ライフサイエンスコーパス: eudicot

1 pported clade of monocots + (Ceratophyllum + eudicots).

2 ar evolutionary pattern between monocots and eudicots.

3 pha-response'), behaving in this regard like eudicots.

4 r graminoids and more shrubs and forbs, i.e. eudicots.

5 ants (a moss and a lycophyte), monocots, and eudicots.

6 revealed that magnoliids were sister to the eudicots.

7 division and floral patterning in model core eudicots.

8 and are thus likely to be widespread in the Eudicots.

9 ion has acted on Rubisco in a similar way in eudicots.

10 with the largest flowering plant clade, the eudicots.

11 s a highly dynamic and widespread feature of eudicots.

12 this interaction is scarce outside the core eudicots.

13 sentative of the sister lineage to all other eudicots.

14 t the gamma appears to be restricted to core eudicots.

15 tity has evolved within this lineage of core eudicots.

16 ave been only found in early angiosperms and eudicots.

17 me sequences of non-grass monocots and basal eudicots.

18 lopmental characteristics of this lineage of eudicots.

19 ed for establishing symmetry in diverse core eudicots.

20 flowering time genetic pathways across core eudicots.

21 ollen grains as a lower bound for the age of eudicots.

22 ent expansions of the family in monocots and eudicots.

23 e the gamma triplication event shared by all eudicots.

24 d genes related to floral diversity in basal eudicots.

25 cation coincident with radiation of the core eudicots.

26 ons leading to these copies predate the core eudicots.

27 including mosses, gymnosperms, monocots and eudicots.

28 0 genes in a common ancestor to monocots and eudicots.

29 of a role in petal specification in the core eudicots.

30 eohexaploidy, may have only happened in core eudicots.

31 ntirrhinum, both of which are highly derived eudicots.

32 asterids, two major phylogenetic lineages of eudicots.

33 the study of sex determination in the basal eudicots.

34 egments back to the ancestor of monocots and eudicots.

35 e function is conserved between monocots and eudicots.

36 eiled novel functions for a SUP-like gene in eudicots.

37 ivity is conserved among monocots as well as eudicots.

38 ed to stomatal function in both monocots and eudicots.

39 unctionally conserved between bryophytes and eudicots.

40 e patterning of veins and dispersed stoma in eudicots.

41 -mediated petal development outside the core eudicots.

42 rating conservation of DUO1 regulation among eudicots.

43 and contributions to the diversification of eudicots.

44 hat often function redundantly in other core eudicots.

45 is distinctly different between grasses and eudicots.

46 cumulation in storage tissues of grasses and eudicots.

47 codon usage in 12 plant species, including 6 eudicots, 5 monocots and the green alga Chlamydomonas re

48 leward spread of monosulcates and tricolpate eudicots, accelerating in the Albian.

49 servation patterns of miRNAs in monocots and eudicots after whole-genome duplication (WGD), (2) an an

50 We show that, similar to many eudicots, all the maize B class proteins bind DNA as obl

51 a full C-class mutant in a noncore ("basal") eudicot, an ornamental double flower, affecting both org

52 ation and its genetic causes within the core eudicots--an endeavor that will have broader implication

53 Although most eudicot and gymnosperm species generate lignins solely v

54 elation to its taxonomic position as a basal eudicot and its determinate growth habit.

55 e plant species of five representative plant eudicot and monocot families that span the angiosperm ph

56 g of the developmental mechanisms generating eudicot and monocot leaves.

57 ower initiation and development among higher eudicot and monocot model plants and provide new opportu

58 ylogenetically intermediate between the core eudicot and monocot models, Arabidopsis and Oryza.

59 Studies in both eudicot and monocot species have defined a central role

60 tigate the regulation of biosynthesis across eudicot and monocot species under heat stress.

61 s that were present before the divergence of eudicot and monocot species, but the scales and timefram

62 ll interfering RNAs (ta-siRNAs) conserved in eudicot and monocot species.

