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1 solates with an MIC within 1 dilution of the breakpoint).
2 ticularly for isolates with results near the breakpoint.
3 rtance of reevaluation of the susceptibility breakpoint.
4 inus 1 doubling dilution of the intermediate breakpoint.
5 l turn propensity of the substituents at the breakpoint.
6 uct concentrations remained similar near the breakpoint.
7 equences homologous to those surrounding the breakpoint.
8 , and 16 mE (27.6%) using the 2019 CLSI disk breakpoints.
9 all analyses, with some evidence of multiple breakpoints.
10 Vs per se or adjust the incorrectly assigned breakpoints.
11 rgeted loci and characterized SVs with exact breakpoints.
12 errors (mE) (46.6%) using the 2019 CLSI disk breakpoints.
13 ermined by the weighted average deviation at breakpoints.
14 Clinical and Laboratory Standards Institute breakpoints.
15 obacteriaceae ciprofloxacin and levofloxacin breakpoints.
16 ructures of multiple isoforms with different breakpoints.
17 ce broth microdilution by use of the revised breakpoints.
18 2 structures surrounding and within deletion breakpoints.
19 breakpoints and not susceptible by the 2019 breakpoints.
20 atures of error-prone repair pathways at the breakpoints.
21 using obsolete Enterobacteriaceae carbapenem breakpoints.
22 e been associated with formation of deletion breakpoints.
23 he exception of P. mirabilis, using CLSI/FDA breakpoints.
24 at the laboratory is up to date with current breakpoints.
25 ate homolog affects positioning of crossover breakpoints.
26 Etest and BMD results across CLSI and EUCAST breakpoints.
27 in the same brains and resolve their precise breakpoints.
28 y unrecognized complex rearrangements at the breakpoints.
29 sion transcripts spanning both the 5' and 3' breakpoints.
30 quently maps split reads to identify precise breakpoints.
31 92.3%, and 95.5%, respectively, by the CLSI breakpoints.
32 he latter forming complex tandem duplication breakpoints.
33 d induced structural rearrangements with PSS breakpoints.
34 it more effectively utilized reads spanning breakpoints.
35 egment copy number, and clone specificity of breakpoints.
36 m, called Pegasus, accurately calls deletion breakpoints.
37 breakpoints and 2016 CLSI M100S 26th edition breakpoints.
38 ttee on Antimicrobial Susceptibility Testing breakpoints.
39 are interpreted using CLSI, FDA, and EUCAST breakpoints.
40 d stress the need for P. aeruginosa-specific breakpoints.
41 tigational status has been removed from CLSI breakpoints.
42 th ceftazidime-avibactam MIC values near the breakpoints.
43 g United States Food and Drug Administration breakpoints.
44 pdate process; 16 (47%) successfully updated breakpoints, 12 (35%) received isolates from the CDC in
46 sumed that their instruments applied current breakpoints, 17 (50%) were uncertain how to change break
47 s having early tears if they tore before the breakpoint (38/55 eyes [69%]), and as late tears if they
50 determine why laboratories failed to update breakpoints and (ii) to provide support for breakpoint u
51 comparable to that of BMD using both Vitek 2 breakpoints and 2016 CLSI M100S 26th edition breakpoints
52 ine chromothripsis events involving up to 65 breakpoints and 60.6 Mb across four chromosomes, further
54 e been shown to frequently harbor additional breakpoints and copy-number imbalances, a complexity pre
55 e phase blocks to determine haplotypes of SV breakpoints and delineate complex breakpoint configurati
56 ntimicrobial Susceptibility Testing (EUCAST) breakpoints and investigational (research-use-only) CLSI
57 ltaneously, preserving uncertainty as to the breakpoints and magnitude of CNVs present in an individu
59 ort to summarize filtered fusions, visualize breakpoints and protein domains by transcript, and plot
61 BD5-specific signal (PSS) sequences at their breakpoints and recurrently inactivated tumor-suppressor
62 Key management variables such as infection breakpoints and required durations of drug interventions
65 vide data to support the reevaluation of CPT breakpoints and to improve agreement across methodologie
67 remove previously established, differing AZI breakpoints and use the ECV as guidance for testing.
