ライフサイエンスコーパス: domestication

1 mestication, the targets of selection during domestication).

2 erent contexts: urbanization, captivity, and domestication.

3 ionary novelty, species adaptation, and crop domestication.

4 that this metabolic diversity predates rice domestication.

5 sition from dioecy to hermaphroditism during domestication.

6 ncrease sugar sink potency during watermelon domestication.

7 ild upon existing regulatory networks during domestication.

8 ve evolved distinct genetic solutions toward domestication.

9 rocess of wheat and barley (Hordeum vulgare) domestication.

10 ent, and under intense selection during crop domestication.

11 uses of extinctions and dynamic processes of domestication.

12 odel for understanding both ERV fate and cat domestication.

13 and the allelic variants selected since its domestication.

14 e Spanish' supported a one-step operation of domestication.

15 and whose divergence may be a consequence of domestication.

16 the TomLoxC promoter selected against during domestication.

17 the locus determining seed coat color during domestication.

18 s and phylogeographic shifts, and undergoing domestication.

19 rans regulatory changes under divergence and domestication.

20 esting they were targets of selection during domestication.

21 nventions of humanity through the process of domestication.

22 enotype, with a much smaller contribution of domestication.

23 population structure, genetic diversity, and domestication.

24 J1-H1 indicating a genetic bottleneck during domestication.

25 ecific hybridization in yeast adaptation and domestication.

26 ed crops, particularly the ones under single domestication.

27 focused primarily on the process of initial domestication.

28 cture, and epigenome changes associated with domestication.

29 erstand how woody perennial crops respond to domestication.

30 that feralization is not a mere reversal of domestication.

31 ge seeds has been a main target during plant domestication.

32 loss of seed shattering during African rice domestication.

33 prior to domestication and the other during domestication.

34 atterns of development and growth during dog domestication.

35 The third mystery concerns the cost of domestication.

36 sights into the shared evolutionary basis of domestication.

37 largely through changes at loci unrelated to domestication.

38 into the biological pathways modified during domestication.

39 ze control potentially shared in disease and domestication.

40 genetic diversity, population structure, and domestication.

41 an annual life cycle may have contributed to domestication.

42 ch probably led the commensal pathway to cat domestication.

43 l inactive Ty3/Gypsy elements are undergoing domestication.

44 identify and refine important loci linked to domestication.

45 y is considered a major factor in successful domestication.

46 kedly different fitness landscape imposed by domestication.

47 ucture, providing a skeletal marker of early domestication.

48 nother were instrumental in subsequent mysid domestication.

49 the best known experimental study in animal domestication.

50 s phenotypic consequences for adaptation and domestication.

51 in the maintenance of atavistic traits under domestication.

52 es that are typically in the early stages of domestication.

53 nd have considerably changed models of horse domestication.

54 hromosomal lineages that both occurred after domestication 5,500 years ago.

55 Post-domestication adaptation during the expansion of crops f

56 eld novel insights into our understanding of domestication, adaptation, and speciation.

57 ve an important impact on the basic study of domestication, affecting estimates of several evolutiona

58 Roots have been omitted from previous domestication analyses owing mostly to their subterranea

59 rains (n = 5) that varied in their extent of domestication and assessed rhizosphere and root endosphe

60 Maize domestication and breeding have resulted in drastic and

61 s representing three different stages in the domestication and breeding process (wild trees, landrace

62 Domestication and breeding selection have progressively

63 atures of genetic divergence associated with domestication and breeding were widespread in the genome

64 opmental pathways that were major targets in domestication and breeding, we highlight how epistasis i

65 s between the selection pressures exerted by domestication and by urbanization.

66 de the reduction of genetic diversity during domestication and counteracting factors, a discussion of

67 ggest that despite the double bottlenecks of domestication and de-domestication, weedy rice nonethele

68 plant tissues, researchers have probed plant domestication and dispersal, plant evolution and ecology

69 the advent of fresh perspectives on how crop domestication and diversification proceed.

70 rehistory of wild potato use, leading to its domestication and diversification, has been well-documen

71 w that different genes were selected in each domestication and ecogeographic race.

