ライフサイエンスコーパス: clam

1 Comprehensive Lab Animal Monitoring System (CLAMS).

2 tors, and all 20 amino acids required by the clam.

3 ands from each KChIP1 form each shell of the clam.

4 ed surface and encloses one side of the beta-clam.

5 ts is opposite to the closed end of the beta-clam.

6 missible cell derived from a single original clam.

7 phere-based assay for mussels, scallops, and clams.

8 esulted in the bleaching of corals and giant clams.

9 as differentially expressed in intersex male clams.

10 chinoids, but not brachiopods and laternulid clams.

11 cellular symbiosis with insects and deep-sea clams.

12 ependent content of mytilitol in mussels and clams.

13 uding corals, jellyfish, anemones, and giant clams.

14 hemocytes and adductor muscle from leukemic clams.

15 ar activity (E2-C) has also been observed in clams.

16 th similar to those of the early postglacial clams.

17 d scutes in juvenile Tridacna squamosa giant clams.

18 row forward scattering cone similar to giant clams.

19 different as giant squid and microscopic pea clams.

20 ic primary production in the form of lucinid clams.

21 uitinated proteins during heat stress in CWD clams.

22 a serious population decline of soft-shelled clams.

23 S (hen's egg=10, Wheat=1, rice=1, short-neck clam=1) for a total of 22 events (7 emergency outpatient

24 dance and altered the distribution of butter clams across Glacier Bay, with potential cascading conse

25 The in vitro-expressed clam AHR exhibited sequence-specific interactions with a

26 ion analysis using either in vitro-expressed clam AHR or clam cytosolic proteins showed that this AHR

27 Phylogenetic analysis shows that the clam AHR sequence groups within the AHR subfamily of the

28 gen-binding hemoglobins from human, soy, and clam also trap HNO to form adducts which are stable over

29 Cultivated hard clam and eastern oyster nitrogen removal in Greenwich Ba

30 in CTVT, DFTD, and as well as the soft-shell clam and Syrian hamster, can advance studies of tumor bi

31 elices located on opposite sides of the beta-clam and three flexible loops.

32 Clams and biofilm samples were also removed from the con

33 Clams and biofilms accumulated the most nanoparticles on

34 d this leukaemia originated in striped venus clams and later transmitted to clams of the species wart

35 owing the early detection of both Gulf wedge clams and many other filter-feeding IAS, and may be espe

36 ed assays and confirmed its FRAP, ORAC, beta-CLAMS and PCL values to be 79.95 mumol AAE/g DW, 1544 mu

37 nt-cup eyes in limpets, compound eyes in ark clams and pinhole eyes in Nautilus, through to concave m

38 Our results suggest that clams and scallops are unlikely to acclimate to ocean ac

39 mpass enormous disparity, including familiar clams and snails alongside less familiar aculiferans (ch

40 Methylmercury concentrations in clams and snails also declined with productivity, and co

41 sea otters is associated with consumption of clams and soft-sediment prey and is temporally associate

42 Molluscs (snails, octopuses, clams and their relatives) have a great disparity of bod

43 seful for identification of the two kinds of clams and to assess their nutritional characteristics.

44 erytreae were examined using qPCR for CLaf, CLam, and CLas, but none of them tested positive for any

45 for some invertebrates such as sea urchins, clams, and barnacles.

46 carbons were measured in mangrove sediments, clams, and caged mussels.

47 e cancers, and these affect dogs, soft-shell clams, and Tasmanian devils, respectively.

48 These clam archives can increase our understanding of the ther

49 her the increase in thermal tolerance in CWD clams are due to genetic adaptation and/or phenotypic pl

50 as the complex interactions among humans and clams are useful for modern marine resource management.

