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1 ich is initiated by poly(A) tail shortening (deadenylation).
2 stimulates removal of its poly(A) tail (i.e. deadenylation).
3 g evidence indicates that TOBs regulate mRNA deadenylation.
4 contains multiple enzymes that catalyze mRNA deadenylation.
5 nanos1 and TDRD7 from miR-430b-mediated RNA deadenylation.
6 3 acts through a general mechanism to affect deadenylation.
7 dependent and might protect the targets from deadenylation.
8 F1 also represses translation independent of deadenylation.
9 is sufficient for repression, independent of deadenylation.
10 nd to be required for eIF4E effects on COX17 deadenylation.
11 tide addition to protect messenger RNAs from deadenylation.
12 domain of PAB1 blocked both their effects on deadenylation.
13 caf1b, AtCAF1b targets AtPI4Kgamma3 mRNA for deadenylation.
14 bunits CAF1 and CCR4 as factors required for deadenylation.
15 capping/5'-to-3' or 3'-to-5' direction after deadenylation.
16 RNAs, premature termination codons, and mRNA deadenylation.
17 larization, correspondingly accelerated CCR4 deadenylation.
18 ors involved in translation are required for deadenylation.
19 As that have previously undergone more rapid deadenylation.
20 PAB1 oligomerization is a required step for deadenylation.
21 binding protein (PAB1) as necessary for CCR4 deadenylation.
22 4p and Pop2p deadenylases in Mpt5p-regulated deadenylation.
23 ntially regulate transcripts at the level of deadenylation.
24 zyme to the target mRNA, thereby stimulating deadenylation.
25 d mRNA decay initiated by miRNA-guided rapid deadenylation.
26 anced mt-mRNA decay by translation-dependent deadenylation.
27 residue predicted to bind magnesium disrupts deadenylation.
28 ynthetic RNA substrate in a process known as deadenylation.
29 transcripts, apparently by initiating their deadenylation.
30 vo for controlling the rate of specific mRNA deadenylation.
31 n (PABP) in facilitating both protection and deadenylation.
32 pathway for closed-loop forming mRNAs after deadenylation.
33 thways for translational repression and mRNA deadenylation.
34 rotects RNA(3'-rA) from ligation and further deadenylation.
35 3'-termini, consistent with protection from deadenylation.
36 from accumulating despite accelerated target deadenylation.
37 ciated factor 1 (CAF1), is a major player in deadenylation.
38 xpression stabilized TNF mRNA by suppressing deadenylation.
39 tibility to mutations inhibiting cytoplasmic deadenylation, a process required for both 5'-to-3' and
40 trolled by a member of the Pumilio family of deadenylation activators Puf3p, requires an active Ccr4p
41 quitination of CNOT7 by MEX-3C regulates its deadenylation activity and is required for MHC-I mRNA de
42 4A2 into the CCR4-NOT complex inhibits CNOT7 deadenylation activity in contrast to DDX6 which enhance
44 n extensively characterized exonuclease with deadenylation activity that controls mRNA stability in p
45 crystal structures are essential for the 3'-deadenylation activity, suggesting that 3'-adenosine may
51 results suggest that miR-430 facilitates the deadenylation and clearance of maternal mRNAs during ear
52 mRNA is sufficient for both protection from deadenylation and deadenylation-independent decapping an
56 scription-pulsing approaches to monitor mRNA deadenylation and decay kinetics, we demonstrate the exi
59 the beta-globin reporter mRNA promoted rapid deadenylation and decay of hypo-adenylated reporter mRNA
76 many maternal proteins are downregulated by deadenylation and destabilization of their encoding mRNA
77 taining AU-rich elements (ARE), resulting in deadenylation and destabilization of these transcripts.
86 with a functional assay directly monitoring deadenylation and mRNA decay to characterize the effects
91 decapping-independent NMD pathway involving deadenylation and subsequent 3'-->5' exonucleolytic deca
92 stabilizes host stress response mRNAs after deadenylation and subsequent cleavage near the adenylate
93 rated to direct target RNA reduction through deadenylation and subsequent degradation of target trans
97 that the interplay between polyadenylation, deadenylation and tumour-suppressor factors might preven
99 m zinc finger (TZF) domain, TTP promotes the deadenylation and ultimate decay of target transcripts.
100 ed regions (UTRs) and subsequently promoting deadenylation and ultimate destruction of those mRNAs.
