support patients with co
177 The MetaSRA
is available at metasra.biostat.wisc.edu via both a sear
178 The code of DisoFun
is available at mlda.swu.edu.cn/codes.php?name=DisoFun.
179 Out of 96 participants, 94
were available at Month 3, and 88 completed the 6-month
180 Raw data
is available at NCBI's SRA with accession number PRJNA27
181 All vocabularies
are available at no fee for research purposes within an
182 packages, including the Staden Package which
is available at no charge to academic users.
183 Supplementary data
is available at noble.gs.washington.edu/proj/hs
184 It
is available at norm.btm.umed.pl, together with instruct
185 AIscEA
is available at on FigShare as well as { onGitHub.
186 For the proportion for which data
were available at one year we found no significant diffe
187 at patients with CCA are not widespread, and
are available at only a handful of transplant programs.
188 S primers, and raw data used in map assembly
are available at our Web site (genome1.ccc.columbia.edu/
189 porter assay systems, and an online tutorial
are available at our website.
190 Our polony modeling software
is available at our web site.
191 ve genomic and transcriptomics analysis that
are available at PATRIC.
192 Software
is available at phenomics.uky.edu/PhenoCurve.
193 ant placement when a limited vertical height
is available at posterior maxilla.
194 ld be most beneficial, but no such therapies
are available at present.
195 However, no specific antiviral therapy
is available at present.
196 lly produced CeO(2-x) nanoparticle solutions
are available at prices well below those of the Ag/AgCl
197 ve implemented PRIMUS updates in PERL and it
is available at primus.gs.washington.edu.
198 The web server
is available at prodata.swmed.edu/compadre.
199 A public instance
is available at public-registry.jbei.org, where users ca
200 Python packages
are available at PyPI.
201 Additional information about PySB
is available at pysb.org.
202 and (3) an effective, practical intervention
is available at reasonable cost.
203 Access to DIVAA software
is available at RELIC.
204 led description of both its design and usage
are available at research.janelia.org/peng/proj/vano.
205 RNA-Rocket
is available at rnaseq.pathogenportal.org.
206 Source code and documentation
are available at scheet.org.
207 hapLOHseq
is available at scheet.org/software, distributed under a
208 fied and compared (detailed Connections Maps
are available at Science's Signal Transduction Knowledge
209 the murine and Drosophila circadian pathways
are available at Science's Signal Transduction Knowledge
210 Source code
is available at Sourceforge.
211 Code
is available at sourceforge.net/projects/genomezip/
212 The SPARTA software and tutorial
are available at sparta.readthedocs.org.
213 to other diseases where limited size samples
are available at specific points during disease progress
214 The installation instructions and user guide
are available at squiggle.readthedocs.org.
215 approximately one billion times greater than
is available at synchrotron radiation facilities.
216 A variety of tools
are available at TGD for searching the Tetrahymena genom
217 es and proteins involved in lipid metabolism
are available at the 'ARALIP' website.
218 al tau-leap algorithm, software and a manual
are available at the above website.
219 Supplementary data
are available at the Bioinformatics online.
220 All TCGA Open Access tier data
are available at the Broad Institute GDAC Firehose and w
221 ials have been initiated, few mature results
are available at the current time.
222 de, sample input data and usage instructions
are available at the following websites.
223 Algorithm scripts
are available at the Gardner Lab website.
224 he data for all regions except HYPO and SPCO
are available at the Gene Expression Omnibus (GEO) site,
225 as the dictionaries and the reference sets,
are available at the GIFT website.
226 nd sequence similarity searches of the MAGIs
are available at the Iowa State University MAGI web site
227 The tools developed for this analysis
are available at the M-CSA website and allow for user sp
228 Microarray data
are available at the Many Microbe Microarrays Database.
229 or which MLSA, 16S gene, sodA, and gyrB data
are available at the NCBI, showing that gyrB is superior
230 T data from 23 plant species and the results
are available at the PlantGDB website.
231 , this index is only based on variables that
are available at the point of retrieval, and so does not
232 All sequences, assemblies and annotations
are available at the project website via web interfaces
233 Protein Data Bank archive and the tools that
are available at the RCSB website for accessing and expl
234 These channels
are available at the resting potential, are activated by
235 usually does not depend on what other goods
are available at the same time.
236 directions for graphically managing networks
are available at the same website.
237 Examples and documentation
are available at the site below.
238 Two other programs
are available at the site, a program for comparison of m
239 Two other programs
are available at the site-a program for comparison of mu
240 The source code and precompiled binaries
are available at the SPATKIN Web site.