51 Filter feeders, like mussels and clams, are suitable bioindicators of environmental pollu

52 hat encode novel compounds, while the third, CLAMS, automates the isolation of their corresponding pr

53 amelea gallina of indigenous origin, whereas clams breeding is supported almost entirely by the Tapes

54 The clam Calyptogena magnifica lives at abyssal depths in as

55 Here we describe CLAM-Cap-seq, a method for transcriptome-wide mapping an

56 In bivalves, giant clams (Cardiidae: Tridacninae) gape open to irradiate th

57 We show that the predicted cytochrome P450 ClaM catalyzes the dimerization of nataloe-emodin to cla

58 onoclonal antibodies raised against isolated clam centrosomes, we have identified a novel 135-kD cent

59 comprehensive lab animal monitoring system (CLAMS) chambers throughout pregnancy.

60 We present CLAM (CLIP-seq Analysis of Multi-mapped reads).

61 uppressor domain (SD) and reveal correlated 'clam closure' dynamics of IBC with IP(3)-binding, comple

62 mples evaluated (mussels, scallops, oysters, clams, cockles) nor interference from other shellfish to

63 Measurements of clams collected in active clam gardens and deposited in

64 ta californiensis and an invasive freshwater clam Corbicula fluminea to reduce concentrations of the

65 sel Anodonta californiensis and the invasive clam Corbicula fluminea.

66 zebra mussel Dreissena polymorpha and Asian clam Corbicula fluminea.

67 degrees C per day) were assessed in invasive clams Corbicula fluminea from two pristine populations a

68 zoan ciliate infestation of a larval geoduck clam culture in a commercial hatchery to investigate the

69 using either in vitro-expressed clam AHR or clam cytosolic proteins showed that this AHR homologue b

70 al sea otter expansion, we found that butter clam density was structured by an environmental gradient

71 Vesicomyid clams depend entirely on sulfur-oxidizing endosymbiotic

72 3-dependent mechanism may be involved in the clam disease.

73 nistic differential equation model of butter clam dynamics that combined both environmental drivers o

74 0, which shares 61% amino acid identity with clam E2-C and can substitute for clam E2-C in vitro.

75 Dominant-negative clam E2-C and human UbcH10 proteins, created by altering

76 r, the molecular identity of Xenopus UBCx or clam E2-C has not been established.

77 entity with clam E2-C and can substitute for clam E2-C in vitro.

78 al structure of the cyclin-specific Ubc from clam, E2-C, determined at 2.0 A resolution.

79 In clam eggs, this process is catalyzed by a cyclin-selecti

80 following fertilization of echinoid and also clam eggs.

81 Future characterization of the ClaM enzyme should facilitate engineering the biosynthes

82 echanism for symbionts in hospite with giant clams exposed to high temperatures, and such modulation

83 A 21-year strontium/calcium record of two clams from 9 degrees50'N on the East Pacific Rise captur

84 egrees C) lethal temperature thresholds than clams from the pristine areas.

85 a surface temperature, and the presence of a clam garden wall, increased clam growth throughout the H

86 lations and after 3.5 ka, began constructing clam gardens (intertidal rock-walled terraces).

87 Measurements of clams collected in active clam gardens and deposited in middens suggest that clam

88 ardens and deposited in middens suggest that clam gardens as well as other mariculture activities enh

89 Several species of the Asian clam genus Corbicula reproduce via androgenesis.

90 he presence of a clam garden wall, increased clam growth throughout the Holocene.

91 Sea otter exploitation of productive butter clam habitat substantially reduced the abundance and alt

92 CWD clams had considerably higher (by ~8-12 degrees C) letha

93 mical contamination as well as in authorized clam harvesting areas.

94 ice lagoon sites subjected to prohibition of clam harvesting because of chemical contamination as wel

95 Clams have long been a fisheries and aquaculture sector

96 nterface of mammalian Hbs or the contacts in clam Hb where the E and F helices form the interface.

97 s are complexed in the cytoplasm of leukemic clam hemocytes (and not in normal hemocytes).

98 Based on these data, we introduce leukemic clam hemocytes as novel and easily accessible, in vivo a

99 We show that leukemic clam hemocytes have an intact p53 pathway, and that main

100 In addition, treatment of leukemic clam hemocytes with MKT-077, a cationic inhibitor of mor

101 and truncated variant, 620-fold above normal clam hemocytes) of human mortalin, an Hsp70 family prote

102 In untreated leukemic clam hemocytes, p53 is complexed throughout the cytoplas

103 In leukemic clam hemocytes, wild-type p53 and mortalin proteins co-l

104 ts localization in the cytoplasm of leukemic clam hemocytes.

