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1 I intron flank the sequence of the RNA to be circularized.
2 ly minimal modification of the protein to be circularized.
3 target of the DNA damage response and become circularized.
4 w nonproductive pathways in which it becomes circularized.
5 king at the oriT before NBU1 has excised and circularized.
6 each of the six K. lactis chromosomes became circularized.
7 nd Oxford Nanopore data, Circlator correctly circularized 26 of 27 circularizable sequences, comprisi
8 e required for an end-ligation reaction that circularizes a portion of the unintegrated viral cDNA in
9 ur approach is based on the observation that circularizing a barcode sequence can yield error-free k-
11 le elements were not found to be efficiently circularized after transposase-mediated excision, DNA-PK
12 Here it is shown that most survivors have circularized all of their chromosomes, whereas a smaller
13 e to concatemeric consensus (R2C2) method to circularize and amplify the short library molecules.
14 fferent group I introns for their ability to circularize and delineated different features that are i
16 as integrated proviruses but are packaged as circularized and segmented double-stranded DNAs into the
17 a modified deoxyribozyme product that can be circularized and subjected to massive signal amplificati
18 gy in which short target sequences are first circularized and then amplified via rolling-circle ampli
19 s) rAAV genomes become double stranded (ds), circularized, and/or concatemerized concomitant with a s
21 small enough periastron distance that it may circularize at an orbital period as short as a few days
31 which encode a putative homing endonuclease, circularize, but in a way that retains the entire genome
32 and tail-to-tail forms; the concatemers were circularized by homologous or Cre-loxP-mediated recombin
33 on between DNA long-terminal repeats (LTRs), circularized by ligation of the DNA ends or degraded.
35 oduced into one of the fusion mutant strains circularized by means of end-to-end fusions of the mutan
36 llow non-productive pathways, in which it is circularized by recombination between DNA long-terminal
42 We combined chromosome conformation capture, circularized chromosome conformation capture, and relate
46 scription by RNA polymerase III of purified, circularized cloned DNAs encoding genes for 5S rRNA was
47 pecifically on stalled ribosomes and how the circularized complex moves through the ribosome, enablin
50 probes to circularize the -probes and (iii) circularized-dependent qPCR due to sequence information
52 ovirus promoter in the capsid containing Cre-circularized DNA is enhanced over linear DNA, as shown i
53 yltransferase dissociates more slowly from a circularized DNA molecule than from the identical linear
56 fication technique that can use specifically circularized DNA probes for detection of target nucleic
58 veal that chemical ligation of short ODNs on circularized DNA templates through triplex formation is
59 while concatemer processing gave rise to the circularized DNAs that are packaged into nucleocapsids.
62 enesis, including length of introns flanking circularized exons, repetitive elements such as Alu elem
66 n vivo integration assays, we show that this circularized genome can also be efficiently used as a su
67 s with chronic HBV infection and transfected circularized genome pools or dimeric constructs of indiv
69 (-/-) cells remain linear, and the number of circularized genomes is not affected by the mutation, co
70 hermal vent microorganisms, we recovered two circularized genomes of Heimdallarchaeum species that be
71 dings that would likely be difficult without circularizing genomes, including that ribosomal genes ar
73 se P300 and histone deacetylase 1 (HDAC1) to circularized HBV DNA (which resembles covalently closed
75 that long introns generally flank exons that circularize in Drosophila, but the underlying mechanisms
77 les are detected by padlock probes which are circularized in a strictly target dependent ligation rea
86 s in The Cedars, California, and construct a circularized metagenome-assembled genome of a Methanocel
87 by these transduction intermediates included circularized monomer and dimer virus genomes in a head-t
88 trum of end-joined molecules ranging from re-circularized monomer to dimer and higher molecular weigh
89 and poly(A) tail-binding protein (PABP) that circularizes mRNAs, promoting translation and stability.
92 However, ELIC localizes to the rim of large circularized nanodiscs, and structures of ELIC in large
94 (RCA) driven by DNA polymerase can replicate circularized oligonucleotide probes with either linear o
97 ontigs are first reordered, renamed, merged, circularized, or filtered if erroneous or contaminated.
100 chia and 274 non-Escherichia spp.) with 2292 circularized plasmids in total, collected from 19 locati
101 tion; and (iii) qRT-PCR amplification of the circularized PLP after removal of non-circularized templ
103 evidence indicates that eukaryotic mRNAs are circularized, potentially allowing terminating ribosomes
104 for the ligation of a padlock probe, and the circularized probe could in turn be used as a template f
105 of the polymerase during qPCR occurs only in circularized -probes, which quantifies their number that
106 we obtained up to twice as many high-quality circularized prokaryotic metagenome-assembled genomes as
107 spheres (protofibrils), and rings resembling circularized protofibrils (height: ca. 4 nm) were distin
109 nt shuttle vector, we have demonstrated that circularized rAAV intermediates impart episomal persiste
116 a semi-automated method called Jorg to help circularize small bacterial, archaeal, and viral genomes
118 observed ability of hairpin ribozymes with a circularized substrate-binding strand to cleave a circul
123 ws planet-star tidal interactions to rapidly circularize that orbit, decoupling the planets and formi
124 d; (ii) ligation of the hybridized probes to circularize the -probes and (iii) circularized-dependent
131 nsposon from the selected vectors; and (iii) circularizing the ensemble of ORFs containing integrated
132 mini-chromosomes in yeast, where covalently circularizing the ring by crosslinking its three interfa
133 e with the TNF promoter and with each other, circularizing the TNF gene and bringing NFAT-containing
135 sh lifelong, latent infection, herpesviruses circularize their linear, double-stranded, DNA genomes t
136 w this plasmid, and derivatives of it, to re-circularize through a process similar to gap repair.
137 out tetracycline revealed "joint" regions of circularized Tn5386 composed of 6-bp sequences linking d
139 omplementary '-neo-lox' cassette was used to circularize two linear YACs containing genomic DNA from
141 into DF-1 cells, we were able to rescue the circularized unintegrated viral DNA from RSVP simply by
143 f conformation-switching aptamer that can be circularized upon interaction with its protein target, t
145 C. jejuni field isolates were completed and circularized using hybrid sequencing, and a plasmid was
148 produced phosphorylated ssDNA is ready to be circularized via a ligation reaction using a bridging ol
149 two WDR24, four MIOS and two WDR59 subunits circularized via two distinct types of junction involvin
150 mately 10.7-kb positive-sense RNA virus that circularizes via RNA-RNA interactions between sequences
151 s when assayed for incomplete, complete, and circularized viral DNA molecules by quantitative PCR amp
153 mited number of genes are expressed, and the circularized viral genome is maintained as a multicopy e
155 te cleavage products are able to efficiently circularize, we have constructed a series of self-circul
157 d intron sequence (other group I introns are circularized with loss of a short segment of the intron
158 m a primer in the known portion of the gene, circularized with T4 ligase, and then reamplified with P