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1 to address a larger part of the proteome by cross-linking.
2 eases the oxygen availability during corneal cross-linking.
3 PP), c) protein footprinting, and d) protein cross-linking.
4 rthritis, and following IgG Fcgamma receptor cross-linking.
5 and 1627 cm(-1) increased with increasing GA cross-linking.
6 intermediates, and investigate them by thiol cross-linking.
7 icated by in vivo and in vitro site-directed cross-linking.
8 and state-dependent non-canonical amino acid cross-linking.
9 meshwork due to its dendritic structure and cross-linking.
10 obase targeting from recognition to covalent cross-linking.
11 oxygen allowing a potentially more efficient cross-linking.
12 that enable facile and cytocompatible photo-cross-linking.
13 ,2'-(ethylenedioxy) diethanethiol (EDT)) for cross-linking.
14 ations in the degree of iron-induced protein cross-linking.
15 iosynthetic explanation for colibactin's DNA cross-linking activity and paves the way for further stu
19 This suggests that OSA could be acting as a cross-linking agent between starch chains, reducing the
22 C-MS/MS analyses revealed that the levels of cross-linking AGEs were significantly higher in the glyc
27 in live mycobacteria, enabling in vivo photo-cross-linking and click-chemistry-mediated analysis of m
28 an imaging could rapidly identify degrees of cross-linking and detected calcified regions with high c
31 way, supplemented with results from chemical cross-linking and hydrogen-deuterium exchange MS, reveal
32 on of Endogenous Argonaute-bound RNAs)-CLIP (Cross-Linking and Immuno-Precipitation) to explore the r
33 of RNA binding proteins (RBP) motifs and UV-cross-linking and immunoprecipitation (CLIP) assays iden
35 ing photoactivatable ribonucleoside-enhanced cross-linking and immunoprecipitation analysis, we found
36 this, we performed enhanced ultraviolet (UV) cross-linking and immunoprecipitation followed by sequen
38 sed photoactivatable ribonucleoside-enhanced cross-linking and immunoprecipitation to demonstrate tha
40 tended the target validation method chemical cross-linking and isolation by pull-down (Chem-CLIP) to
41 y target tau pre-mRNA in cells, via chemical cross-linking and isolation by pull-down target profilin
42 this review is on the fundamentals of photo-cross-linking and key criteria identified for the succes
43 ibroblast polarization; elastomers with high cross-linking and low deformability were required for po
44 rom resolution, in conjunction with chemical cross-linking and mass spectrometric analysis of conform
47 Here, we utilized structure-guided cysteine cross-linking and proteolysis-coupled gel analysis to pr
49 ially inhibit XCTK2 antiparallel microtubule cross-linking and sliding by decreasing the microtubule
54 chemical modifications, e.g., (succinylation/cross-linking) and two enzymes modification (alpha-amyla
55 e functionalization, polymer conjugation and cross-linking, and biomolecular labeling in the native c
58 erimental factors, such as antibody quality, cross-linking, and PCR biases, are known to affect the o
59 regulate glycan strand length, the degree of cross-linking, and the addition of other modifications t
60 imal keratometry (K(max)) at 12 months after cross-linking, and we considered additional topographic,
61 g whether transepithelial and epithelium-off cross-linking are comparable in their safety and efficac
63 llowing a straightforward synthetic route by cross-linking arylamine-based ligands with a simple thie
64 ified IAA response and lignin synthesis/wall cross-linking as some of the key processes occurring dur
65 was shown to influence network topology upon cross-linking, as evidenced by sequence-dependent rubber
67 ccinimide or isopeptide bond moieties due to cross-linking between Asn or Gln and Lys side chains.