68 o kataegis in close proximity to the genomic breakpoints and with the activation of specific signalin
69 producibility of provisional bedaquiline MIC breakpoints and World Health Organization interim critic
70 in turn has led to the creation of clinical breakpoints and, more recently, epidemiological cutoff v
71 ased motivation (decreased progressive ratio breakpoint) and require a longer stimulus length to comp
72 oints, 17 (50%) were uncertain how to change breakpoints, and 10 (29%) lacked resources to perform a
73 ricultural cover associated with DOC and TDN breakpoints, and 15% wetland and 9.5% urban land associa
74 .7%, and 95.5%, respectively, by the Vitek 2 breakpoints, and 93.4%, 92.3%, and 95.5%, respectively,
75 OP2B and XRCC4 are enriched in translocation breakpoints, and map at topologically associating domain
77 However, fusions often occur with intergenic breakpoints, and the role of such fusions has not been c
79 ymes that remain "carbapenem susceptible" at breakpoint; and (4) Pseudomonas aeruginosa that merely l
80 , we established that avian interchromosomal breakpoints appear in the regions of low density of cons
83 cterales and P. aeruginosa, respectively (no breakpoints are currently available for the A. baumannii
86 niques, complex rearrangements with multiple breakpoints are often difficult to resolve, and predicti
87 ervations suggest that detected mosaic event breakpoints are preferentially recovered in genomic regi
90 -ALL have similar expression profile and IGH breakpoints as Nalm6, suggesting a common mechanism to a
95 align on a hydrological relationship with a breakpoint at 2000 mm annual precipitation, where the sy
96 aled the existence of a single recombination breakpoint at the boundary of the non-structural and the
97 cided to set a susceptible-only interpretive breakpoint at the minimum inhibitory concentration of <=
100 ong with strong physical interaction of NAHR breakpoints belonging to the same deletion suggests that
109 topoietic stem cell (HSC) transformed by the breakpoint cluster region (BCR)-abelson (ABL) oncogene a
111 ical domain borders, and frequently occur at breakpoint clusters commonly translocated in cancer.
113 octreotide was associated with an increased breakpoint compared with placebo among ES subjects (322
114 have FDA clearance for the revised (current) breakpoints, compounded by the need for laboratories to
115 ypes of SV breakpoints and delineate complex breakpoint configurations at the resolution of single DN
118 Infection with both viruses resulted in breakpoint-dependent expression of EGFP-tk and ganciclov
121 pins were predicted to form near five shared breakpoints, establishing that the initiating event coul
122 ntimicrobial Susceptibility Testing (EUCAST) breakpoints, Etest MEV performance with clinical (16 MEV
124 and investigational (research-use-only) CLSI breakpoints exist for interpreting cefiderocol susceptib
125 e over whether the daptomycin susceptibility breakpoint for enterococci (ie, minimum inhibitory conce
128 ata generated in this study support a single breakpoint for testing trimethoprim-sulfamethoxazole and
131 inolone antimicrobial susceptibility testing breakpoints for both Enterobacteriaceae and Pseudomonas
133 al Laboratory and Standards Institute (CLSI) breakpoints for E. coli were applied for interpretation.
134 y Standards Institute revised the daptomycin breakpoints for Enterococcus spp. twice in rapid success
135 aceae and Pseudomonas aeruginosa, daptomycin breakpoints for Enterococcus spp., and ceftaroline break
137 boratory Standards Institute (CLSI) M100-S28 breakpoints for S. pseudintermedius/S. schleiferi accura
138 t oxacillin DD tests using the CLSI M100-S28 breakpoints for S. pseudintermedius/S. schleiferi and ox
140 oints for Enterococcus spp., and ceftaroline breakpoints for Staphylococcus aureus Implementation of
141 hanges to the ciprofloxacin and levofloxacin breakpoints for the Enterobacteriaceae and Pseudomonas a
142 r of these regions show unexpectedly high SV breakpoint frequencies given their predicted susceptibil
144 involving gene transcription and nearby SSV breakpoints, global alterations in DNA methylation in th
147 ith different 5' gene partners and BRAF exon breakpoints have been described, but the effects of diff
148 g-resistant Gram-negative bacteria; however, breakpoints have been established only for Escherichia c
149 iation, the presence of large repeats at the breakpoints hinders the analysis of many structural vari
150 ences of oligonucleotides from a chromosomal breakpoint hotspot in the human c-MYC oncogene containin
