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1 bunit alpha, to the sGCbeta1 promoter (CCAAT binding sequence).
2 hering of proteins through an engineered CaM-binding sequence.
3 ys to alternative modifications within their binding sequence.
4 iption factor NF-kappaB with its cognate DNA binding sequence.
5 ied BaMV RNA containing the MS2 coat protein binding sequence.
6 id C-terminus that matches an NRP1 consensus binding sequence.
7 g SAM (OFF state) by encrypting the ribosome binding sequence.
8 rial oriCs generally differ from the optimal binding sequence.
9 n extracted an optimal palindromic 13 bp DSX-binding sequence.
10 son to a functionally derived consensus BvgA-binding sequence.
11 interacts with caveolin-1 via its caveolin-1-binding sequence.
12 n function in the absence of its cognate DNA-binding sequence.
13 PDZ-RhoGEF and frabin identify a novel actin-binding sequence.
14 y as a fail-safe measure to ensure a correct binding sequence.
15 of a cytosine residue flanking the core CSL binding sequence.
16 ds Rps23, Nro1, and Sre1 through a consensus binding sequence.
17 of an oligonucleotide encompassing the CrgA-binding sequence.
18 the Pbx1 promoter segment harboring the CSL-binding sequence.
19 SP, which is similar to the consensus 14-3-3 binding sequence.
20 cific enhancers that lack the consensus MEF2-binding sequence.
21 in p53beta mRNA through the consensus SRSF3-binding sequences.
22 signature sequence, and FAD-binding and NADP-binding sequences.
23 us 8 E2, and prototype foamy virus chromatin-binding sequences.
24 ucts bearing the En1/2 and Lmx1a 3'UTR miRNA-binding sequences.
25 highlighted by the presence of ETS- and AP-1-binding sequences.
26 d weight matrices were built to model SyCrp1 binding sequences.
27 ne for the introduction of discrete integrin-binding sequences.
28 ssociation with evolutionarily conserved Otd-binding sequences.
29 nto CLADE, resulting in some of the tightest binding sequences.
30 th expression of microRNAs targeting triplex binding sequences.
31 ed by other, heterologous phosphatidylserine-binding sequences.
32 20 natural amino acids and identified novel binding sequences.
33 logous to known carbonic anhydrase II (CAII) binding sequences.
34 Pax6-PD, Pax6-PD/HD and Pax6-HD established binding sequences.
35 rve enrichment of the canonical T-domain DNA binding sequence 5'-TCACACCT-3' in the vicinity of most
41 6 is contained within a predicted calmodulin-binding sequence and acetylation of Lys-306 strongly inh
42 leotide that contains a transcription-factor-binding sequence and hydrophobic membrane-disruptive cha
43 de at each position in the consensus p53 DNA binding sequence and identified substitutions tolerated
44 phatase activity, its extreme C-terminal PDZ binding sequence and probably Myosin 5A to control lumen
46 ng sites, suggest how the ordered nucleotide binding sequence and structural changes are dynamically
47 assays validated the identity of the APUM23 binding sequence and supported the location of 3 of the
48 f the tail - the ATP-independent microtubule-binding sequence and the IAK autoinhibitory motif - are
49 f the modification in terminating the primer-binding sequence and thus limiting run-on transcription,
50 5 occupy enhancers that are enriched for ETS-binding sequences and are both functionally important fo
51 By site-directed mutagenesis of SR34 RNA-binding sequences and Arg/Ser-rich (RS) domain, we furth
52 coding PalmtdTomato were tagged with MS2 RNA binding sequences and detected by co-expression of bacte
53 ch revealed enrichment for androgen receptor binding sequences and hypomethylation of these segments
54 d greatly expand the repertoire of HNF4alpha-binding sequences and target genes, thereby identifying
55 TP0262 specifically recognizes the putative binding sequences and that DNA binding is cAMP-dependent
57 of RelA, its association to a DNA consensus binding sequence, and NF-kappaB transcriptional activity
58 pastin also displays an adjacent microtubule binding sequence, and the presence of both ESCRT-III and
