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2 and applied both to predict the genome-wide binding sites of 1312 TFs available from protein interac
3 the pT1471 phosphate occupies the phosphate-binding site of a canonical pY complex, while Y1473 occu
4 s, Ncd and KIFC3, to determine the potential binding site of a known KIFC1 ATPase inhibitor, AZ82.
5 nown function, one SNP is located in the DNA binding site of a member of the Plasmodium ApiAP2 transc
7 ical probe to primarily occupy the co-factor binding site of a Su(var)3-9, enhancer of a zeste, trith
9 ectroscopy (SRCS) process to determine which binding sites of a molecule preferentially bind to a pla
10 lish firm and specific interactions when the binding sites of a protein receptor have only low affini
11 approach was utilized to map the ssRNA/dsRNA binding sites of a purified recombinant protein and the
12 a glycoconjugate to simultaneously block all binding sites of a target lectin is key to robust inhibi
13 y that binds adjacent to the heparan sulfate binding site of A27, likely affecting ligand binding.
19 umanizing mutations in the vestibule-located binding site of AChBP to improve its suitability as a mo
21 embrane proteins continue to reveal that the binding sites of allosteric modulators are widely distri
24 bly, there is no overlap between the primary binding site of alphaXbeta2 and the binding site of alph
25 ggests that vitamin K1 overlaps at the NADPH binding site of ALR2, which probably shows that vitamin
26 he N terminus of chECL1, suggesting that the binding site of ALV-J gp85 on chNHE1 is probably located
27 immunoprecipitation (iCLIP) to identify the binding sites of ALYREF, an mRNA export adaptor in TREX,
28 ues 22-31 that ultimately broadened the drug-binding site of AM2 S31N inhibitor 4, which spans residu
30 an unnatural amino acid fluorophore into the binding site of an EGFR-specific antibody fragment, resu
32 tors, to identify a component of the odorant-binding site of an OR from the malaria vector, Anopheles
35 e-specific conjugation away from the antigen-binding site of antibody fragments, with a controlled li
36 cells with plasmid carrying mutations in the binding sites of AP4 to Gal-1 promoter resulted in decre
37 nalysis, we identified several P. gingivalis-binding sites of ArcA, which led to the discovery of an
38 n binding site of lidocaine and the external binding site of aryl sulfonamides may have synergistic a
42 two serine residues in H5 at the orthosteric binding site of beta(1)AR, and find that formoterol has
43 as designed to target the Tcf4 G(13)ANDE(17) binding site of beta-catenin, extensive structure-activi
44 t the assignment of three Mg(2+) ions to the binding site of both hGGPPS and yGGPPS greatly improves
46 molecular modeling study demonstrated that A binding sites of BSA play the main role in the interacti
47 ogy model of AtABCC2 and probed the putative binding sites of C3G and GSH through site-directed mutag
49 he binding interface between the tropomyosin-binding site of cardiac leiomodin and the N-terminus of
50 that favor competitive inhibition at the ATP binding site of CDK2 were identified and typically exhib
51 signals were differentially enriched in the binding sites of certain transcription factors, such as
52 nity labeling (PAL) was used to identify the binding site of chroman-4-one-based SIRT2-selective inhi
54 ate-dependent reduction of the dicarboxylate-binding site of complex II (site IIf); (b) pore opening
56 nd is only partially dependent on the glycan-binding site of CRT, which is generally relevant to subs
58 two reducing-end mannoses into the domain A binding site of CV-N than with the nonreducing end unit.
