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1 abels a subset of PDX1-expressing pancreatic endoderm.
2 rate between the ventral epidermis and trunk endoderm.
3 and slower aggregation favoring mesoderm and endoderm.
4 le-directed migration and are independent of endoderm.
5 transcriptional program of embryonic foregut endoderm.
6 ge specification, respectively, from foregut endoderm.
7 embryos to investigate the formation of the endoderm.
8 inding Pou5f3 or Nanog in prospective dorsal endoderm.
9 olarity radially from the cluster toward the endoderm.
10 PGCs whether mislocalized or trapped in the endoderm.
11 develop from third pharyngeal pouch (3rd pp) endoderm.
12 mally absent from the presumptive pancreatic endoderm.
13 capable of specifying the entire C. elegans endoderm.
14 ropriate pancreas formation from the foregut endoderm.
15 ox transcription factor Lhx1 in the visceral endoderm.
16 delineates the boundary with the underlying endoderm.
17 and extra-embryonic mesoderm and definitive endoderm.
18 accessible regions that become repressed in endoderm.
19 ntal ontology of the limb bud, or definitive endoderm.
20 osin II (MyoII) activation in the Drosophila endoderm.
21 nce of visceral and primitive streak-derived endoderm.
22 second extra-embryonic tissue, the primitive endoderm.
23 ows maternal nutrient uptake by the visceral endoderm.
24 ingle G protein-coupled receptor, Trapped in endoderm 1 (Tre1), mediates germ cell polarization at th
25 rigins: the gills of cyclostomes derive from endoderm [9-12], while gnathostome gills were classicall
27 Subsequently, lung-biased anterior foregut endoderm (AFE) is specified by sequential inhibition of
28 m and persistent de-epithelialization in the endoderm also arise during local wounding in Hydra, sugg
29 enhanced, giving rise to excess mesoderm and endoderm, an effect that can be rescued by reducing sign
31 B3b coordinates the movements of the hepatic endoderm and adjacent lateral plate mesoderm (LPM), resu
32 tails of the intricate interplay between the endoderm and ALPM during embryogenesis, highlighting why
34 begins by sorting two epithelial cell types, endoderm and ectoderm, into inner and outer layers, resp
36 without maternally provided vg1 fail to form endoderm and head and trunk mesoderm, and closely resemb
39 erwise, lower Wnt signals lead to definitive endoderm and higher Wnt signals induce presomitic mesode
40 trient internalization by the early visceral endoderm and highlight its involvement in the formation
43 In contrast, metastases are enriched for key endoderm and lung-specifying transcription factors, SOX2
45 is, which reinforces the hypothesis that the endoderm and mesoderm in triploblastic bilaterians evolv
48 tlas of liver lineage establishment from the endoderm and mesoderm through to the organization of the
49 astruloids into homogenous subpopulations of endoderm and mesoderm, and comparative analysis of these
50 combinatorial signaling interactions between endoderm and mesoderm, but how these signals are interpr
51 s dorsal-ventral gene expression in both the endoderm and mesoderm, whereas Wnt/beta-catenin acts as
52 SHH signaling is active in both dorsal pouch endoderm and neighboring neural crest (NC) mesenchyme.
54 eny, expand the neuroendocrine repertoire of endoderm and redefine the boundaries of neural crest div
55 rting with the differentiation of hPSCs into endoderm and subsequently into foregut progenitor (FP) c
57 ve the proliferative expansion of the distal endoderm and the underlying mesenchyme during lung branc
58 tional signatures of the epiblast, primitive endoderm and trophectoderm, and identify deeply conserve
59 ary band, in the apical plate and pharyngeal endoderm, and 4-6 serotonergic neurons that are confined
61 d pre-implantation embryos towards primitive endoderm, and inhibiting ERK supports ES cell self-renew
62 for efficient differentiation of pancreatic endoderm, and its absence in individuals with MRS specif
63 erent epithelial populations (skin ectoderm, endoderm, and periderm-like cells in zebrafish), in addi
64 x interactions between the cardiac mesoderm, endoderm, and the rest of the embryo, whereby the risk c
65 gata4/5/6, which are later restricted to the endoderm; and activation of ets1 and erg in the mesoderm
67 helial primordial progenitors of the foregut endoderm are thought to be the developmental precursors
70 sh (the enamel organ) is derived from medial endoderm, as hitherto assumed based on position deep in
71 , in which epiblast cells differentiate into endoderm at two distinct time points-before and during g
72 t direct expression in the anterior visceral endoderm (AVE), primitive streak (PS) and definitive end
73 We conclude that in zebrafish the pharyngeal endoderm becomes overlain by cells with a peridermal phe
74 At the initiation of tracheal development, endoderm begins to express Nkx2.1, and then mesoderm exp
75 pecies can generate neurons from mesoderm or endoderm, but the underlying mechanisms remain unknown.