105 of p53, and results in apoptosis of leukemic clam hemocytes.

106 toplasm with overexpressed variants for both clam homologues (full-length variant, 1,200-fold and tru

107 These clams host chemoautotrophic bacterial symbionts in their

108 ological and transcriptomic responses of the clam hosts and their photosynthetically active symbionts

109 These estimates are conservative; removal by clams in Connecticut, oysters and clams in New York, and

110 removal by clams in Connecticut, oysters and clams in New York, and denitrification are not included.

111 Therefore, Asian hard clam is an excellent source of several nutrients, which

112 ic studies have proposed that the intertidal clam, Lasaea, is one of a few animal groups with asexual

113 The Antarctic clam Laternula elliptica lives almost permanently below

114 molluscan biomineralization using Antarctic clam (Laternula elliptica) mantle gene expression data p

115 study used a tractable model, the Antarctic clam, Laternula elliptica, which can live for 36 years,

116 Soft shell clam leukemia provides excellent in vivo and in vitro mo

117 s suum and the other from the sulfide-fixing clam Lucina pectinata, are compared with respect to conf

118 strated that the geographic origin of Manila clam may be more accurately determined basing on microbi

119 egulation by human MDM2, suggesting that the clam may have an mdm2 homologue.

120 Further studies of these gene products in clams may reveal p53/p73-related molecular mechanisms th

121 he effects of fish meal (FM) substitution by clam meal (CM, at 10%, 20% and 30% of the diet) on the g

122 The single cysteine (Cys 51) in isolated clam (Mercenaria) RLC was labeled with an indanedione sp

123 uding foot, mantle and viscera of Asian hard clam (Meretrix lusoria) harvested from the coast of Anda

124 congruent with the host genealogy, based on clam mitochondrial cytochrome oxidase subunit I and larg

125 Perutz proposed a version of the clam model in which the distal histidine swings out of t

126 formation generally consistent with the beta-clam motif described for members of the lipid-binding pr

127 ation of human L-FABP shows the typical beta-clam motif.

128 onal fold that includes an antiparallel beta-clam motif.

129 , mature cordgrass, juvenile northern quahog clam, mud snails, and grass shrimp.

130 for trace elements determination in oyster, clam, mussel, and thick lucine samples.

131 on resident marine calcifiers (e.g. oysters, clams, mussels).

132 In nature the soft shell clam Mya arenaria develops a fatal neoplasm that shares

133 th Atlantic, most prominently the soft shell clam Mya arenaria, are afflicted with an epidemic transm

134 p) S19 from a marine bivalve, the soft-shell clam (Mya arenaria), and we have examined its pattern of

135 utative p53 gene (Map53) from the soft-shell clam (Mya arenaria).

136 n tissues from normal and leukemic softshell clams (Mya arenaria).

137 opy number in neoplastic cells of soft-shell clams (Mya arenaria).

138 In nature, the soft shell clam, Mya arenaria, develops a fatal blood cancer in whi

139 AHR homologue was cloned from the soft-shell clam, Mya arenaria.

140 l-scyllo-inositol (mytilitol) in mussels and clams (Mytilus and Ruditapes spp., respectively) purchas

141 striped venus clams and later transmitted to clams of the species warty venus, in which it survives a

142 biquitination and destruction of cyclin B in clam oocyte extracts.

143 Surf clam oocytes are an attractive model to approach this pr

144 In the germinal vesicles of clam oocytes at prophase of meiosis I, p62 binds to the

145 Previously, we reported that in clam oocytes, cytoplasmic polyadenylation element-bindin

146 rt the purification and cloning of E2-C from clam oocytes.

147 ally to one another, thus exhibiting a "beta-clam" or "beta-sandwich" fold: beta-sheet 1 is comprised

148 Core sequence of the predicted clam p53 (Map53) and p73 (Map73) proteins is virtually i

149 Predicted sequences for human and clam p53 proteins exhibit conservation in key domains.

150 The levels of clam PABP are constant in early embryogenesis, although

151 tate-methanol extract of the venerid bivalve clam Paphia malabarica led to isolation of three unprece

152 d consisting of phytoplankton/filter feeding clam, periphyton/grazing snail, and leaves/shredding amp

153 ned attention multiple instance learning (or CLAM) pipeline.

