ライフサイエンスコーパス: concatenated

1 m strains when a minimum of six enzymes were concatenated.

2 d using Discrete Wavelet Transform (DWT) and concatenated.

3 Here, a maximum-likelihood analysis of a concatenated 10-locus data set, as well as minimize-deep

4 To perform phylogenomic reconstruction, we concatenated 15,972 ortholog groups into a supermatrix o

5 netic trees are incongruent and that 28S and concatenated 28S+18S rRNA phylogenies reflect evolutiona

6 d multiple substitutions per site within the concatenated (945 bp) nucleotide dataset, implying that

7 domains (protein islands), and these domains concatenated after T cell activation.

8 columns of the more unique aligner among the concatenated aligners.

9 In a concatenated alignment of all six genes, the dN/dS ratio

10 o perform a maximum likelihood analysis of a concatenated alignment of conserved, single-copy genes.

11 Robust phylogenetic trees constructed using concatenated alignment of these genes placed M. lepromat

12 ogenies from these genes separately and as a concatenated alignment with and without small subunit (S

13 phyloGAN takes as input a concatenated alignment, or a set of gene alignments, and

14 First, we concatenated alignments of all genes into a single align

15 dicate that, in both trees constructed using concatenated alignments of ribosomal proteins and trees

16 logy tests, the same methods were applied to concatenated alignments of subunits of eight conserved m

17 Phylogenetic trees for both single-gene and concatenated alignments were evaluated thoroughly by max

18 rees to the NCBI taxonomy, to trees based on concatenated alignments, and to trees produced by other

19 alpha-subunit and no mutation in the second (concatenated) alpha-subunit or an S4S5 point mutation in

20 bility method to individual agonist sites in concatenated (alpha4beta2)2alpha4 receptors, we determin

21 ological profiles were indistinguishable for concatenated (alpha7)5-nAChRs or for homomeric alpha7-nA

22 d a mutual information-based analysis of the concatenated amino acid sequences and identified an exte

23 We included *BEAST, concatenated analysis and several 'summary methods': BUC

24 The trees resulting from concatenated analysis are more similar among each other

25 The extracted feature vectors are concatenated and further fed into the biLSTM network, fo

26 ed to most of the orthologous clusters, both concatenated and individual, grouped the fly with humans

27 diary forecasts from these base learners are concatenated and input into the FFNN, which assigns opti

28 lock device was developed using enzyme-based concatenated AND logic gates resulting in the implicatio

29 ucted from these regions, some of which were concatenated and polymerized to enhance their immunogeni

30 The features from both tracks are concatenated and processed through Triplet Attention for

31 tive control, random forest was performed on concatenated and separated data types.

32 These tags are PCR-amplified, purified, concatenated, and then cloned and sequenced.

33 A concatenated approach to incorporate bilateral severity

34 twork, termed PASSION, which is based on the concatenated artificial neural network (ANN) and hybrid

35 ary statistics that can straightforwardly be concatenated as a spreadsheet-like document for large-sc

36 stage, four smaller models (ResNets) use the concatenated B-scan-wise output from the first stage to

37 r by a Grotthuss-type proton wire made up of concatenated benzimidazoles that form a hydrogen-bonded

38 pe II beta-turns and the resulting series of concatenated beta-turns are thought to form a beta-spira

39 ltidomain MTs (md-MTs) consisting of several concatenated beta3 domains and a single C-terminal beta1

40 With the use of concatenated bilateral severity levels for AMD, decrease

41 ght cannot transactivate via out of context, concatenated binding sites.

42 t outer error-correcting code, indicate that concatenated bosonic codes can be a compelling model for

43 aviour is built from action modules that are concatenated by the brain into sequences(1,2).