76 e we delineate the ontogeny of the mammalian endoderm by generating 112,217 single-cell transcriptome
78 ong-term efficacy of hESC-derived pancreatic endoderm cells (PECs) to maintain normoglycemia posttran
84 l chimera studies demonstrate that wild-type endoderm cells within the liver and pancreas can rescue
85 s and embryonic stem cell-derived definitive endoderm cells, screening 7905 distinct DNA sequences.
86 ube assembly, interactions with the adjacent endoderm control the medial movement of cardiomyocytes,
89 nductive interactions between the definitive endoderm (DE) and the surrounding splanchnic mesoderm (S
90 screens to uncover regulators of definitive endoderm (DE) differentiation, which unexpectedly uncove
94 the differentiation of hPSCs into definitive endoderm (DE) using activin A, followed by the generatio
98 Hoxb6 and Hoxc6) leads to a dramatic loss of endoderm-derived endocrine cells, including insulin-secr
99 osa/submucosa enable formation and growth of endoderm-derived human organoids, such as gastric, hepat
100 or amniote hypoxia-sensitive cell evolution: endoderm-derived NECs were retained as PNECs, while the
102 dysmorphic features, choroidal coloboma and endoderm-derived organ malformations in liver, lung and
103 ential for the normal development of several endoderm-derived organs, including the prostate gland(1,
104 ike cells that subsequently cover the entire endoderm-derived pharyngeal epithelium [Rosa et al., 201
105 arising through interactions of an ancestral endoderm-derived proto-pituitary with newly evolved plac
107 that NECs are not neural crest-derived, but endoderm-derived, like PNECs, whose endodermal origin we
108 E1 and HDE2, which stain different stages of endoderm development and distinct derivative cell types.
109 ivation of Lhx1 disrupts anterior definitive endoderm development and impedes node and midline morpho
110 l copy of GATA6 is sufficient for definitive endoderm development and pancreas formation, but it is i
111 ts the basal cell lineage during normal lung endoderm development to allow the proper patterning of e
112 key transcriptional regulator of definitive endoderm development, and yet, its genomic targets remai
115 nct embryonic-abembryonic axes and primitive endoderm differentiation and can initiate the transition
116 nt (TERT) down-regulation, immediately after endoderm differentiation and completely absent in in vit
117 gulates the transcription factors that drive endoderm differentiation and suggest that protein-lncRNA
119 c switching occurs during early mesoderm and endoderm differentiation, high glycolytic flux is mainta
128 derm, ciliated band cells and cells from the endoderm/ectoderm boundary that will give rise both to h
129 drives cell movements in the hindgut-forming endoderm, enabling tissue-scale posterior extension of t
131 e expression and up-regulates extraembryonic endoderm (ExEn) genes, revealing a conserved function in
133 ctor Gata4, which drives the extra-embryonic endoderm fate, and combined them with ESCs and TS cells
134 nd spontaneous differentiation toward a meso-endoderm fate, owing to de-repression of BMP signalling.