63 Through the identification of eudicot and monocot specific clades, these analyses cont

64 nct from petals, thus their true homology to eudicot and nongrass monocot floral organs has been a to

65 ighly supported relationships: sisterhood of eudicots and a clade containing Chloranthaceae and Cerat

66 st clusters contain sequences from monocots, eudicots and Amborella trichopoda, with sequences from P

67 s suggests that ERF12 is conserved among all eudicots and appeared in angiosperm evolution concomitan

68 ld have coincided with the evolution of core eudicots and contributed to the evolution of nectar secr

69 ve root growth promoter in both monocots and eudicots and could be a valuable tool to enhance crop vi

70 t EIN4 and ETR2 homologs appear only in core eudicots and ERS2 homologs appear only in the Brassicace

71 n analyses with phylogenetic footprinting in eudicots and in Arabidopsis accessions, we identify a ci

72 hemicellulose in the secondary cell walls of eudicots and in the primary and secondary cell walls of

73 than half those previously reported for core eudicots and members of Poaceae.

74 d at least twice and after the separation of eudicots and monocot cereals.

75 tion to phytochrome gene regulation in model eudicots and monocots and in light of current genome seq

76 e phylogenetic position of which relative to eudicots and monocots has not been conclusively resolved

77 ic diversity in flowering plants outside the eudicots and monocots, and it is often unclear how to in

78 analysis revealed CPT gene families in both eudicots and monocots, and showed that all the short-cha

79 ng support for a sister relationship between eudicots and monocots, and this group is sister to a cla

80 codons appears to be well conserved between eudicots and monocots, and to a lesser degree between th

81 mechanisms of leaf development are shared in eudicots and monocots, variations in the timing, degree

82 the unique pattern of TS and CYP assembly in eudicots and monocots.

83 cold, is important for seasonal flowering in eudicots and monocots.

84 are occurrence of bilateral perianth outside eudicots and monocots.

85 fication' of CR pre-dates the bifurcation of eudicots and monocots.

86 context of Type I and Type II cell walls in eudicots and monocots.

87 broader than those of their counterparts in eudicots and monocots.

88 ications occurred within these clades in the eudicots and monocots.

89 troversial phylogenetic position relative to eudicots and monocots.

90 different mechanisms of pathway assembly in eudicots and monocots; in the former, microsyntenic bloc

91 us cell wall features that are distinct from eudicots and other plants.

92 lar targets that are, perhaps, common to all eudicots and that endogenous signaling components can be

93 chome-repressing role late in the history of eudicots and that the ancestral Antirrhinum had an activ

94 ference for inferring the early evolution of eudicots and the mechanisms underlying vessel element fo

95 nce the last common ancestor of monocots and eudicots and the method should be broadly applicable to

96 s of their respective gene families in basal eudicots and their conservation suggests they are import

97 basal angiosperms, magnoliids, monocots, and eudicots) and growth habits (tree, shrub, herbaceous, an

98 older gamma event, which is shared with most Eudicots, and a more recent Solanaceae event that is sha

99 maize that is conserved across monocots and eudicots, and highlight previously undescribed factors i

100 y angiosperm plants, including basal dicots, eudicots, and monocots, emit (E,E)-4,8,12-trimethyltride

101 ation correlates with the origin of the core eudicots, and produced the euAP1 and euFUL clades.

102 axial/adaxial cell fate in lateral organs of eudicots, and repressing meristematic genes in different

103 he genetic basis of diverse nectary forms in eudicot angiosperm species using CRABS CLAW (CRC), a gen

104 as three GGH genes that, like those in other eudicots, apparently diverged recently.

105 The basal eudicot Aquilegia (columbine) has an unusual floral stru

106 The petal spur of the basal eudicot Aquilegia is a key innovation associated with th

107 er of each of two main angiosperm groups-the eudicots (Arabidoposis thaliana) and the monocots (Oryza

108 cell walls of onion (Allium cepa), the model eudicot Arabidopsis (Arabidopsis thaliana), and moss (Ph

109 conservation of MYC-related TFs between the eudicot Arabidopsis and the liverwort Marchantia polymor

110 ls from the monocot Zea mays (maize) and the eudicot Arabidopsis thaliana (Arabidopsis) have highly u

111 Curiously, the eudicot Arabidopsis thaliana is not affected when either

112 onsiderably more organ specific in the model eudicot Arabidopsis thaliana.