68 ic unit extended farther away from the core, cross-linking between neighboring columns was suggested
70 whose structure and dynamics are modified by cross-linking, bridging proteins, and cleavage by matrix
72 ow allows for application of a wide range of cross-linking chemistries and enables parallel compariso
73 od development, combining several orthogonal cross-linking chemistries as well as improvements in sea
75 the case of EMCS, we find that the expected cross-linking chemistry is accompanied by a competing ch
76 hils are activated in the presence of CD300c cross-linking compared with activation through the IgE/F
79 lagen is a structural protein whose internal cross-linking critically determines the properties and f
80 g., free radical chain polymerization, click cross-linking, cross-linking due to oxidation of phenoli
83 ling was linearly dependent on the degree of cross-linking (DC), and higher water flux was obtained i
85 he linker concentration still determines the cross-linking degree of the vitrimers, which originates
87 We further demonstrate that this level of cross-linking density is sufficient to model the archite
88 2 mJ/kg was obtained by a hydrogel with a 3% cross-linking density, a 200-300 mum particle size, and
92 mutant CTxB-single-GM1 complexes by antibody cross-linking does not rescue the membrane curvature phe
93 X toxin with three effector domains-an actin cross-linking domain (ACD), a Rho inactivation domain (R
94 l chain polymerization, click cross-linking, cross-linking due to oxidation of phenolic groups), (ii)
95 discussed in detail, including (i) covalent cross-linking (e.g., free radical chain polymerization,
96 The general mechanisms associated with photo-cross-linking (e.g., free-radical chain polymerization,
97 e Diels-Alder reactions), and (iii) physical cross-linking (e.g., guest-host interactions, hydrogen b
98 n of phenolic groups), (ii) dynamic covalent cross-linking (e.g., Schiff base formation, disulfide fo
101 These results indicate that dynamic actin cross-linking enables the cytoplasm to flow at long time
103 ds at the interface as a result of oxidative cross-linking, even though the modulus of the bulk of th
107 ndent manner and show that microtubule actin cross linking factor 1 (MACF1), a scaffolding protein wi
109 ional changes associated with gating promote cross-linking for I409C/R410C, which in turn decreases c
112 e in SikuliX to coordinate image capture and cross-linking functions in Zeiss Zen Black with image pr
114 d between transepithelial and epithelium-off cross-linking groups in the change in K(max) at 12 month
117 uvate kinase muscle isozyme M2 and after KIR cross-linking have increased phosphorylation of the meta
122 ment, chromatin immunoprecipitation-seq, and cross-linking immunoprecipitation-seq showed that the KH
124 fety and efficacy of transepithelial corneal cross-linking in comparison with the established epithel
126 including mechanochromism and force-induced cross-linking in ferrocenophane-containing polymers.
127 lysis, we analyzed the pattern of apoprotein cross-linking in isolated human HDL either by synthetic
129 e data indicate a critical role for collagen cross-linking in OSCC tumor progression and metastasis,
132 rmation of a tetramer was further studied by cross-linking in the presence of detergents and lipids.
133 urrent scientific consensus is that collagen cross-linking increases with age and that this increase
136 mation and is categorized as a new adipokine cross-linking innate immunity and metabolic disorders in
137 h-quality transcriptome-wide in vivo RBP-RNA cross-linking interaction datasets generated by the same
138 y engineering, defect passivation, molecular cross-linking, interfacial energy alignment and electron
139 biochemical analyses to examine if collagen cross-linking is associated with tumor stage and regiona
141 nerated by Cin8 and Kip3 through microtubule cross-linking is essential for signaling efficient cohes
142 seen when actin assembly or disassembly and cross-linking is experimentally disrupted in fibroblasts
143 e mechanism that has been implicated in this cross-linking is glycation through formation of advanced
144 integrin alphaLbeta2 (LFA-1) on T cells, and cross-linking layilin promoted the activated state of th
145 MT cytoskeleton in axons and dendrites: the cross-linking level of MTs by motors and the load acting
146 uantitatively characterize the dependence of cross-linking lifetime of actin cross-linkers on mechani
147 es to nutrient availability, we performed UV cross-linking, ligation and sequencing of hybrids (CLASH
148 ment in type III peroxidase-mediated polymer cross-linking, lignification and, possibly, cell expansi
149 the limited actions of three kinesins and a cross-linking MAP that are known to have effects in main
150 e used an integrated combination of chemical cross-linking mass spectrometry (CXMS), molecular geneti
152 ng question is to understand how large-scale cross-linking mass spectrometry (XL-MS) can confirm and
154 vel interactions identified by proteome-wide cross-linking mass spectrometry (XL-MS) studies is criti
155 To illuminate these dark areas, we applied cross-linking mass spectrometry (XL-MS) to obtain bioche
157 Here, we have developed a multichemistry cross-linking mass spectrometry approach enabled by thre
160 ffinity purification, live cell imaging, and cross-linking mass spectrometry to build integrative str
162 ted using cryoelectron microscopy (cryo-EM), cross-linking mass spectrometry, and homology modeling.
