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1 dsRNA binding induces allosteric structural changes in O
2 dsRNA molecules targeting the cp gene of ToMV were topic
3 ontaining a genetically engineered segment 7 dsRNA.IMPORTANCE Previous studies generated recombinant
4 toplasm triggers host defence mechanisms(9), dsRNA viruses retain their genomes within a core particl
6 e antiviral activity of DHX30 and contains a dsRNA-binding domain, and that the NS1-DHX30 interaction
7 ydomonas reinhardtii for the expression of a dsRNA cassette targeting a shrimp yellow head viral gene
11 ADAR RNA editing enzymes are high-affinity dsRNA-binding proteins that deaminate adenosines to inos
12 ly in its antagonism of type I IFN, but also dsRNA-mediated mitochondrial apoptosis.Importance Respon
16 o-noise ratio in cellular force imaging, and dsRNA-based tension sensor exhibited strong non-specific
17 eled mRNA-specific anti-sense RNA probes and dsRNA-binding protein to identify the expression of spec
20 y was to use microalgae expressing antiviral dsRNA as a sustainable feed supplement for shrimp offeri
21 xpectedly discovered that ADAR proteins bind dsRNA substrates tandemly in vivo, each with a 50-bp foo
22 ngly, the capacity of sigma3 protein to bind dsRNA does not impact its capacity to diminish productio
25 Although nc886 inhibited PKR activation by dsRNA, it was required for PKR phosphorylation during T
26 ivation of MDA5/MAVS signaling was driven by dsRNA from live A. fumigatus serving as a key vitality-s
27 ence- and structure-specifically enhanced by dsRNAs, including the influenza viral RNA panhandle dupl
28 ) in human infant AECs exposed to (poly(I:C) dsRNA) under different experimental conditions (n = 8 do
29 rated independently of SGs and the canonical dsRNA-induced SG biogenesis pathway, because RLBs did no
31 labeled dsRNA, we demonstrate that chitosan/dsRNA polyplex nanoparticles are considerably more effec
33 prisingly, we found that both enzymes cleave dsRNA at preferred sites, among which a guanine nucleoti
35 phenotype was found in a subset of PAMAM-CNT-dsRNA(alphatub) injected larvae, relative to the level s
36 double-stranded RNA bound to CNTs (PAMAM-CNT-dsRNA), compared to those injected with target dsRNA alo
40 ified TRIM28 potentiates canonical cytosolic dsRNA-activated IFN-mediated defenses that rely on RIG-I
41 However, the structure of a pre-unwound D1D2:dsRNA complex remains elusive, and thus, the mechanism o
42 anded RNA complex, and the structure of a D2:dsRNA complex that is thought to represent a pre-unwound
44 s to the functional forms of plant-delivered dsRNA for the protection of transgenic maize from WCR fe
45 nonself RNA sensors recognize virus-derived dsRNA as danger signals and initiate innate immune respo
46 ncies in ADAR1 (which edits and destabilizes dsRNA), PDE12 or AKAP7 (which degrade 2-5A), or by ioniz
48 the sensing of double-stranded RNA and DNA (dsRNA/dsDNA) followed by IFNalpha/beta secretion and tra
49 lexes: double-stranded DNA (dsDNA), PNA/DNA, dsRNA (modified RNA) and PNA/RNA, were tested and evalua
52 o acids (molecular mass of 62.7 kDa); dsRNA2 dsRNA is 1,524 bp in length with an ORF that encodes 434
54 ide new information on VF trafficking during dsRNA virus coinfection, we rescued two recombinant infe
56 6)A modification protects against endogenous dsRNA formation and a deleterious innate immune response
61 t, whereas SIDT1 can transport extracellular dsRNA into the cytoplasm following endocytosis in vitro,
62 gest that the use of functionalised CNTs for dsRNA delivery could increase the efficacy of RNA interf
63 ctivated (PKR) is a cytoplasmic receptor for dsRNA, and as such is involved in detection of viral inf
64 lasers induce gene expression signatures for dsRNA and RA, with measurable increases in intrinsic RA
69 athogen-associated molecular patterns (e.g., dsRNA) activate expression of IFN-stimulated genes (ISGs
70 SE 2, which partners with Pol IV to generate dsRNA precursors of the 24 nt siRNAs that guide RdDM.
74 results have important implications for how dsRNA sensing is important outside of immune pathways.