101 unique properties and is both protected from deadenylation and undergoes deadenylation-independent de
103 nslational repression occurs before complete deadenylation, and disrupting deadenylation with use of
104 untranslated region and recruits decapping, deadenylation, and exonucleolytic enzymes to PBs for RNA
105 ranslational repression precedes target mRNA deadenylation, and identify GW182, PABP, and deadenylase
108 Aly appears to protect the poly(A) tail from deadenylation, and REF/Aly-stabilized transcripts are fu
110 The model results reveal the rhythmicity in deadenylation as the strongest contributor to the rhythm
111 role for ubiquitin in regulating MHC-I mRNA deadenylation as ubiquitination of CNOT7 by MEX-3C regul
113 tion assays and in cell-free RNA binding and deadenylation assays, suggesting that it may play roles
114 P domain) of PAB1 substantially reduces CCR4 deadenylation at non-PUF3-controlled mRNA and correspond
119 nhibition of 3' cleavage, strongly activates deadenylation by PARN in the presence of CstF-50, and th
121 ng its CNBD could still activate target mRNA deadenylation by purified recombinant Schizosaccharomyce
122 ent model was proposed in which TOBs promote deadenylation by recruiting CAF1-CCR4 deadenylase comple
123 so implicated in mediating the repression of deadenylation by the 3' UTR of another alphavirus, Venez
125 hat reduced translation, while not affecting deadenylation by themselves or when combined with ccr4De
127 mRNA was stabilized in mutants defective in deadenylation (ccr4Delta), mRNA decapping (dcp1), and th
131 tin ligases, associates with the cytoplasmic deadenylation complexes and ubiquitinates CNOT7(Caf1), t
132 the predominant effect of microRNA-mediated deadenylation concurrently shifts from translational rep
133 em zinc finger domain; it then promotes mRNA deadenylation, considered to be the rate-limiting step i
135 of mRNA decay enzymes, and help explain how deadenylation, decapping, and exonucleolytic decay can a
137 AREs have been shown to directly activate deadenylation, decapping, or 3'-to-5' exonucleolytic dec
138 anding/assembly" platform for formation of a deadenylation/decay mRNA-protein complex on an mCRD-cont
140 A degradation and repress expression by both deadenylation-dependent and -independent mechanisms, usi
141 Thus, human PUMs are repressors capable of deadenylation-dependent and -independent modes of repres
143 h1 specifically affects mRNA turnover in the deadenylation-dependent decay pathway, but does not act
145 ound that while Olfr mRNAs are degraded by a deadenylation-dependent mechanism, they are largely prot
147 nd other components of the Lsm1p-Lsm7p/Pat1p deadenylation-dependent mRNA decapping complex were also
148 ody-associated 5' to 3' mRNA decay pathways, deadenylation-dependent mRNA decay (DDD) and nonsense-me
155 pathways of eukaryotic mRNA decay occur via deadenylation followed by 3' to 5' degradation or decapp
156 yotic mRNA decay proceeds through an initial deadenylation followed by 5' end decapping and exonucleo
157 f eukaryotic mRNA degradation initiates with deadenylation followed by decapping and 5' to 3' degrada
158 t, a major pathway of mRNA decay begins with deadenylation followed by decapping and 5'-3' exonucleas
159 major pathway for mRNA decay is initiated by deadenylation followed by decapping and 5'-3' exonucleol
160 sequence-specific manner, resulting in mRNA deadenylation followed by exonucleolytic decay, mRNA end
161 e generalized process of mRNA decay involves deadenylation followed by release from translating polys
162 ic messenger RNA (mRNA) turnover begins with deadenylation, followed by decapping and 5' to 3' exonuc
163 athway of mRNA decay in yeast initiates with deadenylation, followed by mRNA decapping and 5'-3' exon
164 ivity, this activity is not required for its deadenylation function in vivo, and CCR4 is the primary
168 ings highlight the critical role of rhythmic deadenylation in regulating poly(A) rhythms and circadia
170 Stabilization occurs as a result of slower deadenylation in the ssa1(ts) strain, suggesting that Hs
172 ) interact with the polyA tail, (ii) inhibit deadenylation in vitro, and (iii) stabilize transcripts
173 he CCF-1/Pop2p deadenylase and can stimulate deadenylation in vitro, and that CCF-1 is partially resp
174 reases stability in vivo but does not affect deadenylation in vitro, comparable to the effects of del
175 nuclease involved in the mCRD-mediated rapid deadenylation in vivo and also associated with UNR.