44 ed expression a gfp reporter controlled by a concatenated C subelement oligonucleotide in daf-3 mutan

45 Expression of a concatenated cDNA encoding two or four linked subunits p

46 We expressed eight concatenated cDNAs in human embryonic kidney cells, whic

47 nit induced the same rapid deactivation of a concatenated channel as that observed for homotetrameric

48 bination of synthetic amino acid analogs and concatenated channel subunits we establish two H-bonds n

49 Multimeric GIRK constructs with several concatenated channel subunits were expressed in Xenopus

50 In this study, the concatenated chromosomal sequences from the three strain

51 From concatenated chromosomes to polyploidization, large-scal

52 rneurons in their target ganglion and form a concatenated circuit that links neighboring segmental ga

53 Individual tags are linked into ditags, concatenated, cloned and sequenced.

54 -robust and short composite operations named ConCatenated Composite Pulses (CCCPs), developed as high

55 ials include full proteins in novel vectors, concatenated conserved protein regions, and polyvalent s

56 analyses of GABA(A) receptor mutations using concatenated constructs can identify receptors with an i

57 Three concatenated copies of the 10-bp Inr and its immediate 3

58 we establish a reference tree by evaluating concatenated core gene supertrees and whole genome gene

59 Phylogenetic analysis based on 397 concatenated core genes distinguished A. aphrophilus and

60 Concatenated core-gene phylogeny clusters all but one of

61 simony analysis were generated for combined (concatenated) cox2 and ITS-2 sequences from 167 individu

62 us lifecycles of DNA nanotubes (DNTs) by two concatenated CRNs using different thermodynamic principl

63 The unusual concatenated crystal structure of PrxIII consisting of t

64 ly used a priori approaches for partitioning concatenated data in maximum likelihood analyses, by gen

65 The concatenated data set is also used to estimate dates of

66 e analytical insight provided by MVSA of the concatenated data set was not obtained when either polar

67 MVSA of concatenated data sets provides results that are intuiti

68 Using a seven-gene concatenated dataset (nuclear EF2, LSU and SSU rRNAs, mi

69 d Bayesian inference (BI) methods based on a concatenated dataset of plastid-encoded rpoB, rpoC1 and

70 tion of time with features characteristic of concatenated DDMs and that this population signal can be

71 Protelomerase resolves a concatenated dimer of chromosomes as the last step of ch

72 ng perylene bisimide macrocyclic dimer and a concatenated dimer-dimer ring from dynamic self-assembly

73 haviors of both the monocyclic dimer and the concatenated dimer-dimer ring were modeled with the NWCh

74 Importantly, IP3R channels formed from concatenated dimers were fully functional as indicated b

75 e proteins directly in cells, as well as the concatenated discovery of small molecule chemical probes

76 henotype, and that recombination between the concatenated DNA and endogenous DNA was a gene replaceme

77 The concatenated DNA fragments of defined length, orientatio

78 ng construction of a core phylogeny based on concatenated DNA sequences.

79 The valve, which is made from seven concatenated DNA strands, can bind a specific ligand and

80 We develop concatenated double-resonance sequences that identify sp

81 technologies cannot be directly combined or concatenated, due to the innate difference in the data,

82 We develop the Oncogene Concatenated Enriched Amplicon Nanopore Sequencing (OCEA

83 ic analyses were performed to assess whether concatenated enzyme methods can cluster closely related

84 pectra which are then combined into a single concatenated file and submitted for peptide identificati

85 n2 and lin4, monocyclic complement cyc2, and concatenated foldable rings cat4.

86 Linear, cyclic, and concatenated foldamers reveal that photoabsorption and e

87 quency (VAFs) are amplified and subsequently concatenated for Nanopore Sequencing.

88 (sNN), where the cell and drug features are concatenated for the input layer.

89 In the 3D protocol, six concatenated fractions from the first dimension (C18, he

90 rotocol used a high pH-low pH scheme with 21 concatenated fractions.

91 RF1a fragment (940 nucleotides) and a 4.2 kb concatenated fragment were very similar to the MERS-CoV

92 A single B-scan is concatenated from 330 A-lines captured during a 360 degr

93 Concatenated GABA+ micronetworks of AC --> AC and AC -->

94 ase (Fluc) under the regulatory control of a concatenated Gal4 promoter (Tg(G4F(+/-))).