75 animal model for osteomyelitis and identify dsRNA as a new treatment target for this debilitating bo
77 NP degrades virus-derived, immunostimulatory dsRNA in biochemical assays to eliminate the danger sign
80 c primers revealed a lower infection rate in dsRNA-expressing algae treated shrimp (55.6 +/- 11.1%) c
81 immune activation, but the role of SIDT1 in dsRNA transport and in the innate immune response to vir
84 X4-induced transcripts and from DUX4-induced dsRNA-forming intergenic transcripts enriched for endoge
87 hylococcus isolated from chicken BCO induces dsRNA accumulation and cell death in human osteoblast ce
88 we confirm the ability of N(pro) to inhibit dsRNA-mediated apoptosis and show that N(pro) is also ab
90 rter and is required to traffic internalized dsRNA from endocytic compartments into the cytosol for i
91 a cells selectively respond to intracellular dsRNA by expressing type I interferons (IFNs) and induci
93 tosan/dsRNA polyplex nanoparticles introduce dsRNA into cells via a different mechanism than the cano
96 rough a mechanism that is independent of its dsRNA binding capacity.IMPORTANCE We use mammalian reovi
98 henotype and uptake of fluorescently labeled dsRNA, we demonstrate that chitosan/dsRNA polyplex nanop
101 sosomal compartment, interacts with the long dsRNA analog poly(I:C), and, when overexpressed, enhance
104 e successfully developed nucleobase-modified dsRNA-binding PNAs (dbPNAs) to facilitate structure-spec
105 JUNV and MACV NPs also have the ExoN motif, dsRNA readily accumulated in infected cells and often co
106 of JUNV and MACV also harbor the ExoN motif, dsRNA readily formed during JUNV and MACV infections, ac
110 When we applied a low amount of dsRNA (1 ng(dsRNA)/g(soil)) to the soils, we observed that a greater
111 RNAs co-localized with DUX4-induced nuclear dsRNA foci and with intranuclear aggregation of EIF4A3 a
116 ells can either receive different amounts of dsRNA from the same source or use different RdRPs to per
118 3 ribonucleotides upstream and 7 or 8 bp of dsRNA downstream of the cleavage site, and bacterial End
121 applied to assess the environmental fate of dsRNA biopesticides at concentrations relevant to their
122 necessitates an understanding of the fate of dsRNA molecules in receiving environments, among which a
123 oils, we observed that a greater fraction of dsRNA was adsorbed to and extractable from soil particle
126 eetle feeding bioassay for oral ingestion of dsRNA, we measured the expression and demonstrated knock
127 An unusual crystal lattice interaction of dsRNA with its symmetry mate is reminiscent of the RNA a
128 concentrations as low as a few nanograms of dsRNA per gram of soil by both Cerenkov counting (to qua
130 The encapsulation efficiency, protection of dsRNA from nucleases, cellular uptake, in vivo biodistri
132 ucture-specific and selective recognition of dsRNA over single-stranded RNA (ssRNA) and dsDNA regions
136 f the primitive keratin 7 and a signature of dsRNA sensing, including the double-stranded RNA (dsRNA)
140 vement of the primer, the primer terminus of dsRNA is not blocked from reaching the active site of RT
143 Nase IIIs, we performed in vitro cleavage of dsRNAs by Ec and Aquifex aeolicus (Aa) enzymes and delin
144 ng impedes MDA5 sensing and sequestration of dsRNAs encoding membrane proteins, which promote ER home
145 NA editing by adenosine deaminases acting on dsRNA (ADAR) has become of increasing medical relevance,
147 nitially, RV-induced IFN responses depend on dsRNA receptor activation and then are amplified via IFN
149 c-Abl activity, DNA-RNA hybrid formation or dsRNA processing impairs CTD Y1P foci formation, attenua
150 nding on its location, suggesting that other dsRNA features are necessary for correct presentation of
151 d by phosphorimaging (to detect intact (32)P-dsRNA and its (32)P-containing degradation products).