136 , which is expressed in the future posterior endoderm-fated territory; intermediate levels are requir
138 antiviral defenses compromised ectoderm and endoderm formation and dysregulated the development of m
139 valproic acid treatment increased pancreatic endoderm formation, while inhibition of TGFbeta signalin
144 chinery that directs formation of definitive endoderm from pluripotent stem cells is not well underst
147 shows Gata6 enrichment near pluripotency and endoderm genes, suggesting that Gata6 functions as both
150 on, when the epiblast generates mesoderm and endoderm germ layers through epithelial-mesenchymal tran
151 that while the downstream components in the endoderm GRN are common across metazoan phylogeny, initi
152 (2) a subsequent function in activating key endoderm GRN factors and the morphogenetic movements of
155 sa, suggesting that cryptic variation in the endoderm GRN may be tuned by opposing requirements for t
160 are both derived from the posterior foregut endoderm, however, the interdependence of these two cell
161 fied many of the upstream signals specifying endoderm identity in different model systems, revealing
163 dy epithelium emerging from pharyngeal pouch endoderm in early organogenesis, differential Foxa1/Foxa
166 al. (2016) demonstrate an active role of the endoderm in this process, challenging the prior view tha
168 s of these antibodies enable one to optimize endoderm induction and hepatic specification from any hP
169 reveals a de-repression mechanism underlying endoderm induction that may be recapitulated in other de
171 hibians, but we show that at the cell level, endoderm internalisation exhibits characteristics remini
172 propose that apical constriction leading to endoderm invagination is the source of the extrinsic for
174 -lapse imaging showed that hepatic-specified endoderm iPSCs (HE-iPSCs) self-assembled into three-dime
177 During amphibian gastrulation, presumptive endoderm is internalised as part of vegetal rotation, a
179 ling mechanism emanating from the pharyngeal endoderm is required for crucial tissue interactions dur
180 thway, which is active in the dorsal hindgut endoderm, is required for hindgut extension and colon fo
182 osteriorize" 88% of the embryo, inducing gut endoderm-like gene expression and morphogenetic movement
184 oF variants perturbed cardiac genes and also endoderm lineage genes that direct PDX1 expression and p
185 in the epiblast marks the entire definitive endoderm lineage, the anterior mesendoderm, and midline
186 ico precursors of the epiblast and primitive endoderm lineages and revealed a role for MCRS1, TET1, a
187 a consistent ratio of epiblast and primitive endoderm lineages is achieved through incremental alloca
191 inhibited expression of RA-induced Hoxa1 and endoderm master control genes such as Gata4 and Gata6.
192 ingly, the ligand pdgfaa is expressed in the endoderm medial to the pdgfra-expressing myocardial prec
197 iblast self-organizes into the 3 germ layers-endoderm, mesoderm and ectoderm, which eventually form t
199 infer a spatiotemporal signaling network of endoderm-mesoderm interactions that orchestrate foregut
200 m layer, which undergoes a complex series of endoderm-mesoderm-mediated signaling events to generate
202 wnstream of high nbeta-catenin segregate the endoderm/mesoderm boundary, which is further reinforced
203 ivation and/or maintenance of key regulatory endoderm/mesoderm genes and is essential for gastrulatio
204 we highlight how cross-organismal studies of endoderm morphogenesis provide a useful perspective that
206 ALPM during embryogenesis, highlighting why endoderm movement is essential for heart development, an
207 ndent migratory modes: co-migration with the endoderm, movement from the dorsal to the ventral side o
208 thelin 1 (Edn1) expression in the pharyngeal endoderm of the dorsal arch, thus preventing dorsal EDNR
209 manipulation of SHH signaling in either the endoderm or NC mesenchyme had direct and indirect effect
211 does not form, embryos fail to elongate, and endoderm organization, ectodermal cell polarity and patt
214 key stages following gastrulation, including endoderm patterning, organ specification, and organogene
217 ll form the new organism, from the primitive endoderm (PE), which will form the yolk sac, is a crucia
218 uclear markers in the ectoderm, mesoderm and endoderm/pharynx; and a Morphogenesis strain that expres
220 s (hPSCs) requires the induction of a proper endoderm population, broadly characterized by the expres
221 gle-cell transcriptomes, which represent all endoderm populations within the mouse embryo until midge
222 FCs share hallmark properties with primitive endoderm (PrE) and can be regulated by non-canonical Wnt
223 between the epiblast (Epi) and the primitive endoderm (PrE) fate that occurs in the mammalian preimpl
224 nalysis of EPI and extra-embryonic primitive endoderm (PrE) formation during preimplantation developm
225 ey signal driving specification of primitive endoderm (PrE) versus pluripotent epiblast (EPI) within
226 h forms the embryo proper, and the primitive endoderm (PrE), which forms extra-embryonic yolk sac tis