59 the DNA-binding site and the histone/ATPase binding site of CW are located on the opposite sides of
60 -3 is found to disrupt the glycosaminoglycan-binding site of CXCL8 and inhibit the interaction of CXC
64 y or by competition interactions, either for binding sites of dissolved organic carbon or for biotic
65 nd supposed to interact with the orthosteric binding site of dopamine receptors, was actually a negat
67 eport a 2.1- angstrom structure and the drug-binding site of E's transmembrane domain (ETM), determin
70 ment of both salt bridge partners in the ion-binding site of EcNhaA produced an electrogenic variant
72 reference compound (Erlotinib) into the ATP binding site of EGFR-TK domain (PDB ID:1M17) to elucidat
74 Taken together, our data indicate that the binding site of EphA2 on EBV gH/gL is at least in part p
77 and substrate binding pocket that mimick the binding sites of eukaryotic SLC6A18/B0AT3 and SLC6A19/B0
80 onance (NMR)-based studies revealed that the binding site of FHL1 in CHIKV nsP3 HVD overlaps that of
82 terizes the recently disclosed three calcium binding sites of FXIII-A concerning evolution, mutual cr
83 Drugs targeting the orthosteric, primary binding site of G protein-coupled receptors are the most
87 ype-associated SNPs were present in microRNA-binding sites of genes involved in energy metabolism and
89 red that mutations proximal to the substrate binding site of glycosyltransferase 8 domain containing
92 c diversity was detected within the receptor binding site of hemagglutinin of HPAI A/H5N1 viruses, ev
93 Three nitrated tyrosines reside in the heme-binding site of hemopexin, and we found that one, Tyr-19
94 covalently target a reactive cysteine in the binding site of Her2 and were further optimized by means
98 our results suggest that these two essential binding sites of Hsp70s cooperate in protein folding.
101 this article, we describe that the integrin-binding site of human CD40L is predicted to be located i
102 ation in the peptide YYCFQGNQFLR in the heme-binding site of human hemopexin, which was similarly nit
103 ith voltage-shifting mutations and the toxin-binding site of human Na(V)1.7, an attractive pain targe
104 Mutation of the amino acids S873 and T874 binding site of human TRPA1 significantly attenuated cha
107 revealed NLS2 primarily binds the major-NLS binding site of importin alpha, unlike NLS1 that associa
109 sitive hits exclusively when a ligand at the binding site of interest is displaced; it mitigates fals
110 bias in ChIP-seq is challenging because the binding sites of interest tend to be more common in high
111 ingle amino acid difference near the solvent-binding site of iron, and X-ray crystallography revealed
112 to a monoglycopeptide shows that the GalNAc-binding site of its lectin domain is rotated relative to
113 portant for the stabilization (first calcium binding site) of its zymogenic form and the possible mod
114 use intact proteins to show that the lysine-binding site of K2(hPg) is a major determinant of the ac
116 mall-molecule inhibitor targeting the lysine-binding site of KIV-10 can combat the pathophysiological
118 We demonstrate that fSHAPE patterns predict binding sites of known RBPs, such as iron response eleme
120 restingly, all proteins bound at the heparin-binding sites of laminin, including the globular domains
121 In the proposed model, the N-terminal actin-binding site of leiomodin can act as a "swinging gate" a
122 ations of agents targeted to the pore-region binding site of lidocaine and the external binding site
123 ynamic complex, we first mapped the adjacent binding sites of light chains MLC1 and ELC1 on the MyoA
124 ull-down (Chem-CLIP) to identify and map the binding sites of low molecular weight fragments that eng
127 technology such as ChIP-seq, the genome-wide binding sites of many proteins have been profiled under
128 Second, these motifs are enriched at the binding sites of methylation modifying enzymes including
129 ng the receptor inactive state, the putative binding site of Mg(2+) on the MOP receptor, as well as t
131 e simulations shed light on 1) the preferred binding sites of Mg(2+) on the MOP receptor, 2) details
134 and (S)-17b, which bind within the substrate-binding site of MMP-13 and surround the catalytically ac
135 site shows structural similarity to the GTP-binding site of MoaA, suggesting that the viperin substr
136 bout the underlying molecular mechanisms and binding sites of modulatory compounds, we know just the
137 ug-like compounds able to target the antigen-binding sites of most or all patients in a stereotyped s
138 druggable hot spots in the shallow inhibitor binding site of MraY that were not previously appreciate
139 disrupt communication between the nucleotide-binding site of myosin and its lever arm that drives for
140 nt with its repressive function, the genomic binding sites of Myt1l are similar in neurons and fibrob
141 substitutions that are found in the 2nd SIA-binding site of NA proteins of avian-derived IAVs that b
142 for designing proteins that recapitulate the binding sites of natural cytokines, but are otherwise un
143 in the rate of ligand binding to the primary binding site of neuraminidase due to the presence of gly
144 nt, but not of the precursor, bound the VEGF-binding site of neuropilin-1; the C-terminal arginine (R
145 that allosteric agents targeting the heparin-binding site of neutrophil elastase would offer a therap