176 s support the model that the control of CCR4 deadenylation in vivo occurs in part through the removal
177 AF1-specific functional regions required for deadenylation in vivo, we targeted for mutagenesis six r
179 roteins are required for full repression and deadenylation in vivo; their removal dramatically stabil
181 t for both protection from deadenylation and deadenylation-independent decapping and an extended poly
183 pts are efficiently recognized, targeted for deadenylation-independent decapping, and show NMD trigge
186 ion codons (nonsense mRNAs) are targeted for deadenylation-independent degradation in a mechanism tha
192 Transcript is stabilized when accelerated deadenylation is impeded by blocking translation initiat
200 gradation appears to occur primarily through deadenylation-linked mechanisms, with little contributio
205 s suggest that inhibition of splicing and/or deadenylation may be effective therapies for Lsm1-over-e
209 ly(A) tail exacerbate dependency on PABP for deadenylation, more potent miRNA-binding sites partially
210 se results support a dynamic interplay among deadenylation, mRNP remodeling, and P-body formation in
213 binds to RNAs containing AREs, and promotes deadenylation of a model ARE transcript in a cell-based
215 TTP and its related proteins stimulated the deadenylation of ARE-containing, polyadenylated transcri
216 TTP may remain poised to rapidly reactivate deadenylation of bound transcripts to downregulate gene
217 hypothesis where mTOR is the tag, preventing deadenylation of CaMKIIalpha mRNA, whereas HuD captures
219 ne hydrolase (MTAN) catalyzes the hydrolytic deadenylation of its substrates to form adenine and 5-me
220 limits expression of specific genes through deadenylation of mRNA poly(A) tails, enabling positive s
222 nopus oocytes and early embryos and prevents deadenylation of mRNAs, suggesting its importance in the
224 on and decay in nuclear extract and prevents deadenylation of naked RNA by a purified deadenylase, li
226 e, we reconstitute accelerated and selective deadenylation of RNAs containing AU-rich elements (AREs)
231 cytoplasmic deadenylases and promotes rapid deadenylation of target mRNAs both in vitro and in cells
233 by p38 MAPK was found to be specific because deadenylation of the beta-globin reporter mRNA either la
237 s, and this has been shown to be mediated by deadenylation of the mRNA and inhibition by the Bruno re
238 ion intermediates revealed that the complete deadenylation of the mRNA triggers its decapping and dec
240 o be due to inhibition of polyadenylation or deadenylation of the transcript, followed by exosomal de
241 veals that miRNAs cause not only accelerated deadenylation of their targets but also accelerated deca
242 em CCCH zinc finger protein family, promotes deadenylation of tumor necrosis factor-alpha and granulo
248 decay process of this mRNA, dTIS11 enhances deadenylation performed by the CCR4-CAF-NOT complex whil
253 and correspondingly blocked eIF4E effects on deadenylation, PUF3 essentially bypassed this P domain r
254 denylated mRNAs, enabling the large range in deadenylation rate constants to impart a similarly large
255 lasm, they have a broad (1000-fold) range of deadenylation rate constants, which correspond to cytopl
256 o shape maternal mRNA stability by affecting deadenylation rate in a translation-dependent manner.
258 the p38 MAPK pathway predominantly regulates deadenylation, rather than decay of the mRNA body, and t
260 ecapping, and show NMD triggered accelerated deadenylation regardless of the position of the nonsense
264 MicroRNAs regulate gene expression through deadenylation, repression, and messenger RNA (mRNA) deca
265 The ability of TTP to promote transcript deadenylation required Mg(2+), but not ATP or prior capp
271 e fate of mammalian mRNA is modulated at the deadenylation step by a protein that recruits poly(A) nu
273 mediated by the mCRD, demonstrating that the deadenylation step is coupled to ongoing translation of
274 ii) the hCaf1z subunit, in addition to rapid deadenylation, subjects substrate RNAs to slow exonucleo
275 thway, a nonsense codon triggers accelerated deadenylation that precedes decay of the PTC-containing
276 onsisting of a cycle of oligoadenylation and deadenylation that regulates the production of mature hu
277 ntify a new role for ubiquitin in regulating deadenylation, the initial and often rate-limiting step
278 y conserved PUF proteins stimulate CCR4 mRNA deadenylation through binding to 3' untranslated region
279 ese results imply that CAF1, while affecting deadenylation through its contact to CCR4, has functions
280 ed for P body formation, viral inhibition of deadenylation, through Pan3 degradation, is a potential
281 quired for binding CCR4, reduced the rate of deadenylation to a lesser extent and resulted in in vivo
283 he genes in vertebrates, where they regulate deadenylation, translation, and decay of the target mess
289 tion initiation factor known to control CCR4 deadenylation, was shown to affect PAN2 activity in vivo
292 hanisms: repression by Puf4p is dependent on deadenylation, whereas repression by Mpt5p can occur thr
293 which binds only to monomeric Orb2, promotes deadenylation, whereas the putative poly(A) binding prot
294 In mammalian cells, mRNA decay begins with deadenylation, which involves two consecutive phases med
295 However, little is known about rice mRNA deadenylation, which is an important regulation step of
297 ne major pathway for mRNA turnover occurs by deadenylation, which leads to decapping and subsequent 5
300 efore complete deadenylation, and disrupting deadenylation with use of an internal polyadenylate tail