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1 ion in single cell oscillators of Neurospora crassa.
2 lulolytic gene expression and activity in N. crassa.
3 y initiation in the fungal model, Neurospora crassa.
4 and acts at the step of bilayer fusion in N. crassa.
5 cognate codons are used for initiation in N. crassa.
6 n in the model filamentous fungus Neurospora crassa.
7 r of lignocellulolytic gene expression in N. crassa.
8 growth in the filamentous fungus Neurospora crassa.
9 een characterized in detail using Neurospora crassa.
10 ation in the multicellular fungus Neurospora crassa.
11 emic species, Leavenworthia alabamica and L. crassa.
12 ulation in the filamentous fungus Neurospora crassa.
13 of self-compatibility in L. alabamica and L. crassa.
14 tide PAF26 using the model fungus Neurospora crassa.
15 ol repetitive selfish elements in Neurospora crassa.
16 esponses in the filamentous fungi Neurospora crassa.
17 ging of genetically engineered strains of N. crassa.
18 ll RNAs in the filamentous fungus Neurospora crassa.
19 mplexes in the filamentous fungus Neurospora crassa.
20 tation of blue-light responses in Neurospora crassa.
21 49 SSRs of 963 SSR types in the genome of N. crassa.
22 r HP1 localization and DNA methylation in N. crassa.
23 molecular markers for genetic studies in N. crassa.
24 otein from the filamentous fungus Neurospora crassa.
25 pathway in the filamentous fungus Neurospora crassa.
26 ulation of the filamentous fungus Neurospora crassa.
27 nation in the filamentous fungus, Neurospora crassa.
28 se chromosomes between N. tetrasperma and N. crassa.
29 e common in the ascomycete mould, Neurospora crassa.
30 point mutation (RIP) of repetitive DNA in N. crassa.
31 tant that is used in circadian studies in N. crassa.
32 f4 against F. graminearum but not against N. crassa.
33 ponent of the circadian system in Neurospora crassa.
34 nance of regular hyphal growth in Neurospora crassa.
35 ation of nitroethane catalyzed by Neurospora crassa 2-nitropropane dioxygenase was investigated by me
37 ating functional variation of proteins in N. crassa, 3) there are different levels of evolutionary fo
39 ast, the histone modifications in Neurospora crassa, a convenient model organism for multicellular eu
41 ication in the filamentous fungus Neurospora crassa, a simple and experimentally amenable model syste
44 that the minimal functional domain of the N. crassa AAP corresponded closely to the region that was m
45 ur understanding of the light response in N. crassa, about which the most is known, and will then jux
47 log in the filamentous ascomycete Neurospora crassa affects the circadian clock output, yielding a pa
48 show that the powerful tools available in N. crassa allow for a comprehensive system level understand
49 (Chromista), and the ascomycetes Neurospora crassa and Aspergillus nidulans (Fungi), and bring to li
51 data, we identified regulatory factors in N. crassa and characterized one (PDR-2) associated with pec
52 ulans, Aspergillus fumigatus, and Neurospora crassa and expressed the genes as secreted proteins with
54 pecific expression and editing in Neurospora crassa and F. verticillioides Furthermore,F. graminearum
55 s growth of the ascomycete fungi, Neurospora crassa and Fusarium graminearum, at micromolar concentra
56 Two species of Fungiidae corals, Ctenactis crassa and Herpolitha limax, displaying YBD-like lesions
57 lencing in the filamentous fungus Neurospora crassa and identified a bromo-adjacent homology (BAH)-pl
59 changes in gating the photic response of N. crassa and indicate that LOV-LOV homo- or heterodimeriza
60 te fungi Fusarium graminearum and Neurospora crassa and induces accumulation of reactive oxygen speci
61 The DEAD-box proteins CYT-19 in Neurospora crassa and Mss116p in Saccharomyces cerevisiae are broad
62 The DEAD-box proteins CYT-19 in Neurospora crassa and Mss116p in Saccharomyces cerevisiae are gener
63 starch-active PMOs from the fungi Neurospora crassa and Myceliophthora thermophila, NcAA13 and MtAA13
67 equence information available for Neurospora crassa and other fungi has greatly facilitated evolution
68 owing the divergence of S. cerevisiae and N. crassa and provides insight into the evolution of kinase
73 er (PTC) function was analyzed in Neurospora crassa and wheat germ translation extracts using the tra
74 lly inoculated with the mycelium (Neurospora crassa), and following the initial incubation period, th
75 ulator of protoperithecial development in N. crassa, and double mutants carrying deletions of both vi
76 witches in the filamentous fungus Neurospora crassa, and found that one activates and two repress gen