148 both VEGFR2 and NRP1, including the VEGF164-binding site of NRP1 and the NRP1 cytoplasmic domain (NC
150 logue to occupy both substrate- and cofactor-binding sites of NTMT1, but the bisubstrate analogue wit
152 ed CpGs downstream from SALL4 TSS are within binding sites of octamer-binding transcription factor 4
155 f several cis-regulatory motifs representing binding sites of other TFs, such as ABFs, ERF1, MYB1, LT
158 osteroid pregnenolone sulfate (PES), but the binding site of PES on the NMDAR and the molecular mecha
159 he single canonical conserved 3' UTR miR-290-binding site of Pfn2 or overexpression of the Pfn2 open
160 Here we present the mutations in the ATP-binding site of PI3Kalpha to progressively transform the
162 s feature different regulatory programs: the binding sites of pioneer TFs of FOX family are specifica
168 Furthermore, the structure revealed (i) the binding site of proMPO-processing proconvertase, (ii) th
169 that stolonidiol binds to the phorbol ester binding site of protein kinase C (PKC), induces transloc
170 ional suppressor mutations in the acetyl-CoA binding site of pyruvate carboxylase (PycA) rescued cefu
171 lection of a nucleotide change at the miR172 binding site of Q contributed to subcompact spikes and f
172 ndings support a model in which the relative binding sites of Rad54 and Rdh54 help to define their fu
176 the location of the transition state and the binding site of reaction intermediates are often decoupl
177 otein fingerprinting assay, to map the ssRNA binding sites of recombinant VP6 and the genomic dsRNA b
179 r EDC/GEE, are used together to pinpoint the binding sites of rifamycin SV, doxycycline, and another
180 ions between m5C and micro RNA target sites, binding sites of RNA binding proteins, and N6-methyladen
181 sion and splicing QTLs and are enriched with binding sites of RNA-binding proteins, RNA structure-cha
182 dence that SA acts at or near the ubiquinone binding site of SDH to stimulate activity and contribute
184 its analogues bind to the central substrate-binding site of SERT, stabilize the outward-open conform
185 faces the outside of the protein and is the binding site of several animal toxins, and the palm, a c
187 ific hypomethylated regions are enriched for binding sites of similar transcription factors, suggesti
188 steric binding site of NMS overlaps with the binding site of some allosteric, ectopic and bitopic lig
189 ind significant enrichment for the consensus binding sites of Sox2, Six1 and Gata3-transcription fact
191 an SULT allosteric binding site-the catechin-binding site of SULT1A1 bound to epigallocatechin gallat
192 tructure of an NSAID allosteric site-the MEF-binding site of SULT1A1-is determined using spin-label t
195 In contrast to T1 sigma1, the carbohydrate-binding site of T3 sigma1 is located in the tail domain,
196 expression and genetic variation in microRNA-binding sites of target genes on growth and muscle quali
197 region homologous to the muscarinic receptor-binding site of Tau suggests that MAP2c also may regulat
201 and HS is strong, the conformational heparin binding site of TG2 is not conserved, suggesting that TG
205 en-bonding and hydrophobic groups at the ice-binding site of the antifreeze protein TmAFP of Tenebrio
206 r KCa3.1 over KCa2.3, we first localized the binding site of the benzothiazoles/oxazoles to the CaM-B
207 ogical approaches, we have characterized the binding site of the cellular FHL1 protein in CHIKV HVD a
209 inhibitor that binds selectively to the ATP-binding site of the D2 domain, although both the D1 and
210 To test this hypothesis, we blocked the CD4 binding site of the envelope antigen and compared it to
212 gabazine for binding to (i) the orthosteric binding site of the GABA(A) receptor and (ii) the high-a
215 mutations in close proximity to the receptor-binding site of the HA molecule determined the antigenic
216 the positions were located near the receptor binding site of the HA protein, as they are in the HA pr
218 es, which recognize the conserved coreceptor-binding site of the HIV-1 envelope glycoprotein (Env), c
220 169R mutation located at the second receptor binding site of the HN protein contributed to a complex
221 anges in regions surrounding the orthosteric binding site of the human 5-HT(3A) (h5-HT(3A)) receptor
223 tides to Ral proteins was quantified and the binding site of the lead peptide on RalB was determined
225 ccupancy of GATA-1, OGT, and OGA at the GATA-binding site of the lysosomal protein transmembrane 5 (L
229 himeras and point mutants we have mapped the binding site of the P2X7R-selective antagonist AZ1164537
230 ant in which aspartate residues in the metal-binding site of the polymerase domain were replaced by a
232 g indicated that all the residues of the ATP-binding site of the prototypical kinase PKA, except the
233 he two most common are binding to the ligand-binding site of the receptor and, conversely, binding to
234 by ligands interacting with the orthosteric binding site of the receptor to incorporate concepts of
238 with specific point mutations in the miR-33 binding sites of the Abca1 3'untranslated region, which
239 (a) and an antibody targeting ligand-induced binding sites of the activated GPIIb/IIIa receptor (MBDu
240 tions, i.e., positions were located near the binding sites of the allosteric ligand being assessed.