113 known positions for counterpart genes in the eudicot Arabidopsis.

114 e level, gene regulation of this family in a eudicot, Arabidopsis, and a monocot, maize, is also char

115 NOL TRANSFERASE gene was introduced into two eudicots, Arabidopsis (Arabidopsis thaliana) and poplar

116 ses verify that the Trochodendrales and core eudicots are sister lineages and showed that two whole-g

117 giosperm genomes suggest that Magnoliids and eudicots are sister to monocots.

118 erize Arabidopsis flowers (and perhaps other eudicots) are derived, and correlate with a shift toward

119 rs generally applicable to distantly related eudicots as well as monocot plants.

120 h the Brassicaceae family evolved from other eudicots at the beginning of the Cenozoic era of the Ear

121 In monocots and eudicots, B class function specifies second and third wh

122 The degree to which the eudicot-based ABC model of flower organ identity applies

123 not only phylogenetically related to FLC in eudicots but also functions as a flowering repressor in

124 lobate leaves, many identified previously as eudicots but in some cases pre-dating the appearance of

125 n ancient genome triplication shared by core eudicots but no further whole-genome duplication in the

126 inding allows the NLP to become cytolytic in eudicots but not monocots.

127 oxins that facilitate microbial infection of eudicot, but not of monocot plants.

128 ng the early diverging angiosperms and basal eudicots, but 62 independent gene and intron losses are

129 e genes have undergone positive selection in eudicots, but not in grasses.

130 thesis are largely overlapping with those of eudicots, but salient differences among species have bee

131 f seirena-1 (sei-1), a mutant from the basal eudicot California poppy (Eschscholzia californica) that

132 Most eudicots carry a pseudoenzyme PDX1.2 that is a noncataly

133 (alpha-expansin) family were found to loosen eudicot cell walls but to be less effective on grass cel

134 n cells had strongly undulating margins, and eudicot cells showed no particular undulation degree.

135 entity program in the Caryophyllales, a core eudicot clade in which perianth differentiation into sep

136 CNS sequences can be detected throughout the eudicot clade of flowering plants, but also that a subse

137 sociated with reproductive structures in the eudicot clade of flowering plants.

138 25+ large inversions now known in this small eudicot clade.

139 x gene homologs is invariant across the core eudicot clade.

140 onocot lineage after its divergence from the eudicot clade.

141 places magnoliids as sister to the monocots-eudicots clade and indicates that black pepper has diver

142 lection constraints have acted on three core eudicot clades, which might enable paleoduplicated PDAT

143 are limited to the more derived monocot and eudicot clades.

144 Independent losses of CMT1, 2, and 3 in eudicots, CMT2 and ZMET in monocots and monocots/commeli

145 Although the eudicots comprise 75% of all angiosperms, most of the di

146 regulator of nectary development within the eudicots, concomitant with the association of nectaries

147 hat the last common ancestor of monocots and eudicots contained a minimum of 17 expansins.

148 nd fenugreek (Trigonella foenum-graecum), an eudicot culinary herb plant commonly used as a galactago

149 de that a cis-regulatory module conserved in eudicots directs the spatial and temporal expression of

150 d ARF lineages originated before the monocot-eudicot divergence.

151 anding how functional divergence of the core eudicot duplicates occurred requires a careful examinati

152 To investigate the impact of the core eudicot duplication on the functional diversification of

153 alyze the results in the context of the core eudicot duplication, and discuss the implications of our

154 ylan binds hydrophilic faces of cellulose in eudicots, early-branching angiosperm, and gymnosperm cel

155 independent genome duplications in the basal eudicot Eschscholzia californica (California poppy: Papa

156 unctions are largely conserved in other core eudicot euAP1 and euFUL genes, but notably, the role of

157 all roles previously described for the core eudicot euAP1 and euFUL genes, we postulate subfunctiona

158 nalyses show two gene clades within the core eudicots, euAP1 (including Arabidopsis APETALA1 and Anti

159 he T. sinense genome will help us understand eudicot evolution, the genetic basis of tracheary elemen

160 the gamma polyploidy event occurred early in eudicot evolution.