72 Towards this goal, we report the domestication and engineering of a scCO(2)-tolerant stra

73 egulatory gene that has been selected during domestication and genetic improvement for geographic exp

74 l microbiomes to examine the extent to which domestication and human management in the past affected

75 evidence supporting that distinct phases of domestication and improvement have led to an increase in

76 ts, driving new insights into the evolution, domestication and improvement of crops.

77 evolution of fruit size has accompanied the domestication and improvement of fruit-bearing crop spec

78 causal variants that underlie traits for the domestication and improvement of soybean, serving as a b

79 Despite bottlenecks associated with domestication and improvement, low-cost resistance allel

80 of regions/genes potentially selected during domestication and improvement, some of which likely cont

81 umber of SVs have been selected during peach domestication and improvement, which together affect 226

82 tents have been impacted by selection during domestication and improvement, while sugar content has u

83 lated QTLs were successively selected for by domestication and improvement, with more QTLs selected f

84 have been under selection during speciation, domestication and improvement.

85 lection of genes and promoters during tomato domestication and improvement.

86 Q should further our understanding of wheat domestication and improvement.

87 vor has changed over the course of long-term domestication and intensive breeding.

88 als of all four species to better understand domestication and introgression between the llama and al

89 d that mPing bursts are restricted to recent domestication and is likely due to the accumulation of t

90 plexity of regulatory evolution during fiber domestication and may facilitate new approaches for impr

91 y hypotheses, such as those surrounding self-domestication and norm psychology; and we consider the r

92 cial cognition of dogs have been affected by domestication and ontogeny.

93 overing the genetic pathways responsible for domestication and plant improvement.

94 y offers insights into spinach evolution and domestication and provides resources for spinach researc

95 The domestication and subsequent global dispersal of livesto

96 one in the quest to unravel the processes of domestication and the following adaptation of domesticat

97 two major events with one occurring prior to domestication and the other during domestication.

98 Domestication and the subsequent evolution under cultiva

99 n and its influence on the processes of crop domestication and varietal diversification are poorly un

100 ts of introgression on the processes of crop domestication and varietal diversification.

101 shown by recent studies to be important for domestication and/or yield in other grasses function dif

102 investigating genetic approaches for de novo domestications and major crop 'rewildings'.

103 n activities, including recurrent migration, domestication, and breed development of bovid and canid

104 hope hypothesis: population mobility, animal domestication, and food-wasting visibility.

105 over ~60 million years of naturally selected domestication, and laboratory experiments showed that an

106 tion disrupt plant-microbial symbiosis under domestication, and review the wealth of new data interro

107 Fruit size was predominantly selected during domestication, and selection for large fruits has led to

108 some of the genomic changes occurring during domestication, and, help to predict the evolutionary con

109 s interspecific hybridization during soybean domestication appear to have contributed to a rapid vari

110 Maize and rice domestication appears to be associated with distinct reg

111 controlling clock output traits during crop domestication are also discussed.

112 way, by which many common examples of animal domestication are hypothesized to have evolved.

113 sms of evolution, speciation, hybridization, domestication, as well as about the molecular machinerie

114 We hypothesized that domestication-associated changes in common bean (Phaseol

115 Maize (Zea mays ssp. mays) domestication began in southwestern Mexico ~9,000 calend

116 Although it is widely assumed that fish domestication began much later than the domestication of

117 cesses of interest (e.g. the strength of the domestication bottleneck, the timing of domestication, t

118 may be past and potential future targets of domestication, breeding, and selection.

119 ts due to urbanization is similar to that of domestication but occurs 3 times more slowly.

120 es, with limited gene flow from wolves since domestication but substantial dog-to-wolf gene flow.

121 ion factor gene Q has played a major role in domestication by conferring the free-threshing character

122 a critical step in mediating the effects of domestication by tb1.

123 nsion, termed awnletted, has occurred during domestication by way of loci that dominantly inhibit awn

124 sweet kernel phenotype, a key agronomic and domestication character for almond.