154 1.2 (Chironomidae larvae), 107 +/- 4.5 (pea clams Pisidium sp.), 131 +/- 105 (three-spined stickleba

155 al evidence that it is possible to trace the clam place of origin at high spatial resolution.

156 ime baselines that more accurately represent clam population variability and allow us to assess magni

157 , humans took increasing advantage of robust clam populations and after 3.5 ka, began constructing cl

158 hark prey and, via a trophic cascade, caused clam populations to crash.

159 Because giant clams possess distinctive ectosymbiotic features, they r

160 Giant clams produce massive calcified shells with important bi

161 ell as other mariculture activities enhanced clam production despite increased harvesting pressure.

162 netic tree; Figure 1); Bivalvia (mussels and clams), protected by shells and practically immobile; an

163 aggregation of polyglutamine, a mutant beta-clam protein, and protein L, we determined parameter val

164 egation of a slow-folding mutant of the beta-clam protein, cellular retinoic acid-binding protein I (

165 Clam proteins have either a short (Map53) or long (Map73

166 lams Venerupis philippinarum, and littleneck clams Protothaca staminea, Enteroctopus dofleini solved

167 CLAM provides a useful tool to discover novel protein-RN

168 ations effectively controlled the Gulf wedge clam Rangia cuneata, an IAS currently spreading rapidly

169 paleoecological, archaeological, and modern clam records to explore the relationship between humans

170 CLAM recovered a large number of novel RNA regulatory si

171 gical changes at the molecular level) in the clams' responses to environmental change.

172 Examination of hemolymph of diseased clams revealed high levels of reverse transcriptase acti

173 As a test case, we used the Manila clam Ruditapes philippinarum, a bivalve mollusk of high

174 Globally, the Manila clam (Ruditapes philippinarum) stands as the second most

175 uced by bacteria harbored in soft tissues of clams (Ruditapes philippinarum), collected in high Hg po

176 Just one clam sample showed the presence of oxytetracycline at a

177 idelines, and applied it to 50 mussel and 50 clam samples derived from various Food and Agricultural

178 Mussel, oyster, and clam samples showed the highest As content (>= 23 mug g(

179 ey interaction between sea otters and butter clams Saxidomus gigantea, one of the dominant large biva

180 e the relationship between humans and butter clams (Saxidomus gigantea) throughout the Holocene in th

181 the dimeric hemoglobin (HbI) from the blood clam Scapharca inaequivalvis is mediated primarily by te

182 ing in the dimeric hemoglobin from the blood clam Scapharca inaequivalvis results primarily from tert

183 The complex reveals a clam-shaped dimeric assembly.

184 three beta-strands on the bottom half of the clam shell and the establishment of the native hydrogen

185 These sugars are known to crystallize in a clam shell conformation.

186 seawater temperature is known to alter giant clam shell structure, no study has examined the effects

187 s B-G, mostly located on the top half of the clam shell structure, propagate from this hydrophobic co

188 inding mode essentially within the same beta-clam shell structure.

189 ding protein family, members of which have a clam shell type of motif formed by two five-stranded bet

190 e) domain and a large helical domain form a "clam shell" that buries the GDP molecule.

191 protein activation may involve "opening the clam shell" to facilitate GDP dissociation.

192 stin-2 results also suggest that there is no clam shell-like closure of the N- and C-domains and that

193 We find that, although barrel and clam-shell drops have different shapes, these conditions

194 nstance, it is unclear under what conditions clam-shell drops would move from the tip towards the roo

195 circular dichroism, to demonstrate that the clam-shell model is correct.

196 vironment, water drops with either barrel or clam-shell shapes are capable of self-running on conical

197 ly unchanged, contrary to expectations of a "clam-shell" model.