161 Although Pentapetalae (comprising all core eudicots except Gunnerales) include approximately 70% of

162 cies that are wind-pollinated, whereas basal eudicot families and basal monocot families more commonl

163 rized only in vitro come from four different eudicot families and constitute a separate branch of the

164 While most eudicot families including the Brassicaceae possess a si

165 activity of genes in this branch in diverse eudicot families suggest that GLS activity encoded by th

166 wever, clear differences between monocot and eudicot family members exist, and these are analyzed in

167 vering a broad taxonomic range, including 13 eudicots, five monocots, one lycopod, one moss, and five

168 In contrast to most eudicots, floral organs are weakly differentiated in Nup

169 Food body rewards are exceedingly rare among eudicot flowering plants and are only known to occur on

170 It is surprising that members from eudicots form one group, whereas those from cereals form

171 leotide position of codons is AU-rich in the eudicot genomes (35-42% of G+C content), but GC-rich in

172 e evolution of sympetaly in the asterid core eudicot genus Petunia (Solanaceae), we carried out globa

173 ly homologous regions of monocots (rice) and eudicots (grapevine).

174 ation, and that derived nectary positions in eudicots have altered regulation of CRC.

175 Most eudicots have three equatorial apertures but several tax

176 thin the megadiverse Asteridae clade of core eudicots, have occurred through the modification of a co

177 h like what has been observed for their core eudicot homologs.

178 nly to its native monocot host but also to a eudicot host, which suggests that the underlying mechani

179 y is the first to identify miRNAs in a lower eudicot in which comprehensive genomic resources are bec

180 lade compared with its position as sister to eudicots in many cladistic analyses.

181 analyses in 83 species dispersed throughout eudicots including species with and without equatorial a

182 ntaining foreign organellar DNA from diverse eudicots, including many transfers from parasitic plants

183 seed plants, including new sequences from 25 eudicots, indicate that soon after its origin, Pentapeta

184 the divergence of the Ranunculales and core eudicots, indicating that the gamma appears to be restri

185 divergent AP3 C-terminal domain in the core eudicots is correlated with the acquisition of a role in

186 ationship of Hyrcantha ("Sinocarpus") to the eudicots is discussed.

187 pollen morphogenesis (microsporogenesis) in eudicots is due to developmental constraints or to selec

188 m cacao and tea, suggesting that caffeine in eudicots is of polyphyletic origin.

189 ssor (FLC, MADS-box transcription factor) in eudicots, it induces an activator (TaVRN1, an AP1 clade

190 lutionary scenario of the modern monocot and eudicot karyotypes from their diploid ancestors, offers

191 les, one of four early diverging lineages of eudicots known for having vesselless secondary wood.

192 MARY: Comparisons of concepts in monocot and eudicot leaf development are presented, with attention t

193 Monocot and eudicot leaf initiation: differences in degree and timin

194 Leaf zones in monocot and eudicot leaves 707 III.

195 Monocot and eudicot leaves are distinguished by the differential ela

196 stinct mechanisms may operate in monocot and eudicot leaves to coordinate stomatal patterning with th

197 We propose that monocot and eudicot leaves undergo expansion of mediolateral domains

198 l predictions, and to phenotypes observed in eudicot leaves, the increase in stomatal density did not

199 s, one monocot lineage (Alismatales) and one eudicot lineage (Lentibulariaceae).

200 ylogeny, sequential separation of major core eudicot lineages and temporal mode of diversifications,

201 vocado as sister to the enormous monocot and eudicot lineages combined.

202 peptides appear to have evolved only in some eudicot lineages of this family, like the one leading to

203 ereas the evolutionarily derived monocot and eudicot lineages share a far more uniform floral ground

204 The rapid radiation of core eudicot lineages that gave rise to nearly 75% of angiosp

205 ented for ancestral grass (Poaceae) and core eudicot lineages.