163 Mycoplasma pneumoniae We combined whole-cell cross-linking mass spectrometry, cellular cryo-electron
166 n nuclear magnetic resonance (NMR), chemical cross-linking, mass spectrometry, and molecular docking.
168 These results suggest that FXIIIa-mediated cross-linking may contribute to the formation of Abeta d
170 oactivity of these natural products to a DNA cross-linking mechanism, but this hypothesis was not con
171 le hydrogels, obtained by employing distinct cross-linking mechanisms, to assess their potential for
177 active-site-directed photoprobe with double cross-linking moieties, we demonstrate that GSAP modifie
179 designed and synthesized new functional and cross-linking monomers, which are oxidized at sufficient
180 -insoluble digestion method and quantitative cross-linking MS, we identified the previously mapped fi
181 ers with appropriate side chains, backbones, cross-linking networks, and flexible blocks, and (3) emp
183 sm in the lens and suggest that AGE-mediated cross-linking of alpha-crystallin-client complexes could
185 olution pH, which promoted oxidation-induced cross-linking of catechol and subsequently decreased its
188 Mast cell and basophil activation by antigen cross-linking of FcepsilonRI-bound IgE is central to all
189 the chains are kinked, enabling non-covalent cross-linking of fibrils and disfavoring formation of pa
190 life-threatening allergic reaction caused by cross-linking of high-affinity IgE antibodies on the sur
193 phylaxis is classically mediated by allergen cross-linking of IgE bound to the alpha chain of Fcepsil
196 C, which in turn decreases channel currents, cross-linking of L402C/L403C is functionally silent in m
197 te with maize psbA mRNA by: (i) formaldehyde cross-linking of leaf tissue followed by antisense oligo
200 A, reconstituted in nanodiscs, with cysteine cross-linking of natively expressed membrane-embedded Md
201 cule, which we denote RIPR-PD1, that induces cross-linking of PD-1 to CD45 and inhibits both tonic an
202 Here we demonstrate that glutaraldehyde cross-linking of PEGylated oligolysine-coated DNs extend
204 to recognize epitopes formed by the covalent cross-linking of proinsulin and secretory granule peptid
205 ntinuous tuning of RBC strains, and chemical cross-linking of RBCs, a model for diseased cells, leads
208 nm thick carbon nanomembrane (CNM) made from cross-linking of terphenylthiol (TPT) self-assembled mon
210 ccurs via multiple mechanisms, which include cross-linking of the IgE-bound, high-affinity IgE recept
212 results in topological [2 + 2] cycloaddition cross-linking of the pai-stacked layers in 3D COFs.
213 erential scanning calorimetry, demonstrating cross-linking of the polymer after curing at 120 degrees
215 d consequent inactivation through C-terminal cross-linking of the tear mitogen lacritin, leading to s
217 d by transglutaminase-2, but the function of cross-linking on their elastic properties is yet to be e
218 propose that increased signaling by FcgammaR cross-linking on TLR-stimulated macrophages can paradoxi
219 ed with excessive myocardial collagen type-I cross-linking or CCL+ (i.e., decreased carboxy-terminal
220 fabrication, achieved by oxidative covalent cross-linking or formation of metal coordination interac
222 identified at least two distinct DOPA-based cross-linking pathways during byssus fabrication, achiev
223 al peptide synthesis with oxidative aromatic cross-linking performed by cytochrome P450 enzymes.