125 enome editing, genomic selection and de novo domestication could be galvanized by using speed breedin

126 mango genetic diversity and examine how post-domestication dispersal shaped the geographical distribu

127 nome identifies a rare example of convergent domestication down to the same mutation having independe

128 Selection and domestication drive parallel gene expression similaritie

129 uire convergent phenotypes in maize and rice domestication, during which different central genes were

130 llections can greatly enhance plant breeding/domestication efforts and support plant genetic resource

131 his is the first observation of a phage gene domestication event in which a toxic phage gene has been

132 Our results suggest that three independent domestication events occurred in melon, two in India and

133 viously supposed, perhaps including multiple domestication events, hybridization and regional selecti

134 rovide evidence showing asymmetric subgenome domestication for directional selection of long fibers.

135 flect artificial selection in the process of domestication for increased juvenile-like behavior in th

136 g of 52 accessions suggests that independent domestications formed peanut ecotypes.

137 We review insights on their domestication from new phylogenies, archaeology and geno

138 bean semi-determinacy is modulated by a post-domestication gain-of-function mutation in the gene, Dt2

139 Most known domestication genes from other cereal models however hav

140 C(4) grasses, and use the resource to probe domestication genes in the close crop relative foxtail m

141 This indicates that domestication genes need to be understood within the arc

142 We identified hundreds of candidate domestication genes with drastically lowered genomic div

143 These include testing how 'domestication genes' act in wild settings, studying the

144 of selective sweeps in previously identified domestication genes, as well as evidence of recent selec

145 tract lengths may be adaptive within certain domestication habitats.

146 The process of evolution under domestication has been studied using phylogenetics, popu

147 m, yet much of our foundational knowledge of domestication has come from studies investigating relati

148 Crop domestication has fundamentally altered the course of hu

149 The extent to which plant domestication has impacted the underlying genetics of pl

150 laboratory rat thrives in captivity, and its domestication has produced many inbred and outbred lines

151 Domestication has resulted in reduced salt tolerance in

152 Phenotypic selection during animal domestication has resulted in unwanted incorporation of

153 Plant domestication has strongly modified crop morphology and

154 Domestication has transformed hundreds of wild plant spe

155 This places tb1 on top of the domestication hierarchy, demonstrating its critical impo

156 t the biogeography of Poaceae, untangle crop domestication history and detect past vegetation shifts.

157 ther crops for better understanding of their domestication history and use in improvement.

158 This study sheds light on the domestication history of melon and provides a valuable r

159 wild rubber trees despite a relatively short domestication history of rubber tree, some of which are

160 on between morphology, genetic identity, and domestication history.

161 te the evolution of cotton genomes and their domestication history.

162 litated a deep understanding of the tomato's domestication history.

163 ration of diverse phenotypes in the goldfish domestication history.

164 During crop domestication, human farmers traded greater productivity

165 A number of domestication hypotheses suggest that dogs have acquired

166 tifies alleles under selection during tomato domestication, improvement and modern breeding, and disc

167 of morphological phenotypes associated with domestication in a nonhuman primate.

168 nd asexual reproduction, polyploidy and host domestication in A. candida specialization on distinct p

169 vented the documentation of incipient animal domestication in archaeology.

170 we discuss and update key concepts in animal domestication in light of recent contributions from anci

171 The study of cucurbit domestication in recent years has benefitted from the in

172 w how seed quality may have been impacted by domestication in term of protein profiles and alkaloid c

173 Genomic signatures of domestication in the llama include male reproductive tra

174 After domestication in the Near East around 10,000 years ago s

175 re of prokaryotic soil microbiota after soil domestication, including to what extent crop plants impa

176 predicting the evolutionary consequences of domestication-introgression in wild populations.

177 Domestication is a co-evolutionary process that occurs w

178 s into plant domestication - that in general domestication is a protracted process, that unconscious

179 Domestication is at its heart an evolutionary process, a

180 y, the timing, location, and manner of their domestication is contentious.