77 e role of MAP kinase signaling in Neurospora crassa, and to identify downstream target genes of the p
78 mately 35% of genes marked by H3K27me3 in N. crassa are also H3K27me3-marked in Neurospora discreta a
79 aromyces cerevisiae and CYT-19 of Neurospora crassa are ATP-dependent helicases that function as gene
80 st eukaryotes, the centromeric regions of N. crassa are rich in sequences that are related to transpo
83 iae GCN4, S. cerevisiae CPA1, and Neurospora crassa arg-2, regulation by uORFs controls expression in
84 ng an in vivo tethering system in Neurospora crassa Artificial recruitment of the H3K9 methyltransfer
87 Using the cellulolytic fungus Neurospora crassa as a model, we identified a xylodextrin transport
90 ierarchy of initiation at start codons in N. crassa (AUG >> CUG > GUG > ACG > AUA approximately UUG >
92 ungi, such as the model eukaryote Neurospora crassa, but is absent from the genomes of baker's yeast
94 T80 pathway is not involved in meiosis in N. crassa, but rather regulates the formation of female rep
95 l for light-mediated responses in Neurospora crassa, but the molecular mechanisms underlying gene ind
96 issues in the microbial eukaryote Neurospora crassa by using a "reverse-ecology" population genomic a
97 ture of the ring of c subunits in Neurospora crassa by using data from the crystal structure of the h
98 strial scale enzymes in the model system, N. crassa, by removing the endogenous negative feedback reg
99 l timing of the robust circadian clock in N. crassa can be disrupted in the dark when maintained in a
100 ticivorans oxygenase 2 (NOV2) and Neurospora crassa carotenoid oxygenase 1 (CAO1), using piceatannol
107 K [Osmotically Sensitive-2 (OS-2)] by the N. crassa circadian clock allows anticipation and preparati
108 omprehensive dynamic model of the Neurospora crassa circadian clock that incorporates its key compone
115 dentified in one of the double mutants of N. crassa conferred resistance to both bafilomycin and conc
117 ase (CDH) isolated from the fungi Neurospora crassa, Corynascus thermophilus, and Myriococcum thermop
120 howed that one of these proteins, Neurospora crassa CYT-18, binds group I introns by using both its N
122 up I intron ribozyme by CYT-19, a Neurospora crassa DEAD-box protein that functions as a general chap
123 have generated mutant strains of Neurospora crassa defective in six subunits, C, H, a, c, c', and c'
124 t-induced point (RIP) mutation in Neurospora crassa degrades transposable elements by targeting repea
125 e of MEI3, the only RAD51/DMC1 protein in N. crassa, demonstrating independence from the canonical ho
128 ree eukaryotic NR from the fungus Neurospora crassa, documenting that Moco is necessary and sufficien
129 rom a favored carbon source to cellulose, N. crassa dramatically up-regulates expression and secretio
130 rbon source such as sucrose to cellulose, N. crassa dramatically upregulates expression and secretion
131 a tritici, Magnaporthe oryzae and Neurospora crassa, exhibited PAMP activity, inducing cell death in
132 ed from one of its natural hosts, Neurospora crassa, exists in a multimeric form and has the ability
134 Notably, the only other NMO from Neurospora crassa for which biochemical evidence is available lacks
135 e hydrophobin EAS from the fungus Neurospora crassa forms functional amyloid fibrils called rodlets t
138 nication and fusion in the fungus Neurospora crassa Genetically identical germinating spores of this
140 o initiation of this project, the Neurospora crassa genome assembly contained only 3 of the 14 telome
141 istributions of the SSRs in the sequenced N. crassa genome differ systematically between chromosomes
147 ssion data, the secretome associated with N. crassa growth on Miscanthus and cellulose was determined
156 The eukaryotic filamentous fungus Neurospora crassa has proven to be a dependable model system for th
158 l other than the model ascomycete Neurospora crassa--has been neglected, leaving this type of questio
159 nisms in Aspergillus nidulans and Neurospora crassa have been intensively studied, leading to importa
160 nd function of DNA methylation in Neurospora crassa have led to a greater understanding of heterochro
162 pombe and the filamentous fungus Neurospora crassa have served as important model systems for RNAi r
163 ponent of the quelling pathway in Neurospora crassa, have rapidly diverged in evolution at the amino
164 ted mutants of each of the four classical N. crassa HDAC genes and tested their effect on histone ace
165 A locus DNA methylation (DLDM) in Neurospora crassa Here we show that the conserved exonuclease ERI-1
166 tion experiments, a heterocomplex between N. crassa HET-C1 and PhcA was associated with phcA-induced