224 ones with naphthalenes as a dynamic covalent cross-linking platform that enables green light-induced
225 nd activate T cells with solution ligands by cross-linking pMHC or using multivalent antibodies to TC
229 rminal d-ala-d-ala and reduced peptidoglycan cross-linking, prompting us to investigate synergism bet
233 d morphology, targeting vimentin or vimentin cross-linking proteins could provide a therapeutic appro
234 al conditions in the absence of any specific cross-linking proteins, which suggests that it is driven
237 with a 2-methoxy substituent showed a faster cross-linking reaction rate and higher ICL efficiency th
238 ins within those structures by a photodriven cross-linking reaction so that they can be affinity puri
239 a complementary approach, we utilized HaXS8 cross-linking reactions between Halo and SNAP proteins a
240 ebrates, and there is evidence for oxidative cross-linking reactions occurring in extracellular prote
241 ed with conventional methods using redundant cross-linking reactions, our method is simpler, faster,
242 oyed a normalization strategy to dissect the cross-linking reactivity of individual residues in order
244 y adding either supplemental TNF ligand or a cross-linking reagent, suggesting that the antibody agon
248 amages neurons and the myocardium by protein cross-linking, resulting in conglomerations and cell dea
249 f the PpiD-SecY interaction by site-directed cross-linking revealed that PpiD and the established Sec
252 linking of isolated nuclei we determined the cross-linking sites of several factors including chromat
253 microbial efficacy, in vitro, of 5 candidate cross-linking solutions against 5 different microbial pa
256 a major limitation in current proteome-wide cross-linking studies and demonstrates how to address a
260 f point mutants in both AimB and MreB, photo-cross-linking studies with site-specific unnatural amino
261 on native tissues, as well as peptide-based cross-linking studies, we have identified at least two d
265 he antibody bound to TNFR2 through a natural cross-linking surface and that T(reg) cell expansion was
267 lient complexes underwent greater extents of cross-linking than did uncomplexed protein mixtures.
268 a suggest a long-range stabilising effect of cross-linking that occurs due to the covalent linkage of
269 challenge and chemically or photochemically cross-linking the cornea for therapy presents a unique a
272 aphene nanosheets (GNSs) and following photo-cross-linking, the resultant nanostructured HRP@PGH/GNSs
273 oss-linker alpha-actinin-4 and show that the cross-linking time of alpha-actinin-4 homodimers increas
274 s unique arginine (Arg59) and simultaneously cross-linking to another arginine (Arg45) located across
275 of TM2 in TM signaling, we use oxidative Cys cross-linking to demonstrate that TM2 extends over the f
276 roscopy, molecular dynamics, and biochemical cross-linking to determine a 2.3 angstrom structure, and
278 l to promote Kinesin-14 parallel microtubule cross-linking to help focus spindle poles for efficient
279 Global analysis of BUD13 knockdown and BUD13 cross-linking to RNA revealed a subset of introns that s
280 tosis, are mediated by FcgammaRs, which upon cross-linking transduce signals that modulate the functi
282 underwent multimerization by o,o'-dityrosine cross-linking under reducing conditions that disrupt dis
283 OCTs of 25 eyes of 25 patients post corneal cross-linking using the Dresden protocol, at 3 months po
287 l stiffness decreased when active or passive cross-linking was reduced and softer cells polarized on
290 se functions through SEPT9-dependent F-actin cross-linking, which enables the generation of F-actin b
292 Here, intact yeast nuclei were subject to cross-linking with disuccinimidyl sulfoxide (DSSO) and a
294 scribes a workflow for utilizing large-scale cross-linking with mass spectrometry (XL-MS) to make sys