245 We show that budding yeast Ty3/Gypsy co-opts binding sites of the essential meiotic transcription fac
246 cers active in liver cells, enriched for the binding sites of the FOXA1, FOXA2 and HNF4A transcriptio
247 study demonstrate that the deletions of the binding sites of the G3BP and FXR protein families in th
248 graft survival, estimated AA MMs at peptide-binding sites of the HLA-DRB1 molecule account for an im
249 We used Targeted DamID to identify genomic binding sites of the Hunchback temporal factor in two ne
251 oth BRM and H2A.Z, both factors overlap with binding sites of the light-regulated transcription facto
252 ivate both the glutamate and glycine agonist-binding sites of the N-methyl-d-aspartic acid receptor.
255 in an effort to better understand the metal binding sites of the partially metalated forms of human
257 q, together with NMR analysis of the H3K4me3-binding sites of the PHD fingers from PHF23, KDM5A and B
258 veral Ile methyl groups located in different binding sites of the protein were assigned and used to c
261 nine nucleotides to the canonical nucleotide binding sites of the regulatory Bateman domain induces d
262 llicKZ, this protein associates with two RNA binding sites of the RNase E component of the Pseudomona
263 CRS regions (1) colocalize consistently with binding sites of the same RNA binding proteins (RBPs) or
265 ns of the FGF12-FGFR1c2 and FGF22-FGFR1c2 HS binding sites of the symmetric FGF2-FGFR2-HS2 signal tra
267 ically, NR4A1 is preferentially recruited to binding sites of the transcription factor AP-1, where it
268 ions of active promoters, CpG island shores, binding sites of the transcription factor CTCF and brain
270 X-MS) was used to map the membrane and NDP52 binding sites of the ULK1 complex to unique regions of t
271 r dynamics simulation studies elucidated the binding site of these aniline-based influenza fusion inh
272 understand the role of individual metal-ion binding sites of these domains in the membrane associati
274 l analyses using agonists to map the odorant-binding sites of these receptors have been limited becau
276 GMPK CORE domain distant from the nucleotide-binding site of this domain modulate enzymatic activity
279 clude is Avo3, occludes the FKBP12-rapamycin-binding site of Tor2's FRB domain rendering TORC2 rapamy
280 t a position distinct from the extracellular binding site of TPO, bypasses this inhibition, providing
282 ification marks, chromatin accessibility and binding sites of transcription factors and co-activators
283 th the location of enhancers in CECs and the binding sites of transcription factors in the AP-1/ATF f
285 Also, these regions are enriched for the binding sites of transcriptional repressors (such as CTC
286 ability analysis, we evaluated the potential binding sites of TTP to 3'-untranslated regions (3'-UTR)
291 er rearranges to bridge the C-terminal pS729 binding sites of two BRAFs, which drives the formation o
292 toichiometry of K2hPg/VKK38, with the lysine-binding sites of two K2hPg domains anchored to two regio
293 nts by phage display that bind the back side binding site of Ubc9 and function as SUMO-based Ubc9 inh
296 is of great significance to study the metal-binding site of wild-type alpha-syn (48-53, VVHGVA) and
298 ds to the identification of a potential drug-binding site of ZIKV NS5, which might facilitate the dev
299 stidine-rich motifs, which are the predicted binding site of Zn(2+) in the Zn-deficiency response.
300 he efficiency of the method by mapping metal-binding sites of Zn(7-x)MT species using a bottom-up MS