95 riendly software package to rapidly generate concatenated gene alignments for phylogenetic analysis.

96 presents an efficient method for generating concatenated gene alignments for phylogenetic analysis.

97 ata driven approach and efficiently generate concatenated gene alignments for very large genomic data

98 Concatenated gene constructs were used to express precis

99 ian analysis can be excessively liberal when concatenated gene sequences are used, whereas bootstrap

100 o 16.8 Mb and inferred topologies using both concatenated gene tree approaches and species tree metho

101 pecies tree whose mode is congruent with the concatenated gene tree but can do so with less than half

102 ts consisting of single or a small number of concatenated genes have a significant probability of sup

103 on the use of single marker genes or sets of concatenated genes to generate a framework for the delin

104 contrast, analyses of the entire data set of concatenated genes yielded a single, fully resolved spec

105 ees were computed for both whole genomes and concatenated HA/NA sequences.

106 ts, or concatenate haplotype segments if the concatenated haplotype segments are sufficiently support

107 le) dimensions, and have not been applied to concatenated helices with more than two segments.

108 Analyses of concatenated hemocyanin sequences resolved deep nodes in

109 631C), the presence of a single subunit in a concatenated hERG1 tetramer disrupted gating to the same

110 on gating and potency of channel block using concatenated hERG1 tetramers containing a variable numbe

111 Concatenated hERG1 tetramers containing four wild-type s

112 er diode (FMMBD), which consists of multiple concatenated heterobarriers.

113 bution of individual subtypes within defined concatenated heterotetramers to the shaping of Ca(2+) si

114 robing the mechanisms of channel gating with concatenated heterotypic channels should be interpreted

115 , by comparing the biophysical properties of concatenated hexameric and tetrameric human Orai1 channe

116 The 5,097 bp of the concatenated housekeeping gene sequence from the patient

117 ly, a simulated complete digest of 110 Mb of concatenated human sequence was used to create datasets

118 lar region of human JAM1 (hJAM1) reveals two concatenated Ig-type domains with a pronounced bend at t

119 led, resulting in the formation of extensive concatenated ILV networks and enhancing cargo sequestrat

120 al modeling to address the questions of when concatenated ILV networks evolved in plants and what dri

121 le budding profile in 5-20 ms and from three concatenated ILVs in 80-200 ms.

122 the same sample and returns a single, larger concatenated image.

123 These concatenated images and the original images were process

124 full-length HIV-1 Gag/Pol/Env immunogens or concatenated immunogens consisting of only highly conser

125 ertip, physical features in the stimulus are concatenated in a particular order.

126 ans collect a set of RCM mosaics (RCM images concatenated in a raster fashion to extend the field vie

127 The 100 chromatograms were concatenated in a vector.

128 ll Pumby, for Pumilio-based assembly) can be concatenated in chains of varying composition and length

129 on of the four alkyne chains that need to be concatenated in the proper pairwise manner but is also t

130 Concatenated inhibitions may represent exceptionally sta

131 e is known about how individual elements are concatenated into a behavioral sequence at the neural le

132 Several of the reactions were able to be concatenated into a continuous process, avoiding the nee

133 , sequences comprising informative SNPs were concatenated into a single combined data matrix and subj

134 epitopes, and mutations of driver genes were concatenated into a single mRNA construct to vaccinate p

135 The circular chromosomes of bacteria can be concatenated into dimers by homologous recombination.

136 ierarchical memory formed from surface codes concatenated into high-density parity check codes.

137 a given length (e.g. 12mer and 16mer) may be concatenated into longer sequences (e.g. four tandem wor

138 Additionally, we designed concatenated IP(3)R constructs to create tetrameric chan

139 To address this question, we created concatenated IP3R linked by short flexible linkers.

140 owever, the activity of channels formed from concatenated IP3R1 and IP3R2 heterodimers was dominated

141 A metabolomic approach employing concatenated LC-MS and NMR data was utilised for the fir

142 Calculation of the nucleotide divergence of concatenated locus sequences within and between MLST clu

143 rom genome sequences and using different (or concatenated) locus regions.