169 urth component, Neurospora protein 55 (an N. crassa homolog of p55/RbAp48), is critical for H3K27me3
171 s able to attach and extensively colonize N. crassa hyphae, while an Escherichia coli control showed
172 d time-lapse live-cell imaging of Neurospora crassa in microfluidic environments to show how constrai
173 stal structures of an enzyme from Neurospora crassa in the resting state and of a copper(II) dioxo in
174 ined by translating mRNAs in a homologous N. crassa in vitro translation system or in rabbit reticulo
175 on deletion of Puf4 in filamentous fungi (N. crassa) in contrast to the increase upon Puf3 deletion i
179 ning microscopy that a LPMO (from Neurospora crassa) introduces carboxyl groups primarily in surface-
181 The eukaryotic model organism Neurospora crassa is an excellent system to study evolution and bio
183 The model filamentous fungus Neurospora crassa is capable of utilizing a variety of carbohydrate
185 romatin in the filamentous fungus Neurospora crassa is marked by cytosine methylation directed by tri
187 tion/translation feedback loop in Neurospora crassa is the protein FREQUENCY (FRQ), shown here shown
190 -4 (PRD-4), the CHK-2 ortholog of Neurospora crassa, is part of a signaling pathway that is activated
192 ted a number of site-directed variants of N. crassa LAD that are capable of utilizing NADP(+) as cofa
193 ils of rosette leaves, has shown that the L. crassa LFY ortholog, LcrLFY, rescues most aspects of flo
196 cture of a C-terminally truncated Neurospora crassa mitochondrial tyrosyl-tRNA synthetase (CYT-18 pro
202 the Schizosaccharomyces pombe and Neurospora crassa Nbp2p orthologues and the high conservation of th
203 rresponding dicer-like genes from Neurospora crassa [Ncdcl-1 (50.5%); Ncdcl-2 (38.0%)] and Magnaporth
205 family AA9 LPMOs from the fungus Neurospora crassa, NcLPMO9A (NCU02240), NcLPMO9C (NCU02916), and Nc
206 e have characterized an LPMO from Neurospora crassa (NcLPMO9C; also known as NCU02916 and NcGH61-3).
207 We demonstrate that an LPMO from Neurospora crassa, NcLPMO9C, indeed degrades various hemicelluloses
209 s, such as BarA and TorS; and the Neurospora crassa Nik-1 (Os-1) sensor that contains a tandem array
211 CdCl2 was contacted with supernatants of N. crassa obtained after growth in urea-containing medium.
213 we performed transcriptional profiling of N. crassa on 40 different carbon sources, including plant b
214 In this study, we show that the Neurospora crassa osmosensing MAPK pathway, essential for osmotic s
215 ing the model filamentous fungus, Neurospora crassa, our microfluidic system enabled direct visualiza
217 es demonstrated that PAS is not unique to N. crassa PAS homologs likely influence the distribution of
219 small modules engineered from the Neurospora crassa photoreceptor Vivid by orthogonalizing the homodi
224 alyses of purified QDE-1 polymerases from N. crassa (QDE-1(Ncr)) and related fungi, Thielavia terrest
225 ously determined apo structure of Neurospora crassa QDE2 revealed that the PIWI domain has two subdom
226 spores in the filamentous fungus Neurospora crassa rcd-1 alleles are highly polymorphic and fall int
227 hat the model cellulolytic fungus Neurospora crassa relies on a high-affinity cellodextrin transport
229 how the model filamentous fungus Neurospora crassa responds to the three main cell wall polysacchari
230 the introns of the model organism Neurospora crassa revealed a different organization at the 3' end o
231 three eukaryotic model organisms, Neurospora crassa, Saccharomyces cerevisiae, and Candida albicans,
233 crystalline precipitates on the hyphae of N. crassa showed that the main elements present in the crys
234 mponent of the circadian clock in Neurospora crassa, shows daily cycles that are exquisitely sensitiv
237 cts derived from MacroD-deficient Neurospora crassa strain exhibit a major reduction in the ability t
238 isms (SNPs) between the reference Neurospora crassa strain Oak Ridge and the Mauriceville strain (FGS
239 ur algorithm on a real dataset of Neurospora crassa strains, using the genetic and geographic distanc
241 erived from S. cerevisiae OXA1 or Neurospora crassa SU9, both coding for hydrophobic mitochondrial pr
242 d the related protein Cyt-19 from Neurospora crassa suggest that these proteins form a subclass of DE
244 analysis affirmed that the reconstituted N. crassa telomerase synthesizes TTAGGG repeats with high p
246 the canonical 5'-splice site GUAUGU, the N. crassa TER intron contains a non-canonical 5'-splice sit
247 t molecular coevolution of LcrLFY and the L. crassa TFL1 ortholog, LcrTFL1, contributed to the evolut
248 al new PMO families in the fungus Neurospora crassa that are likely to be active on novel substrates.