153 f a D1D2 core in complex with a 23-base pair dsRNA at pre-unwound state, revealing that two DDXs reco
154 AF3IP3 suppresses cytosolic poly(I:C), 5'ppp-dsRNA, and vesicular stomatitis virus (VSV) triggers IFN
158 e field-applicable approach able to quantify dsRNA biopesticides down to environmentally relevant con
159 nments, we developed an approach to quantify dsRNA in agricultural soils using quantitative reverse t
160 ach using phosphorus-32 ((32)P)-radiolabeled dsRNA that allows studying key fate processes of dsRNA i
163 , we discovered that LASV potently restricts dsRNA accumulation during infection and minigenome repli
164 by exogenous delivery of double-strand RNA (dsRNA) it is necessary to understand the generation of s
166 receptors detect viral double-stranded RNA (dsRNA) and 5'-triphosphorylated RNA to activate the tran
167 ne sensors of cytosolic double-stranded RNA (dsRNA) and play a critical role in limiting viral infect
169 y of directly targeting double-stranded RNA (dsRNA) by triplex-formation is relatively underexplored
170 says (IFA) specific for double-stranded RNA (dsRNA) demonstrated the presence of double-stranded vira
171 berrant accumulation of double-stranded RNA (dsRNA) due to increased sensor levels (MDA5, RIG-I and P
173 n hub that involves the double-stranded RNA (dsRNA) editing enzyme adenosine deaminase RNA specific (
176 iruses with a segmented double-stranded RNA (dsRNA) genome that replicate in discrete cytoplasmic vir
179 how increased levels of double-stranded RNA (dsRNA) in infected bone in a Staphylococcus-induced chic
182 n of viral proteins and double-stranded RNA (dsRNA) is inhibited in infected neurons in resistant mou
187 sensing, including the double-stranded RNA (dsRNA) receptor DExD/H-Box Helicase 58 (DDX58/RIG-I).
188 icant protection of the double-stranded RNA (dsRNA) replication intermediate against the dsRNA-specif
189 o the activation of the double-stranded RNA (dsRNA) response pathway and the accumulation of intranuc
191 e responses through the double-stranded RNA (dsRNA) sensor MDA5, unleashing endoplasmic reticulum (ER
197 s, and between a fungal double-stranded RNA (dsRNA) virus and an insect virus, in the yeast host.
198 taxon of monosegmented double-stranded RNA (dsRNA) viruses in five planarian species, including the
199 scription characterizes double-stranded RNA (dsRNA) viruses in the Reoviridae, a family that is exemp
200 segmented, multipartite double-stranded RNA (dsRNA) viruses that until recently were only known to in
201 rial RNAs that may form double-stranded RNA (dsRNA), as has been observed in mammalian antiviral resp
202 foreign and endogenous double-stranded RNA (dsRNA), protein kinase R (PKR) and ribonuclease L (RNase
203 to viral RNA, including double-stranded RNA (dsRNA), RIG-I and MDA5 undergo cytosol-to-membrane reloc
205 nd act as inhibitors of double-stranded RNA (dsRNA)-activated protein kinase (PKR) related to innate
207 egulating activation of double-stranded RNA (dsRNA)-dependent protein kinase R (PKR) and recruit the
208 Parallel analyses with double-stranded RNA (dsRNA)-immunostimulated bees revealed these behaviors ar
213 ne deaminases acting on double-stranded RNA (dsRNA)] together with the endogenous RNA interference (R
214 ile genome replication (double-stranded RNA [dsRNA] synthesis) by VP1 occurs within assembly intermed
218 -electron microscopy structures of rotavirus dsRNA-dependent RNA polymerase (RdRp) in two states pert
219 structure of a catalytically active HIV-1 RT/dsRNA complex that mimics the state of the RTIC before t
220 the non-A-tailed transcripts of a segmented dsRNA virus and the transcriptome of the infected cell.