144 lucose oxidase) operating in concert as four concatenated logic gates (AND/OR), was designed to proce

145 ies of the clade, based on sequences of four concatenated low-copy nuclear loci.

146 e method, phylogenies are reconstructed from concatenated mammalian intronic genomes; the FFP derived

147 els with ultraconserved elements analyzed as concatenated matrices or within the multi-species coales

148 We used a concatenated matrix to assess the phylogenetic relations

149 We generated six phylogenetic trees using concatenated maximum likelihood and multispecies coalesc

150 Congruence of this tree with that for concatenated mitochondrial proteins suggests that the ro

151 A comparison of the concatenated ML tree and the primary concordance (BUCKy)

152 h tailored detection of NMR responses within concatenated modules.

153 tions only locally whereas large segments of concatenated molecules remain flexible and disordered.

154 Concatenated motifs translocate slower than the motifs a

155 allele fraction can be explained by complex concatenated mtDNA-derived sequences rearranged within t

156 VWF is a concatenated, multifunctional protein that has binding s

157 responsive shape-controlled frameworks from concatenated multiple helices (multihelices) with contro

158 n DNA double strand break repair, contains a concatenated N-terminal FHA-BRCT1/2 sequence that suppor

159 Kinetoplast DNA (kDNA) is organized into a concatenated network of mini and maxicircles, positioned

160 simulations (high-fidelity models) through a concatenated neural network.

161 We have concatenated new high-resolution solution structures of

162 co-localize with kinesin at the junctions of concatenated nuclei and at the outer poles of nuclear ch

163 Phylogenetic analyses of three concatenated nucleotide datasets using maximum likelihoo

164 Phylogenetic analyses of concatenated nucleotide sequences of protein-coding gene

165 Using a complete set of engineered concatenated olfactory CNG channels, with all combinatio

166 Concatenated Orai1 constructs with four MutA monomers ex

167 i1 monomer along with different preassembled concatenated Orai1 constructs, we recently demonstrated

168 Analysis of complete genome sequences or concatenated ORF1/ORF2 amino acid sequences indicated th

169 es constructed from 16S rRNA gene sequences, concatenated orthologous proteins, and the core gene set

170 t route featuring dicyclizations to form 2,4-concatenated oxazoles and the mild synthesis of thiazole

171 ening of a phage expression library with the concatenated palindrome 2 as probe detected a distinct c

172 Functional expression in Xenopus oocytes of concatenated pentameric (alpha7)5-, (alpha7)4(beta2)1-,

173 Expression of concatenated pentameric constructs with this stoichiomet

174 ion at or above 10 ppm levels require either concatenated peptide fractionation or enrichment via ant

175 recombinant proteins or synthetic peptides, concatenated peptides (QconCATs) were introduced as a co

176 l possible candidates were investigated, and concatenated polyproteins based on recombinantly express

177 A of all of the negative ion spectra and the concatenated positive and negative ion spectra showed a

178 We also present a two-level, concatenated procedure to improve the readout by use of

179 nonsynonymous SNPs, 121 intergenic SNPs, and concatenated profiles of 578 SNPs available for a subset

180 ubunits on receptor activation, we created a concatenated protein assembly that links all five subuni

181 topologies using just the easily aligned 13 concatenated protein coding genes confirmed phylogenetic

182 , we compiled a large data set composed of 7 concatenated protein sequences and performed comprehensi

183 lpC gene as well as phylogenomic analyses of concatenated protein sequences demonstrated that chrysop

184 More recent studies using concatenated protein sequences have increased the data p

185 Our proteotyping of HAdV-E strains using concatenated protein sequences in selected coding region

186 sister, including genome-scale alignments of concatenated protein sequences, as well as a genomic gen

187 In phylogenetic trees of concatenated protein sequences, SIVdeb, SIVsyk, and SIVg

188 ificant effect of purifying selection in the concatenated protein-coding genes in domestic Bactrian c