181 Although the species emerged in Ecuador, domestication is likely to have occurred in Mexico whenc

182 Domestication is one of the strongest examples of artifi

183 Domestication is the process by which organisms become a

184 cement of residue 848 by arginine during RAG domestication led to suppression of transposition activi

185 y, TB1 also putatively targets several other domestication loci, including teosinte glume architectur

186 We also investigated five domestication loci.

187 ors and potential singular origin during dog domestication make them an attractive, but elusive, subj

188 indicating that artificial selection during domestication may have acted independently on the same r

189 s-of-function, coding variation, while maize domestication more frequently favored standing, gain-of-

190 Cattle domestication occurred at least twice independently and

191 Domestication of a transposon (a DNA sequence that can c

192 tices like these likely played a role in the domestication of animals - including the chicken - in si

193 The domestication of animals led to a major shift in human s

194 ur results indicate an independent centre of domestication of Cavia in the eastern Colombian Highland

195 ot Jewish ritual [5] illuminates the path of domestication of Citron, the first citrus species to be

196 Domestication of clonally propagated crops such as pinea

197 ecombination and a one-step operation in the domestication of clonally propagated crops.

198 n shape both in natural evolution and in the domestication of crops [5-9].

199 evolution of novel phenotypes and the human domestication of crops, the majority of the mutations th

200 Domestication of cultivated tomato (Solanum lycopersicum

201 layers in the evolution of fruit size in the domestication of cultivated tomatoes.

202 new traits in mammals, often accompanied by domestication of EREs themselves.

203 Domestication of fruit and seed crops ignited the format

204 n ancient gene duplication that impacted the domestication of fruit size.

205 fish domestication began much later than the domestication of land animals, the evidence is largely n

206 nstrating its critical importance during the domestication of maize from teosinte.

207 co is recognized as the center of origin and domestication of maize.

208 genetic underpinning of local adaptation and domestication of pistachio.

209 synaptic plasticity, originated through the domestication of retrotransposon Gag genes and mediates

210 Agricultural domestication of soils, that is, the conversion of previ

211 sts in identifying the genes responsible for domestication of some of the most important crops, and h

212 rters in regulating HCN content; (ii) the co-domestication of sweet and bitter cassava major alleles

213 sm and investigated further evidence for the domestication of sweet and bitter cassava.

214 Domestication of the apple was mainly driven by interspe

215 A key step in domestication of the grapevine was the transition from s

216 The domestication of the horse some 5,500 years ago followed

217 chip and harvesting grown material; and (vi) domestication of the ichip-derived colonies for growth i

218 views are probably unjustified, the advanced domestication of the laboratory rat does suggest that re

219 these genetic mechanisms helped to favor the domestication of the polyploid A. hypogaea over other di

220 conic goldfish phenotypes and illuminate the domestication of these diverse strains following genome

221 Our data provide an example of the molecular domestication of these elements which, by distributing P

222 enomic insights into the divergence and dual domestication of these two important cultivated tetraplo

223 nto the principles that govern the molecular domestication of transposons.

224 The domestication of wild emmer wheat led to the selection o

225 ne transcription, demonstrate the effects of domestication on cis-regulatory divergence.

226 d ancestor of maize, and the consequences of domestication on genetic architecture.

227 Here, we examine the impacts of domestication on genetic diversity in a tropical perenni

228 ive specific emphasis to the impact of plant domestication on microbiome assembly and how insights in

229 Although the impacts of crop domestication on specialist pathogens are well known, le

230 sonance imaging to investigate the impact of domestication on the canine cortical surface, we compare

231 ly been proposed as an early centre of plant domestication, on the basis of molecular markers that sh

232 extinct horse lineages existed during early domestication, one at the far western (Iberia) and the o

233 ty of regulatory evolution accompanying crop domestication, particularly for polyploid plants.

234 nce that, in marmoset monkeys, the size of a domestication phenotype-a white facial fur patch-is link

235 s, adaptive evolutionary plasticity, and the domestication process may play in the organization and c

236 skills pointing to the possibility that the domestication process might have uniquely altered their

237 Little is known about the effects of the domestication process on the evolution of the sweet cher

238 aquaculture species and at all stages of the domestication process to optimize selective breeding.

239 ants themselves are important drivers of the domestication process, acting through selective enrichme

240 Thus, despite the domestication process, llamas have not lost the ability

241 en targeted by positive selection during the domestication process, setting up the background for sig

242 y of the similarities and differences in the domestication processes of maize and rice, two major sta

243 e discuss how the knowledge gained from past domestication processes, together with emerging technolo

244 Plant domestication provides a unique model to study genome ev

245 omic regions underlying selective sweeps and domestication quantitative trait locus (QTL).