222 ber of the Reoviridae, a family of segmented dsRNA viruses characterized by endogenous RNA transcript
230 suppresses PKR activation despite its strong dsRNA character, and inhibits the crucial antiviral kina
236 e 6 of the Cystoviridae family, we show that dsRNA viruses can adopt a dsDNA-like single-spooled geno
237 artificial diet-feeding study indicates that dsRNAs greater than or equal to approximately 60 base-pa
241 A specific (ADAR), the RNase DICER1, and the dsRNA-activated kinase protein activator of PKR (PACT) m
242 s that the entire type I IFN pathway and the dsRNA-activated kinase, PKR, are required for the lethal
243 able antiviral response was triggered by the dsRNA from a begomovirus genome, suggesting the method i
244 own to antagonise apoptosis triggered by the dsRNA-homolog poly(I:C), however the exact mechanism by
245 also found to be necessary to establish the dsRNA-induced transcriptional and translational programs
246 pressed at each level of signaling, from the dsRNA sensors RIG-I and MDA5, the adaptor MAVS, transcri
248 ion with a virus harboring a mutation in the dsRNA binding domain of sigma3 does not result in enhanc
249 ransposable elements, with activation of the dsRNA sensor RIG-I and interferon regulatory factor (IRF
252 e NS1-DHX30 interaction in vivo requires the dsRNA-binding activity of both DHX30N and the NS1 RBD.
253 sing cryo-electron microscopy to resolve the dsRNA genome structure of the tri-segmented bacteriophag
254 dited PK-15 cell lines were used to show the dsRNA-sensing pathogen recognition receptors (PRRs) TLR3
255 istent with this idea, we also find that the dsRNA binding position is dictated by an established con
257 ed by the NS1 protein, and establish why the dsRNA-binding activity of NS1 is required for its bindin
258 Following challenge of HeLa cells with the dsRNA-analog poly(I:C), PGAM5 oligomers and high levels
259 ogical or autoinflammatory responses through dsRNA sensing and gene-regulatory roles and are controll
260 tal stage, exposure of neonate and adults to dsRNA, exposure of adults to different temperatures, dif
262 sm of sequence-independent binding of Hfq to dsRNA stems, a function that is critical for proper ribo
263 ption of LASV NP ExoN with a mutation led to dsRNA accumulation and impaired LASV replication in mini
267 acutely synthesized by cells in response to dsRNA sensing, which immediately triggered cellular RNA
269 tudy, we show that the beta-cell response to dsRNA, a viral replication intermediate known to activat
276 revealed the distribution of the fed CS-TPP-dsRNA nanoparticles in midgut, fat body and epidermis of
280 es, we also developed a protocol to transfer dsRNA from particles to the extraction buffer by changin
281 , revealing that two DDXs recognize a 2-turn dsRNA, each DDX mainly recognizes a single RNA strand, a
284 hile no protection was achieved when 0-16 ug dsRNA were used, maximum rates of resistance (60 and 63%
289 ipitation studies using biotin-labeled viral dsRNA or poly(I.C) and cell lysate-derived or in vitro t
292 ntercalation of this compound into the viral dsRNA and its interaction with the RNA polymerase of bac
293 tational day 8.5) by administering the viral dsRNA mimic polyinosinic:polycytidylic acid (PolyI:C).
295 -1 can compensate for the lack of RRF-1 when dsRNA from neurons is used to silence genes in intestina
297 experienced reduced aggression compared with dsRNA-immunostimulated bees, facilitating entry into sus
299 n organizations to potentially interact with dsRNA of variable length, providing diversity in viral R