59 vivo peak in DSX binding and an optimal DSX-binding sequence, and thus are almost certainly direct D
60 BEND to design both strong and weak histone- binding sequences, and measured the corresponding free e
61 s corresponding to predicted GroEL consensus binding sequences, and that the structure of the bound p
62 e for the introduction of mammalian integrin-binding sequences, and these sequences may be manipulate
63 endogenous Gag polyproteins sharing the same binding sequence; and several proteins involved in cytos
64 Additionally, we identified a conserved Fur binding sequence approximately 130 bp upstream of the tr
66 h position in the required (Gly-Xaa-Yaa)6 Fn-binding sequence are probed here, using model peptides a
69 osphorylated protein containing the integrin binding sequence Arg-Gly-Asp through which it interacts
71 olar cells and interacted with the predicted binding sequences as assessed by electrophoretic mobilit
72 nspired polypeptides with low-complexity RNA-binding sequences as well as an archetypal disordered RN
73 ter revealed the presence of 1 putative STAT-binding sequence at -476 nt, and electrophoretic mobilit
75 ry miRNA transcripts and identified the ICP4-binding sequences at the transcription initiation sites
76 tides that are methylated in their consensus binding sequence, both in in vitro biochemical binding a
77 region, both of which contained multiple Sp1-binding sequences but lacked classic progesterone respon
78 the ability of a peptide with perturbed PDZ-binding sequence, but preserved CaMKIIalpha binding (TAT
79 nd entropic contributions, as expected for a binding sequence, but that D2 gives rise to entropic pen
80 human E2F1 promoter, which lacks a LANA DNA-binding sequence, but this function requires both the N
81 analyses identified putative PLZF and SALL4 binding sequences, but rarely both at shared sites, indi
83 showed that mutations (GT-->TG) in the Reb1p-binding sequence caused an 8.6-fold reduction in beta-ga
84 associates with chromosomes via a chromatin-binding sequence (CBS) located within its C-terminal reg
85 idermal growth factor-like domain and a uPAR-binding sequence comparable with that found in mammalian
86 unique 93 base pair (bp)-long (+/-2 bp) ArgR-binding sequence containing two ARG boxes (39 bp) and re
87 nsitivity resulting from mutations in the Fn-binding sequence could lead to degradation of type I col
88 rofiles, genome-wide location analysis data, binding sequence data, and gene ontology (GO) informatio
89 xpression of the genes containing a RORE DNA binding sequence (DBS), including the Bmal1 gene, thereb
90 also nearly identical to the consensus KLF11 binding sequence defined here by random oligonucleotide
91 .5F proteins containing a scrambled integrin-binding sequence, demonstrating the importance of target
93 ical, and cell-based assays, we show that GR binding sequences, differing by as little as a single ba
94 the CjFur crystal structure rationalize the binding sequence diversity that was uncovered during ChI
95 nosine-5'-triphosphate (ATP) aptamer) or ion-binding sequences (e.g., T-rich Hg(2+) ion-binding domai
96 and Syk, we examined the role of PSGL-1 ERM-binding sequence (EBS) on cell capture, rolling, and sig
97 erts its function on Capsella fruit shape by binding sequence elements of auxin biosynthesis genes to
98 Site-directed mutagenesis of the NKX6.1 core-binding sequence eliminated NKX6.1-mediated activation a
99 s onto SiO2 particles mediated by the silica-binding sequence enables visual detection of environment
101 variants that reside on transcription-factor-binding sequences fall in STF target sequences, suggesti
102 produced a shared dataset of FMRP consensus binding sequences (FCBS), which were reproducibly identi
103 lection to selectively enrich cross-reactive binding sequences, followed by serial selection that enr
104 We report the identification of a novel RNA binding sequence for a nucleolar Arabidopsis PUF protein