189 The estimated dN/dS < 1 in the concatenated protein-coding genes suggested purifying se

190 archaeal taxonomy that is derived from a 122-concatenated-protein phylogeny that resolves polyphyleti

191 For example, by mechanically unfolding concatenated proteins at different velocities, a dynamic

192 Moreover, concatenated PrxIII C168S reverts to single toroids on c

193 We find that the concatenated RBEs can facilitate the cytoplasmic transpo

194 The use of concatenated reads can outperform taxonomic recovery fro

195 comparison of pipelines containing merged vs concatenated reads combined with different trimming para

196 of scISA-Tools that demultiplex HIT-scISOseq concatenated reads into single-cell cDNA reads with >99.

197 The pipeline that used length-trimmed concatenated reads outperformed quality trimming in mock

198 The pipeline that combined merged and concatenated reads that were quality-trimmed performed b

199 The addition of concatenated reads to merged reads always increased pipe

200 m These properties recapitulate those of non-concatenated receptors expressed from a cRNA ratio of 1:

201 detect multivalent proximities by generating concatenated records from multiple local interactions.

202 artificial reference chromosome composed of concatenated reference sequences, the "concatesome," as

203 pression that initiates a complex circuit of concatenated regulatory feedback (i.e., miR-126/SPRED1,

204 Ps were produced displaying one, two or five concatenated RG1 epitopes without obstructing the VLP's

205 gruent with the phylogeny reconstructed from concatenated ribosomal protein genes.

206 f the conserved regions of DdRp subunits and concatenated ribosomal proteins and might represent the

207 class of materials that consist of discrete concatenated rings or cage particles interlocked in thre

208 isms, which lead to the formation of complex concatenated rings.

209 wo fuel-driven DNA-based ERNs regulated by a concatenated RNA transcription regulator.

210 then reports the English translation of all concatenated rules instantiated to reach that conclusion

211 s pixel-based analysis using chemometrics on concatenated sections of 2D extracted ion chromatograms

212 ally designed factorizable libraries made of concatenated segment libraries as a method of creating l

213 iFi reads that contain multiple interacting, concatenated segments (~350 bp to 2 kbp).

214 ore the fact that different positions in the concatenated sequence came from different genes.

215 thm decodes molecular proximities from these concatenated sequences and infers physical images of the

216 ents, followed by a second assembly of these concatenated sequences into large circular DNA.

217 to-female mutation rate ratio estimated from concatenated sequences of five perissodactyl introns was

218 Phylogenetic analysis of concatenated sequences of the eight loci indicated two d

219 The study demonstrates that the concatenated sequences of the housekeeping genes of B. b

220 otypeable pneumococci on a tree based on the concatenated sequences of the MLST loci but which had ST

221 However, a tree based on the concatenated sequences of the MLST loci in most cases un

222 The allelic profiles and/or concatenated sequences of the three genes agreed with mu

223 In contrast, concatenated sequences of two groups of mitochondrial ge

224 Merged sequences with the addition of concatenated sequences that were unable to be merged inc

225 s of the maximum likelihood (ML) tree of the concatenated sequences with individual gene trees showed

226 llelic profiles, phylogenetic trees based on concatenated sequences, and a recently developed method

227 mate is obtained by using distances based on concatenated sequences.

228 , we have compared a phylogenetic tree for a concatenated set of 50 widespread ribosomal proteins wit

229 isotope-labelled protein composed of several concatenated signature peptides as internal standard.