152 DNA molecule, and can improve detection and breakpoint identification for structural variants (SVs).
154 ear regression crossover model to identify a breakpoint in 13CO2 production (representing the mean re
155 g primers spanning the typical linearization breakpoint in the HBV genome allowed for quantification
156 gate previously reported CNVs, we identified breakpoints in 35 parasite clones with near single base-
159 quences are highly enriched at translocation breakpoints in human cancer genomes, representing an end
160 Both DAAO and IAAO methods provided similar breakpoints in late pregnancy, showing that the DAAO met
162 estigated the occurrence of nonlinearity and breakpoints in relationships between total dissolved nit
163 mains challenging because many variants have breakpoints in repetitive regions of the genome and thus
165 of the prevalence and location of ecological breakpoints in streams, providing watershed managers pot
167 02R)) in order to allocate the recombination breakpoints in these immunologically important proteins
168 ltiple genomic read signals for potential SV breakpoints in whole genome sequencing data and proposes
170 ere provided to aid laboratories in updating breakpoints, including support from technical representa
173 ROS1 fusion oncogene with identical genomic breakpoints, indicating that the nevi arose from a singl
174 iewer gets the input of fusion gene symbols, breakpoint information, or structural variants from whol
179 esence of a somatic structural variant (SSV) breakpoint is recurrently associated with altered expres
181 that the kataegis observed at chromothriptic breakpoints is the consequence of cytosine deamination b
182 susceptibility testing results using current breakpoints, is crucial for clinical care and infection
183 rks, along with the lack of homology between breakpoint joins and the randomness of the order and ori
184 andem duplications or complex gains, exhibit breakpoint junction features reminiscent of replicative
186 eference assembly and the analysis of unique breakpoint junction sequences revealed 63% (57/90) of th
187 PCR) is a traditional approach to obtain CNV breakpoint junction, but this method is inefficient when
188 enous loci followed by the identification of breakpoint junctions within a population, which typicall
189 of 17p11.2, occur up to ~1 Mb away from the breakpoint junctions, and favor C > G transversion subst
190 quency of microhomologies at larger deletion breakpoint junctions, suggesting the involvement of micr
192 d Laboratory Standards Institute (CLSI) SOSA breakpoints led to 2.1% very major errors (VMEs) and 7.1
195 s circulating in Hipposideros bats, with the breakpoint located near 5' and 3' ends of the spike (S)
196 t carrying a heterozygous inversion with one breakpoint located within a topologically associating do
201 The piperacillin/tazobactam non-susceptible breakpoint (MIC > 16 mg/L) best predicted 30-day mortali
202 The SimPlot analysis showed recombination breakpoints near the ORF1/2 junction for all six recombi
204 Standards Institute (CLSI) susceptible-only breakpoint of <=4 mug/mL for daptomycin and enterococci
205 faecium, a susceptible dose-dependent (SDD) breakpoint of <=4 mug/mL was established based on an inc
206 t extinction risk changes around a body mass breakpoint of 0.035 kg, indicating that the lightest and
207 cificity of a bedaquiline MIC susceptibility breakpoint of 0.12 mug/ml for the BMD method and WHO int
208 tion becomes increasingly important when the breakpoint of transmission is approached, and is vital w
209 alis and other enterococcal species, revised breakpoints of <=2 mug/mL-susceptible, 4 mug/mL-intermed
211 ints (BPs) of structural variants (SVs), the breakpoints of fusion genes (FGs) are located in the gen
212 ferentially expressed primate genes near the breakpoints of large (>100 kilobases (kb)) inversions bu
213 Long monomeric A/T tracks are found at the breakpoints of many Plasmodium resistance-conferring CNV
214 alysis and genomic sequencing, we mapped the breakpoints of mitotic recombination events and other ch
217 d, but the effects of different partners and breakpoints on cancer phenotypes and treatment responses
219 d isolates from the CDC in order to validate breakpoints on their systems, and 6 (18%) were planning
222 In the absence of a specific resistance breakpoint our results suggest a MIC of 32 mg/L to be co
224 SH, 10x Genomics Linked-Read sequencing, and breakpoint PCR sequencing to characterize the structural
226 performed two existing algorithms on precise breakpoint prediction, which is clinically important.