198 model of adsorption that involves an unusual clam-shell-like unhinging of the protein at an interface

199 nd geochemical signatures of aragonite giant clam shells Tridacna squamosa from high and low turbid r

200 levated pCO(2) on element/Ca ratios in giant clam shells, with significantly increased [(137)Ba]/[(40

201 thic suspension feeder Rangia cuneata (wedge clam) showed seasonal avoidance of toxin ingestion due t

202 ment, sea grass, microbes, biofilms, snails, clams, shrimp and fish.

203 ceans are represented by fairy, tadpole, and clam shrimps (Anostraca, Notostraca, Laevicaudata, Spini

204 up or crown-group Anostraca, Notostraca, and clam shrimps or Cladoceromorpha [8-10], which differ mor

205 analyzed the MSTN gene (Sc-MSTN) from razor clam (Sinonovacula constricta).

206 We compare butter clam size and growth patterns from different temporal, e

207 trial activities are associated with reduced clam size and growth similar to those of the early postg

208 Butter clam size and growth were restricted in early postglacia

209 coexistence of haplotypes from two different clam species.

210 ABP in the early developmental stages of the clam Spisula solidissima.

211 library of RNAs extracted from isolated surf clam (Spisula solidissima) centrosomes, we describe a gr

212 solated centrosomes from oocytes of the surf clam, Spisula solidissima, and purified from them a uniq

213 cently been confirmed in oocytes of the surf clam, Spisula solidissima.

214 ation, is present in each oocyte of the surf clam, Spisula solidissima.

215 e for the future molecular breeding of razor clam strains.

216 th MeHg concentrations in benthic snails and clams, supporting that riparian produced MeHg was assimi

217 Bayesian statistical framework and fit it to clam survey data from 43 intertidal and subtidal sites a

218 ighlighted the important role of the lucinid clam symbiosis in maintaining the health and productivit

219 forward-scattering behavior of the Tridacnid clam system are reported, which presents the first geome

220 erm memory, decreased ambulatory activity in CLAMS testing, and altered prepulse inhibition to startl

221 tion turned out to be significantly lower in clams than in mussels (p-value < 0.001), with Danish mus

222 uence of pCO(2) on shell mineralogy in giant clams than previously recognized.

223 omyidae (Bivalvia: Mollusca) are a family of clams that form symbioses with chemosynthetic gamma-prot

224 whole-genome sequencing in eight warty venus clams that were diagnosed with HN, from two sampling poi

225 heir native range, in the case of the Manila clam this has not resulted in new invasion waves in the

226 the concentrations of target contaminants in clam tissues were minimal.

227 By applying CLAM to the subtyping of renal cell carcinoma and non-sm

228 nal study uses 2017 and 2018 Medicare Part D clams to compare the amount Medicare pays for common gen

229 cid-binding protein (I-FABP) exhibits a beta-clam topology comprised of two five-stranded antiparalle

230 domain is not a required element of the beta-clam topology of I-FABP.

231 netic structure with the reported history of clam transfers across continents, and no evidence of rel

232 prisms, propellers, 2-solenoid, super-roll, clam, trefoil and box are not widely distributed and wer

233 0.006 (2 SD), and two specimens of the giant clam Tridacna gigas, 0.508 +/- 0.007 (2 SD) and 0.509 +/

234 CLAM uses an expectation-maximization algorithm to assig

235 rained-attention multiple-instance learning (CLAM), uses attention-based learning to identify subregi

236 , freshwater mussels (Unionoida), and marine clams (Veneroida) is the only known exception to the gen

237 en prey of mussels Mytilus trossulus, Manila clams Venerupis philippinarum, and littleneck clams Prot

238 duals representing eight species of deep-sea clams (Vesicomyidae) were examined for variation consist

239 Consuming a diet rich in clams was also associated with increased exposure risk.

240 High thermal tolerance of CWD clams was associated with overexpression of heat shock p

241 To demonstrate the utility of CLAM, we applied it to a wide range of public CLIP-seq/R

242 symbionts over a 65 day experiment in which clams were exposed to either normal or environmentally r

243 % of annual inputs, which would be higher if clams were included.

244 Buk2 folds like an open-shelled clam, with each of the two domains representing one of t