105 in depolymerizing factor, which has a common binding sequence for actin and PIP(2), was required for
106 e we report the identification of an optimal binding sequence for BEN by SELEX (systematic evolution
107 ed a constitutive SFFV promoter and NFkappaB binding sequence for bioluminescence and biosensor evalu
110 partate (RGD)-containing sequence (consensus binding sequence for integrins) allowed us to detect a s
114 The polymorphism is located in a consensus binding sequence for the E2F family of transcription fac
115 a putative Na3 site and propose a plausible binding sequence for the substrate and the three Na(+) i
119 NFAIP2, we were unable to correlate specific binding sequences for GR or occupancy patterns with repr
120 ing region of H2a mRNA harbors high affinity binding sequences for Lin28 and that these sequences sti
122 odimer binds to a specific DRE that overlaps binding sequences for peroxisome proliferator-activated
123 protein structures, thermodynamic data, and binding sequences for the corresponding transcription fa
125 ike superfamily of periplasmic peptidoglycan-binding sequences, found in several types of bacterial m
126 AP-ADAP chimera contains the CARMA1 and TAK1 binding sequences from ADAP, expression of the chimera d
128 n vivo screen allows the mapping of putative binding sequences from hundreds of proteins simultaneous
129 the drug on a monolithic column to partition binding sequences from nonbinding sequences using a low-
131 transiently transfected with pDNA containing binding sequences from two of the DNA shuttle proteins,
134 TREs via sequence-specific contacts to a GR-binding sequence (GBS) half-site found embedded within t
135 We predicted a novel and selective integrin-binding sequence, GFPGEN, through the use of computer mo
136 f MTM recognition of DNA, including the FLI1 binding sequence GGA(A/T), are needed to understand how
137 s containing a putative transcription factor binding sequence, GGAANCGGAANY, and a nucleolar gene net
138 ntify a conserved Bub3 interacting and GLE-2-binding sequence (GLEBS) containing ZNF207 (BuGZ) that a
140 cture of human Rae1 in complex with the Gle2-binding sequence (GLEBS) of Nup98 at 1.65 A resolution.
142 f a single terminal nucleotide in one of the binding sequences had little effect on the efficiency of
145 t NTD, or a peptide of the TSP1 calreticulin-binding sequence (hep I) increased both collagen express
146 oxygen-terminated side the consensus peptide-binding sequence (HSXXH) was predicted in silico and con
147 tion of nanocrystal mineralizers through ZnS binding sequences identified by cell surface display and
149 Significantly, disruption of the Pumilio-binding sequence in chemotaxis pathway mRNAs, or misloca
152 C1b region of AC-AplA that resembles the CaM-binding sequence in the C1b region of AC1 in mammals.
154 opts a phosphatidylinositol 4,5-bisphosphate-binding sequence in the cytoskeletal protein gelsolin.
156 re we report the identification of the ATG12 binding sequence in the flexible region of human ATG3 an
161 ranscription factors find their specific DNA binding sequence in the vast expanse of the cell and how
162 e significance of degeneracy within the PpsR binding sequence in vivo, we adapted the chromatin immun
164 of cycB in immature spermatocytes, with Rbp4 binding sequences in a cell type-specific shortened form
165 anner, and the distance between the two BlcR-binding sequences in DNA was critical for BlcR-DNA assoc
168 introduce a new algorithm to identify Hsp70 binding sequences in proteins-ChaperISM-a position-indep
170 the role of the spatial organization of H-NS-binding sequences in the assembly of long-range nucleopr
172 under physiologic conditions with degenerate binding sequences in the presence of other biologically
173 ences that are similar to mitotic chromosome-binding sequences in the transcriptional pioneer protein
174 ides corresponding to naturally occurring Zn-binding sequences in transcription factors have been qua