206 sangiosperms (Ceratophyllum, Chloranthaceae, eudicots, magnoliids, and monocots).

207 Previous studies of the lower eudicot model Aquilegia have revealed differential expre

208 ental genetics comes primarily from the core eudicot model Arabidopsis thaliana.

209 ar genetic control in distantly related core eudicot model organisms.

210 The eudicot model plant Arabidopsis (Arabidopsis thaliana) s

211 development, established through studies in eudicot model species, proposes that petal and stamen id

212 igation of homeotic mutants outside the core eudicot model species.

213 S-box genes in basal angiosperms relative to eudicot model systems, we isolated several floral MADS-b

214 Analysis of the sequenced non-rosid eudicots monkey flower and columbine, the monocots maize

215 Whereas the flexible circuitry spans the eudicot-monocot divide, the frequency of specific cis mo

216 on ancestral chromosome dating to before the eudicot/monocot split.

217 enes from diverse vascular plants, including eudicots, monocots, and a lycophyte.

218 nomes, representing each of the five groups: eudicots, monocots, magnoliids, Chloranthaceae and Cerat

219 Unlike eudicots, most monocot leaves display parallel venation

220 s, multiseeded ovaries, and, in monocots and eudicots, much faster pollen tube growth rates.

221 rose (Suc) across cellular membranes, and in eudicots, multiple SUTs are known to function in Suc phl

222 Unlike the vast majority of other eudicots, nearly all asterids have a single integument,

223 anatomical differences between monocots and eudicots or between herbaceous and woody plants.

224 Promotion of high-protein, palatable eudicots or increasing the protein concentrations of gra

225 otide composition is highly conserved within eudicots or monocots, there is a significant difference

226 randis genome is the first reference for the eudicot order Myrtales and is placed here sister to the

227 families in Aquilegia, a member of the lower eudicot order Ranunculales and an emerging model for the

228 ptomes and 88 other datasets covering 70% of eudicot orders.

229 proteins that shares conserved functions in eudicot organ development and suggests that NOOT and COC

230 olecular clock analysis estimated that crown eudicots originated c. 146 Ma, considerably earlier than

231 the same as that proposed previously for the eudicot paleohexaploidy; however, the more recent nature

232 erization of a FIL orthologue from the basal eudicot, Papaver somniferum (the opium poppy), and demon

233 he functional diversification among the core eudicot PDAT paralogs.

234 Through some unknown mechanism, in most eudicots pericycle cells positioned against the protoxyl

235 of perianth evolution, the concept of a core eudicot petal identity program has not been tested.

236 expression patterns consistent with the core eudicot petal identity program.

237 The eudicot phylogenetic relationships, especially among tho

238 Here, we present a highly supported eudicot phylogeny and diversification rate shifts using

239 A highly supported eudicot phylogeny divided Pentapetalae into two groups:

240 ated transcriptomes revealed a well-resolved eudicot phylogeny, sequential separation of major core e

241 me in two forms, those that are cytotoxic to eudicot plants and those that are noncytotoxic.

242 RN2-like genes have been identified in other eudicot plants, but their function has never been report

243 Nine eudicot plants, representing six different plant familie

244 abundant component of primary cell walls in eudicot plants.

245 /24-nt phasiRNA pathway is widely present in eudicots plants, however, it is absent in legumes and in

246 fter evolutionary divergence of monocots and eudicots, PR5 genes increased asymmetrically among the 1

247 can constitutes most of the hemicellulose in eudicot primary cell walls and functions in cell wall st

248 asterids and after the split of monocots and eudicots, providing strong evidence that the gamma polyp

249 ssland had a greater proportion of N2-fixing eudicots, regularly comprising >60% of their protein int

250 ns pre-dating the divergence of monocots and eudicots remains equivocal in analyses of conserved gene

251 cation coincides with the origin of the core eudicots, resulting in the euFUL and the euAP1 clades.