230 ruct a robust phylogeny of VARV by analyzing concatenated single nucleotide polymorphisms (SNPs) from

231 evolution-as inferred from the phylogeny of concatenated single-copy replisome genes-we propose a hy

232 a 42-base strand of DNA composed entirely of concatenated sticky ends and that binds to four local ne

233 The large number (5000-10,000) and their concatenated structure make them difficult to sequence.

234 rmed from other surrogate alpha6 subunits or concatenated subunits and studies of other heteromeric n

235 or that, we used receptors formed of mutated concatenated subunits to selectively eliminate one of th

236 ction, single-channel electrophysiology, and concatenated subunits, we reveal that an ancestral B-sub

237 as participants listened to three streams of concatenated syllables, containing either statistical re

238 Here, we employ a recently developed concatenated tandem array of consensus TF response eleme

239 atabase search strategy are reasonable; (ii) concatenated target-decoy database searches are preferab

240 roughput of SMS platforms by generating long concatenated templates from pools of short DNA molecules

241 on of the number of mutant subunits within a concatenated tetramer as predicted by a sequential model

242 companying dramatic changes in colors, but a concatenated tetramer displays a multicolored composite

243 ontrast, a single wild-type subunit within a concatenated tetramer was sufficient to achieve half of

244 The perylene cyclic dimer and its concatenated tetramer were characterized using both stru

245 activities for the monocyclic dimer and the concatenated tetramer.

246 f the number of mutant subunits present in a concatenated tetramer.

247 er of wild-type subunits incorporated into a concatenated tetrameric channel, and four wild-type subu

248 ere combined with wild-type subunits to form concatenated tetrameric channels with defined subunit co

249 amic mutant cycle analysis by constructing a concatenated tetrameric KCNQ1 channel and by introducing

250 by characterizing the kinetic properties of concatenated tetramers containing a variable number of w

251 rozygous situation, we generated a series of concatenated tetramers of Orai1 that included different

252 subunits regardless of their positioning in concatenated tetramers.

253 We concatenated the subjects (n = 3) in each category and c

254 Separately, RXP-E was concatenated to a cytoplasmic transduction peptide (CTP)

255 ucleotide where the same AT-rich sequence is concatenated to a GC-rich sequence known to undergo a B-

256 used by a transformer-based architecture and concatenated to a language representation to predict ant

257 These features were then concatenated to create a radiomics risk score (RRS).

258 alpha4, beta2, and delta subunits were concatenated to dimeric, trimeric, and, in some cases, p

259 tract latent representations, which are then concatenated to form a comprehensive multi-omics feature

260 series of overlapping 3-D images, which were concatenated to form a single 3-D mosaic (pixel resoluti

261 al tissue samples and the generated data are concatenated to train classification modules.

262 aper, we report the first MVSA analysis of a concatenated TOF-SIMS data set comprising positive ion a

263 Multiple duplicons are concatenated together to form larger blocks of wall-to-w

264 individual HLA alleles in combination with a concatenated transgene harboring 47 common cancer neoant

265 t oligomeric receptor ectodomains coupled to concatenated units of the light-generating Gaussia lucif

266 n developmental enhancers, we experimentally concatenated up to four enhancers from different genes a

267 These three-way arrays have then be concatenated using low-level data fusion strategy to obt

268 One set of amplicons was concatenated using overlap extension PCR.

269 et and two of its repeated homologues in the concatenated vector.

270 ing membrane, plant ILVs form as networks of concatenated vesicle buds by a novel vesiculation mechan

271 e independent features from spectrograms are concatenated via three approaches: weighted averaging, m

272 utationally efficient signal extraction from concatenated video sessions that enhances the detectabil

273 to eleven months were played long series of concatenated vowels, and the neural response to each vow

274 the enantiospecific complexation step can be concatenated with a preceding Au-catalyzed cyclization i

275 Surprisingly, the fibrils were abundantly concatenated with a proteinaceous polymer, here identifi

276 r feature extractor, the output of which was concatenated with baseline clinical data before putting

277 ed by the mentioned model, were selected and concatenated with clinical features.

278 cleotide XY, both computed from the sequence concatenated with its inverted complement).

279 cleotide XY, both computed from the sequence concatenated with its inverted complementary sequence.)

280 This Split LexA system can be concatenated with the Gal4/upstream activating sequence

281 ides that are common for all isoforms of APP concatenated with those tryptic peptides that are unique

282 OSCATs combine a series of epitope sequences concatenated with tryptic peptides in a single artificia

283 in by a sequence of rigid fragments that are concatenated without any degrees of freedom.