175 ulfate, and the presence of a NRP1 consensus binding sequence indicate that NRP1 is the binding site
176 neurin ICDs do not contain any intrinsic DNA binding sequences, interaction partners are required to
177 fficient pentamer algorithm by splitting DNA binding sequences into overlapping fragments along with
178 cAMP-response element-binding protein (CREB) binding sequence is present in the Ape1 gene (encodes AP
181 in consequence, the landscape of functional binding sequences is sparse but robust, favoring scenari
184 ibition of NFkappaB interacting with its DNA binding sequences, leading to decreased expression of NF
185 Gly replacements at four sites within the Fn-binding sequence led to decreased Fn binding to denature
188 plex with the neuronal nitric oxide synthase binding sequence), Lys-148 at the C-terminus of CaM form
192 ctin nucleation activity via a cryptic actin-binding sequence near JMY's N terminus, and STRAP inhibi
193 ration of decoy ODNs comprising the NRSF DNA-binding sequence (neuron restrictive silencer element [N
194 s of hPDI are that it contains consensus DNA-binding sequences not only for nearly 500 human transcri
195 a plasmid encoding the secreted calreticulin-binding sequence [NTD (1-35)-EGFP] or a control sequence
196 ent with a peptide derived from the Galpha13-binding sequence of beta1 abolished Galpha13-beta1 inter
197 r by T1 peptide (derived from an alpha6beta1-binding sequence of CCN1) disrupted the positive-feedbac
198 domain and the PSD-95/Discs-large/ZO-1 (PDZ)-binding sequence of DAT, was made membrane-permeable by
199 hemic injury in vivo The minimal syntaxin 1A-binding sequence of Kv2.1 C terminus (C1aB) was first id
200 to neurexins, and mutation of the PDZ-domain binding sequence of neurexin-3beta blocked its transport
203 develop and validate aptamers containing the binding sequence of TF AP-1 (5ECdsAP1), in order to eluc
204 A synthetic peptide that mimics the main FN-binding sequence of TG2 blocks the formation of TG2-FN c
205 ription factor 1 (MyT1-2), and the second Zn-binding sequence of the DNA-binding domain of glucocorti
206 tein created by replacing a natural receptor-binding sequence of the ecotropic Moloney murine leukemi
207 reproduced with a peptide possessing a CD36 binding sequence of TSP-1, while the effects of TSP-1 we
209 nt within putative regulatory regions of the binding sequences of a diverse library of 104 nonredunda
210 structure of calmodulin (CaM) bound with CaM-binding sequences of either the plasma membrane Ca-ATPas
211 nding protein and bends all three tested DNA binding sequences of HMGA2, SELEX1, SELEX2, and PRDII.
212 d cell-type specific regulatory regions with binding sequences of master transcription factors involv
213 d acidic cluster motif reminiscent of ARP2/3-binding sequences of NPFs but fails to facilitate ARP2/3
214 was Ca(2+)-independent, mutations in Ca(2+)-binding sequences of synaptotagmin-1 or synaptotagmin-7-
215 eal that Oct-1 binds to the putative octamer-binding sequences of the dysregulated genes and that thi
216 tely matched both the intronic and exonic U1 binding sequences of the mutated DDC gene could correct
220 effect of the downstream coat gene ribosome binding sequence on maturation gene expression appeared
221 98-602) clusters, forming accessible heparin binding sequences on the TG2 three-dimensional structure
222 nerated by first grafting the murine antigen binding sequences onto suitable human variable light and
224 tion that maximizes the enrichment of target-binding sequences over non-target-binding (i.e., backgro
225 y base pairing occurs between the HIV primer binding sequence (PBS) and the tRNA's 3'-terminus, an im
226 ptidase activity: mutations in its ubiquitin-binding sequences positioned within the ubiquitin-specif
228 h, called DeBooster, to accurately model the binding sequence preferences and identify the correspond
230 2 (CCT2), which resembles the core COP1-WD40-binding sequences present in the substrates of COP1.