249 ation by IME-2 of a cell death pathway in N. crassa that functions in concert with the VIB-1 cell dea
250 TER 3'-end cleavage mechanism in Neurospora crassa that is distinct from that found specifically in
251 mponent of the circadian clock of Neurospora crassa that regulates the abundance of its core transcri
253 m graminicola, the model organism Neurospora crassa, the human pathogen Sporothrix schenckii, and the
259 ombe, and one filamentous fungus, Neurospora crassa-three species that arguably are not representativ
260 h wild-type and mutant strains of Neurospora crassa to gain insight into the role of heterochromatin
261 used the model filamentous fungus Neurospora crassa to search for uncharacterized transcription facto
262 he NPS6 ortholog from the saprobe Neurospora crassa to the Deltanps6 strain of C. heterostrophus rest
263 and constitutive heterochromatin, Neurospora crassa, to explore possible interactions between element
265 methods refined our understanding of the N. crassa transcriptional response to cellulose and demonst
266 Analyses of the 5'-leader regions in the N. crassa transcriptome revealed examples of highly conserv
268 is suggests that the widespread and basal N. crassa-type spliceosomal cleavage mechanism is more ance
269 meiosis in the filamentous fungus Neurospora crassa, unpaired genes are identified and silenced by a
271 ecular Cell, Lee et al. show that Neuropsora crassa uses several Dicer-dependent and -independent pat
272 his system, derived from genes in Neurospora crassa, uses the transcriptional activator QF to induce
273 We initially identified TER from Neurospora crassa using a novel deep-sequencing-based approach, and
274 have successfully applied BiFC in Neurospora crassa using two genes involved in meiotic silencing by
278 2 gene encoding for the enzyme in Neurospora crassa was cloned, expressed in Escherichia coli, and th
280 s that showed expression differences when N. crassa was cultured on ground Miscanthus stems as a sole
281 heterologous expression method in Neurospora crassa was developed as a step toward connecting regiose
282 earch, the urease-positive fungus Neurospora crassa was investigated for the biomineralization of cal
284 d glucose homeostatic process, in Neurospora crassa We find that glycogen synthase (gsn) mRNA, glycog
285 k in the circadian model organism Neurospora crassa We show that, in a ras2-deficient strain, the per
286 p, H3K9me, and DNA methylation in Neurospora crassa, we built and tested mutants of the putative H3S1
287 ic approach in the model organism Neurospora crassa, we identified two alleles of a gene, NCU04278, e
288 nt in the model ascomycete fungus Neurospora crassa, we show that genetic diversity is maintained by
289 Different PMOs isolated from Neurospora crassa were found to generate oxidized cellodextrins mod
290 merly Mortierella) ramanniana and Neurospora crassa were introduced into maize using an embryo-enhanc
291 while maintaining light responsiveness in N. crassa when held in a steady metabolic state using biore
292 ly active in the meiotic cells of Neurospora crassa, where they evaluate the mutual identity of homol
293 nctional genomics resources available for N. crassa, which include a near-full genome deletion strain
294 is study, we employed LPMO9C from Neurospora crassa, which is active toward cellulose and soluble bet
295 n by a fungal TPP riboswitch from Neurospora crassa, which is mostly located in a large intron separa
297 he most is known, and will then juxtapose N. crassa with A. nidulans, which, as will be described bel
299 cells of the model fungal system, Neurospora crassa, with droplet microfluidics and the use of a fluo
300 quation for the Caribbean sponge Aiolochroia crassa yielded age estimates of 5.2-10.4 y for the large