246 000 years ago and suggest that key genes for domestication related to tree and seed size experienced

247 gressed variation by recurrent selection for domestication-related QTL and associated genomic regions

248 correlations, and genetic covariances for 18 domestication-related traits using realized genomic rela

249 on of the methylation landscape during maize domestication remain largely unknown.

250 the ecological circumstances that facilitate domestication remain uncertain.

251 ring plants, but its impact on selection and domestication remains elusive.

252 virus (ALV) has endogenized prior to chicken domestication, remains infectious, and threatens poultry

253 To understand the process of domestication requires a more comprehensive approach foc

254 thylation may play a mechanistic role in the domestication response.

255 Horse domestication revolutionized warfare and accelerated tra

256 ed in wheat for allelic variants targeted by domestication selection and select targets for engineeri

257 ss of diversity around TaGW7-associated with domestication selection, suggesting that TaGW7 is likely

258 Domestication shaped wolves into dogs and transformed bo

259 wed that ant farmers representing subsequent domestication stages strictly regulate protein harvest r

260 Domestication started c.

261 owever, the genetic basis and history of its domestication still remain largely unknown.

262 We identified 11 domestication sweeps and five breeding sweeps covering,

263 We scanned 93 domestication sweeps occupying 74 Mb of the A subgenome

264 A considerable fraction of the domestication sweeps overlaps with those detected in the

265 We detected two independent sets of domestication sweeps, resulting in diverse characteristi

266 as a secondary improvement center where the domestication syndrome became fixed and new lineages eme

267 the Farm-Fox Experiment and the ubiquity of domestication syndrome have been overstated.

268 The root domestication syndrome in the common bean was associated

269 The domestication syndrome refers to a set of traits that ar

270 nada and critically assess the appearance of domestication syndrome traits across animal domesticates

271 This 'domestication syndrome' has been a central focus of rese

272 genic selection on behavioural traits during domestication, targeting brain-expressed synaptic networ

273 rlying weedy adaptations do not overlap with domestication targets of selection, suggesting that fera

274 plants and represent important breeding and domestication targets, our data highlight the possibilit

275 Rice domestication tended to select de novo, loss-of-function

276 est that mango has a more complex history of domestication than previously supposed, perhaps includin

277 rsica) has undergone more than 5000 years of domestication that led to remarkable changes in a series

278 I discuss four new insights into plant domestication - that in general domestication is a protr

279 sed considerable genetic constraint on early domestication, the maize landrace G-matrix indicates tha

280 the domestication bottleneck, the timing of domestication, the targets of selection during domestica

281 ata suggest that dioecy has been lost during domestication through a rare recombination event between

282 Soil domestication through continuous monoculture cultivation

283 of new genes/alleles is a hallmark of apple domestication through hybridization.

284 evolutionary adaptation acquired during RAG domestication to inhibit transposition.

285 We found a similar domestication trade-off across the major co-evolutionary

286 ene that regulates seed weight, an important domestication trait, by transcriptional regulation and m

287 We uncover epigenomic signatures of domestication traits during cotton evolution.

288 me evolution and the genetic architecture of domestication traits, along with resources supporting re

289 rogenitors and are associated with important domestication traits.

290 properties, and genomic loci responsible for domestication traits.

291 SVs) underlie important crop improvement and domestication traits.

292 guides the exploration of sexual and asexual domestication trajectories in other clonally propagated

293 Here we show that, in only 33,000 y, domestication transformed the facial muscle anatomy of d

294 g regional to global-scale studies of mammal domestication, translocation, and distribution.

295 These results are consistent with domestication via the commensal pathway, by which many c

296 e double bottlenecks of domestication and de-domestication, weedy rice nonetheless shows genetic flex

297 Selection intensities during domestication were weak for all traits, with reproductiv

298 as a major molecular event during watermelon domestication, which results in the truncation of 45 ami

299 apparently was a trait favoured early during domestication, with genomic data showing how bitterness

300 A greater understanding of crop domestication would provide a theoretical basis for how