230 ironments codifying hPSCs towards definitive endoderm, precardiac or presomitic mesoderm within the f
233 lly similar to epiblast, ectoderm, mesoderm, endoderm, primordial germ cells, trophectoderm, and amni
235 involve both differentiation of distal lung endoderm progenitors and extensive cellular remodeling o
236 anscriptomes from embryonic day (E)7.5, when endoderm progenitors are specified, to E10.5 liver, when
238 y tissues in chimeric animals while Sox17(+) endoderm progenitors specifically contributed in a regio
239 ptotic gene BCL2 enables EpiSCs and Sox17(+) endoderm progenitors to integrate into blastocysts and c
240 aling in these cells allows specification of endoderm progenitors, while the cells further from the m
241 ues of the notochord, floor plate and dorsal endoderm, raising the question of whether midline tissue
242 , in which genomic variants, or knockdown of endoderm regulatory genes, that result in a high SKN-1 r
243 over that Smad2 inactivation in the visceral endoderm results in increased numbers of PGCs due to an
245 The stomach, an organ derived from foregut endoderm, secretes acid and enzymes and plays a key role
247 Through this approach, we identified two endoderm-specific antibodies, HDE1 and HDE2, which stain
248 anscription through the sonic hedgehog (Shh) endoderm-specific enhancer MACS1 and that GATA-binding s
249 promoter, it can replace the complete set of endoderm-specific GATA factors: END-1, END-3, ELT-7 and
250 Notably, however, brain manganese levels of endoderm-specific knockouts were lower than whole-body k
252 in, and classify sets of stem cell-specific, endoderm-specific, and shared accessibility-modifying tr
253 including at genes involved in mesoderm and endoderm specification and at the Hox and Fox gene famil
255 signaling is initially normal and increasing endoderm specification does not rescue mesendodermal cel
256 g as a major mechanism regulating pancreatic endoderm specification during patterning of the gut tube
257 actor; however, the requirement for SKN-1 in endoderm specification varies widely among distinct C. e
258 e core transcriptional network necessary for endoderm specification while promoting neuroectoderm fac
260 differentiated in 3 dimensions into hepatic endoderm spheroids and stepwise into hepatoblast spheroi
261 ck to the low levels of the fetal prehepatic endoderm stage, leading to necrosis and lethality within
264 phoblast stem cell lines and extra-embryonic endoderm stem cells can be directly derived from expande
266 t from the dorsal to the ventral side of the endoderm (subduction) and migration independent of endod
268 e formation of hepatic progenitor cells from endoderm that has been derived from human induced plurip
269 as alpha-cells, or other cells derived from endoderm); the engineering of non-beta-cells that are ca
271 1-Pax9 genetic interaction is the pharyngeal endoderm, therefore revealing that a Tbx1-Pax9-controlle
272 o specify hepatic fate within the definitive endoderm through activation of the FGF receptors (FGFRs)
273 itive streak to form mesoderm and definitive endoderm, through an epithelial-mesenchymal transition.
274 hat AChE is specifically required in the gut endoderm tissue, a non-neuronal cell population, where i
277 ent and reveals the contribution of visceral endoderm to the endoderm in the early mouse embryo.
278 paraxial mesoderm, lateral plate, ectoderm, endoderm) to drive axis morphogenesis remain largely unk
279 n of human embryonic stem cells (hESCs) from endoderm toward terminally differentiated hepatocytes, t
280 is promoted by DIGIT, occupies enhancers of endoderm transcription factors and is required for endod
281 o show that overexpression of two definitive endoderm transcription factors, T and Foxa2, results in
282 vealed development trajectories of primitive endoderm, trophectoderm, epiblast lineages, and PGCLCs.
283 Notably, cells committed to mesoderm and endoderm undergo widespread coordinated epigenetic rearr
285 grate towards one another, internalizing the endoderm until they meet at the yolk stalk (umbilicus in
289 ntractility and compliance in the underlying endoderm, we find that MET in HPCs can be accelerated in
290 nscription factor Pdx1 within the pancreatic endoderm, where it is required for the specification of
291 enhances Nodal signaling to properly specify endoderm, whereas the 'migration model' posits that Todd
292 fferentiation of cells into anterior foregut endoderm, which is followed by their lineage specificati
294 y spatially converged within the nascent gut endoderm, which revealed these cells to be globally simi
295 n II flows towards the presumptive posterior endoderm, which still undergoes apical constriction in a
296 nical Wnt pathway to specify and pattern the endoderm while repressing alternative mesectoderm fates.
297 progress from pluripotency towards primitive endoderm while retaining their capacity to re-enter self
298 and progressive atrophy of the proximal lung endoderm with complete epithelial loss at later stages o
299 human embryonic stem cell-derived definitive endoderm with the goal of identifying cell surface marke
300 hoblast stem cells (TS), and extra-embryonic endoderm (XEN) stem cells to generate embryo-like struct