252 This response is common in eudicot seedlings grown in the dark and is characterized

253 In eudicot seeds the endosperm surrounding the radicle conf

254 ineages (i.e., gymnosperms, commelinids, and eudicots) shape resource use patterns in these herbivore

255 s, we propose that diverse nectaries in core eudicots share conserved CRC gene regulation, and that d

256 ch appears to have been mainly caused by the eudicot-shared ancient gene duplication and subsequent s

257 ically different nectaries from several core eudicot species and is required for nectary development

258 In the distantly related core eudicot species Antirrhinum majus L., paralogous SBP-box

259 e identified its ortholog AqJAG in the lower eudicot species Aquilegia coerulea.

260 d eudicots using six grass species and seven eudicot species as materials.

261 different developmental stages of the basal eudicot species Eschscholzia californica (California pop

262 Studies of flower development in core eudicot species have established a central role for B cl

263 Non-core eudicot species have only sequences similar to euFUL gen

264 bers of the YUC family in moss, monocot, and eudicot species shows that there have been independent e

265 RV-VIGS for probing gene function in a basal eudicot species that is phylogenetically distant from mo

266 ontrol of internode-specific elongation in a eudicot species with a sympodial growth habit and substa

267 which have phloem-loading functions in other eudicot species, did not rescue the Atsuc2-4 mutation, w

268 By surveying 75 eudicot species, here we report that leaf growth polarit

269 However, in a basal eudicot species, no evidence of CRC expression in nectar

270 miR537, which have not yet been reported in eudicot species, were detected in California poppy; loci

271 ecular control of floral development between eudicot species.

272 petal and stamen identities in several core eudicot species.

273 ucture between grass species and a reference eudicot species.

274 nectary-specific sugar transporter in three eudicot species: Arabidopsis thaliana, Brassica rapa (ex

275 ha, Bryopsida, Pinaceae, monocotyledons, and eudicots), species of fungi, Glaucophytes, Chlamydomonas

276 whereas the last emerged before the monocot-eudicot split.

277 ugh the response kinetics varied between the eudicots studied, all had prolonged growth inhibition fo

278 er, the presence of euAP1 genes only in core eudicots suggests that there may have been changes in me

279 pment and evolution, particularly in noncore eudicot taxa.

280 higher frequencies of recent duplication in eudicots than in grasses and their patterns of evolution

281 The Asparagales were more similar to eudicots than to the Poales for these genomic characteri

282 n vitamin B6 homeostasis in times of need in eudicots that carry this gene.

283 ails of their evolution and suggests that in eudicots the CYP716s evolved specifically towards triter

284 the model plant Arabidopsis thaliana, a core eudicot, the floral homeotic C-class gene AGAMOUS (AG) h

285 polyploidy event, gamma, occurred within the eudicots, the phylogenetic placement of the event remain

286 ionships among the Magnoliids, monocots, and eudicots; the molecular basis underlying floral scent bi

287 tions in the melon lineage since the ancient eudicot triplication, and our data suggest that transpos

288 The maize family is expanded relative to eudicots (typically six to eight genes) and rice (Oryza

289 metabolism and transport between grasses and eudicots using six grass species and seven eudicot speci

290 ne values between major high plant lineages (eudicots versus monocots) differed significantly under t

291 expansin clade previously discovered only in eudicots was identified in Spirodela, allowing us to con

292 ary positions and CRC expression analyses in eudicots, we propose that diverse nectaries in core eudi

293 glucuronosyl (MeGlcA) xylan substitutions in eudicots, we recently proposed that an unsubstituted fac

294 sfers are from other angiosperms (especially eudicots), whereas others are from nonangiosperms, inclu

295 However, the core eudicots, which comprise >70% of angiosperm species, exh

296 abiotic stress tolerance strategy in several eudicots, which has not been evolutionarily adapted (or

297 We further demonstrated that there is a eudicot-wide PDAT gene expansion, which appears to have

298 koi, an obligate CAM species within the core eudicots with a relatively small genome ( 260 Mb).

299 functions are conserved between monocots and eudicots, with B-class genes controlling stamen and lodi

300 more akin to early-branching angiosperms and eudicot xylan, lacking arabinose but possessing acetylat