241 The results
are available at the supplementary information site.
242 line, installation instructions and examples
are available at the supplementary web site.
243 sts are secluded in the material, while they
are available at the surface of the Ar + NH3-type cataly
244 (including conserved 3'-compensatory sites),
are available at the TargetScan website, which displays
245 y expression, indicating that if these cells
are available at the time of training, they play an esse
246 Tutorials
are available at the Virtual Cell website and Help is pr
247 Two other programs
are available at the WWW site, a program for comparison
248 samples and, provided the additional markers
are available, at the same time corrects for population
249 often drugs from different companies-have to
be available at the same time when the trial starts.
250 We recommend that a pediatrician
be available at the time of delivery to evaluate for pot
251 he first human dispersal from Africa despite
being available at the time.
252 Additional documentation
is available at the aforementioned GitHub repository.
253 This cDNA clone
is available at the American Type Culture Collection.
254 Our MiPP software program
is available at the Bioconductor website.
255 le of each new gene identified in this study
is available at the Bloomington Stock Center.
256 atabase, and the updated NetMHCpan predictor
is available at the Center for Biological Sequence Analy
257 nted into an R package called ExomeDepth and
is available at the Comprehensive R Archive Network (CRA
258 es 80 y in developed countries, vitamin D(3)
is available at the corner store, and the lifetime risk
259 It
is available at the following four mirrored sites.
260 icting Alzheimer disease, little information
is available at the individual level.
261 A demonstration code in R
is available at the journal website.
262 A maize instance of qTeller
is available at the Maize Genetics and Genomics database
263 since no appropriate statistical methodology
is available at the moment to analyze the data from all
264 The dataset for example
is available at the National Center for Biotechnology In
265 locally and on Amazon elastic compute cloud
is available at the National Institute on Aging Genetics
266 yet no simple, rapid, and robust measurement
is available at the point-of-care to assist clinicians i
267 Because to date no similar information
is available at the protein (phenotype) level, we employ
268 The Phybase package
is available at the R repository.
269 The collection of reconstructed regulons
is available at the RegPrecise database.
270 A web-interface to the program
is available at the same address.
271 ysiologic effect and for whom no information
is available at the time as to their wishes (or those of
272 AraCyc
is available at the tools section of The Arabidopsis Inf
273 OBRC
is available at the University of Pittsburgh's HSLS Web
274 improved when first-order action information
was available at the moment metacognitive decisions abou
275 ion showed that more than 90% of the current
was available at the normal resting potential of these c
276 ion for whom at least 3.5 years of follow-up
was available at the same institution.
277 Azithromycin
was available at the surgical site for a longer period o
278 ents with Covid-19 for whom discharge status
was available at the time of the analysis, a total of 51
279 Eight patients contributing 23 recessions
were available at the 240 +/- 12 months follow-up.
280 Twelve patients (from 20)
were available at the 9-year recall.
281 Data
were available at the district level during 2008-2010 an
282 y data sets for ESSENCE, A to Z, and SYNERGY
were available at the Duke Clinical Research Institute.
283 i-Mental State Examination (MMSE)-type tests
were available at the end of treatment (mean duration: 5
284 samples and the corresponding sputum samples
were available at the Korea University Hospital from Mar
285 -inactivating A-type K+ channels (KA), which
were available at the resting membrane potential, wherea
286 y or late disease, for whom archival samples
were available at the time of antibiotic treatment and a
287 011 and whose cardiovascular autopsy reports
were available at the time of data collection in January
288 radiography, 246 of 328 (75%) of the images
were available at the workstations; it took 1.8 hours fo
289 equencing data and that genotype likelihoods
are available at these sites.
290 MR-Tandem, Python and all necessary packages
are available at this same URL.
291 No well-established drug treatment
is available at this time.
292 ited States for whom frequent plasma samples
were available at time points immediately before, during
293 A web server running ifDEEPre
is available at to provide convenient services to the pu
294 liver of 38 patients for whom a graft biopsy
was available at transplantation.
295 Screening has
been available at two antenatal clinics in Edinburgh, UK
296 A data portal
is available at UALCAN website.
297 Tutorials and video
are available at user guide page.
298 mage, source code and detailed documentation
are available at vat.gersteinlab.org.
299 graphical user interfaces and documentation,
is available at:
warwick.ac.uk/wigwams.
300 Cerebral WMH
was available at year 30 in a subset of participants (n=