231 70) signatures, and deletion of the sigma(E) binding sequence prevented transcriptional activation of
232 nd that peptides containing the RGD integrin-binding sequence produce sustained vasodilatation of rat
233 ndicate that TH has a different co-substrate binding sequence (pterin + O(2) + L-tyr) than PAH (L-phe
234 mutation of a nucleotide in the middle of a binding sequence reduced both the in vitro protein bindi
235 substitutions within the C-terminal receptor-binding sequence, reduced metabolization and improved tu
236 l perturbations of the somatostatin receptor-binding sequence relative to the Re-free disulfide analo
237 of hasS or of the terminator eliminates CovR-binding sequences, relieving repression and increasing r
239 -pre-mRNA interactions, based on intron-exon binding sequences, result in reduced abundance of splice
240 isrupts the mirror image symmetry of the p53-binding sequence, resulting in decreased binding to p53,
241 , we extended EKEKEKE-PPPPC-Am with the cell-binding sequence RGD and demonstrated control over speci
242 as repressing complexes to their cognate DNA-binding sequence(s) (DBS) in the TSLP promoter regulator
244 at the nonreducing end and two contiguous AT-binding sequences separated by a nonsulfated iduronate r
246 y between the two ends of the 23-mer minimal binding sequence, showing an unprecedented influence of
248 Cis-regulatory modules (CRMs) function by binding sequence specific transcription factors, but the
250 anscription of ER stress response genes upon binding sequence specifically to ER stress response enha
251 protein p53 acts as a transcription factor, binding sequence-specifically to defined DNA sites, ther
252 anscription of ER stress response genes upon binding sequence-specifically to ER stress response enha
253 RNA interactions combined with a fluorophore-binding sequence 'Spinach', a GFP-like RNA aptamer for w
255 in domain and significant clustering of SeqA-binding sequences, suggesting a role for SeqA in cluster
256 at CpG dinucleotides flanking the NF-kappaB-binding sequence, supporting that this active DNA demeth
258 evolutionary conservation of Pitx2 consensus binding sequence, TAATCY, on the -20 kb, intronic and co
259 evolutionary conservation of Pitx2 consensus binding sequence, TAATCY, on the -20kb, intronic, and co
260 pn-2) and PlexinA3 (PlexA3) through an Npn-2-binding sequence (TARNER) in the extracellular Ig1 domai
261 pend on residues upstream from the canonical binding sequence that are likely to interact with flexib
262 urexin sequence with an unrelated PDZ-domain binding sequence that does not bind to CASK fully restor
263 aMKIIdelta 3'UTR contains a consensus miR-30 binding sequence that is highly conserved across species
264 ototypic traits of a glycosaminoglycan (GAG) binding sequence that mediates Otx2 binding to PNNs, and
265 The Ctgf promoter contained an Hnf4alpha binding sequence that overlapped with the cis-regulatory
266 selection of targets identified a DACH1 DNA-binding sequence that resembles the FOX (Forkhead box-co
267 rus LANA and prototype foamy virus chromatin-binding sequences that blocked nucleosome association fa
268 at PPE41 contains a characteristic chaperone-binding sequence, the hh motif, which is highly conserve
269 in vivo expression of the TSP1 calreticulin-binding sequence to determine the role of TSP1 in tissue
270 beta-glucosidase (glucocerbrosidase (GCase)) binding sequence to LIMP-2 (lysosomal integral membrane
271 clamp zones recruit proteins bearing a clamp-binding sequence to replication foci, the results highli
272 tion of a DNA fragment containing the kappaB binding sequence to the IkappaBalpha-NF-kappaB complex r
274 to the exponential increase in the number of binding sequences to be evaluated for longer binding sit
275 ndogenous kinase substrates and known Tb(3+)-binding sequences to build a generalizable in silico pip
277 -BB) that were engineered to have a syndecan-binding sequence trigger sustained low-intensity signall
278 The N- and C-domains contain the nucleotide-binding sequences Walker A and Walker B, respectively.
280 eptide incorporating a fibronectin II insert-binding sequence was constructed and found to selectivel
285 is using promoter fusions revealed that this binding sequence was required for Fe-Fur-mediated activa
288 luronan mediated motility (RHAMM) hyaluronan binding sequences, was the most effective inhibitor.
289 tional approximately 10,000 unique HNF4alpha-binding sequences; we also identify new rules for HNF4al
290 ger deletions that extended beyond the TALEN-binding sequences were also detected and were similarly
292 o acids in the alpha-helix of the calmodulin binding sequence, which disrupts kinase binding to calmo
293 Ac-d-Trp-PheNH(2) appeared to be the minimal binding sequence, while Ac-d-Trp-Phe-GlyNH(2) emerged as
294 modified GAL1 promoter containing six Zif268 binding sequences (with single nucleotide spacing) was s
297 ion mixture is to outcompete any nonspecific binding sequences within the initial library, thus allow
298 tted across transmembrane integrins onto RGD binding sequences within the tenth FN type III (10FNIII)
299 t transfection assays, we identified TCF/LEF-binding sequences within two distal enhancers of the Irx
300 at did or did not contain the IE62 consensus binding sequence yielded K(D) (equilibrium dissociation