227 better hearing outcomes at 12 months, but VL breakpoints predictive of hearing loss were not identifi
229 fied in new susceptible dose-dependent (SDD) breakpoints promulgated by the Clinical and Laboratory S
232 he cat genome, is located in an evolutionary breakpoint region of the giant panda, suggesting that in
233 ative enhancers in the ruminant evolutionary breakpoint regions are highly enriched for DNA sequences
234 genomes, some genes located in evolutionary breakpoint regions are significantly enriched in pathway
235 sion data, we found that genes near ruminant breakpoint regions exhibit more divergent expression pro
239 in BMD and cefoxitin DD tests using the CoNS breakpoints reliably identified mecA-mediated beta-lacta
240 V-diversifies through both recombination and breakpoint repair, while concerted evolution of IR1 is d
243 ng linked-read sequencing, we discover 1,643 breakpoint-resolved unique insertions, in aggregate acco
246 ticolor FISH analysis identified an array of breakpoints responsible for locus- and region-specific t
248 bacteriaceae and Pseudomonas aeruginosa This breakpoint revision was deemed necessary on the basis of
249 well as the potential challenges that these breakpoint revisions are likely to pose for clinical lab
253 kase Cas9(D10A) and guide RNAs targeting the breakpoint sequences, and another to deliver an EGFP-HSV
254 approaches (especially ALN-walking) for CNV breakpoint sequencing and highlights their importance in
255 ed nested PCR walking' (ALN-walking) for CNV breakpoint sequencing in 49 subjects with PMD-associated
257 n a proto-HCN background, the replacement of breakpoint serine with a bulky hydrophobic amino acid is
259 o performs sequence assembly across multiple breakpoints simultaneously, enabling the reconstruction
260 andards Institute (CLSI) has revised several breakpoints since 2010 for bacteria that grow aerobicall
262 ignatures presented by variants containing 3 breakpoints, such as those generated by various copy-pas
263 is encountered with increasing frequency: a breakpoint supported by pharmacokinetic/pharmacodynamic
265 or two-bottle-choice test, progressive ratio breakpoint test, immunohistochemistry, RNAscope, quantit
266 sed the ceftazidime-avibactam disk diffusion breakpoints that provide the lowest discrepancy error ra
267 s interpreted using S. aureus/S. lugdunensis breakpoints, the CA was 97.6% and 96.2%, respectively.
268 egions in the proximity of sequence assembly breakpoints, the majority of which contained complex arr
269 on to developing and updating susceptibility breakpoints, the SC develops and validates new testing m
272 in addition to the inability of the previous breakpoints to detect low-level resistance to this antib
279 a, independent replicates and both inversion breakpoints, we demonstrate that the technique is highly
283 ulase-negative Staphylococcus species (CoNS) breakpoints were highly reliable for detecting mecA-medi
286 ynamic analyses suggesting that the previous breakpoints were too high, in addition to the inability
288 of mean values of two adjacent segments at a breakpoint, where the significant degree of change-point
289 e promoter is often increased with nearby SV breakpoint, which may involve inactivation of repressor
290 dentified novel haplotypes and recombination breakpoints, which could be exploited for further improv
291 ents identified random patterns of clustered breakpoints with copy-number alterations resulting in in
293 s were interpreted according to CLSI E. coli breakpoints, with 49.0 to 85.8% considered susceptible,
294 entified 861 genes mapping at 156 inversions breakpoints, with some showing evidence of differential
295 er enhancer located distally to the deletion breakpoints, with subsequent allele-specific upregulatio
296 ions are observed with at least one deletion breakpoint within unique sequence between the LCR22s.
298 lyzed, identifying depletions of gene fusion breakpoints within coding regions of fused genes as well
300 with BRCT domain mutations harbor BRCA1 gene breakpoints within or adjacent to Alu elements in intron
301 Oxacillin BMD using S. aureus/S. lugdunensis breakpoints yielded the highest VMEs at 17.4% and 90% CA