ライフサイエンスコーパス: expectation-maximization

1 mation technique termed variational Bayesian expectation maximization.

2 ce for Q.Clear, compared with ordered-subset expectation maximization.

3 eristic and power over interval mapping with expectation maximization.

4 ing time-of-flight list-mode ordered-subsets expectation maximization.

5 f Bayesian inference, effectively performing expectation maximization.

6 onstructed using pixel-based ordered-subsets expectation maximization.

7 tral amino acid composition that is based on expectation-maximization.

8 d with either 2D or fully 3D ordered-subsets expectation maximization (2 iterations and 8 subsets; 2D

9 version 1.5-the 3-dimensional ordered-subset expectation maximization (3DOSEM) and the 3-dimensional

10 We use an alternating expectation-maximization (AEM) algorithm, alternating be

11 We report an Expectation Maximization algorithm adapting the mixture

12 were reconstructed using an ordered-subsets expectation maximization algorithm and were corrected fo

13 econstructed by using the maximum likelihood-expectation maximization algorithm and were corrected fo

14 We derive an expectation maximization algorithm for maximum-likelihoo

15 onstruction, an iterative maximum likelihood-expectation maximization algorithm is used that models t

16 An expectation maximization algorithm is used to infer the

17 nomeric and dimeric TF-binding motifs and an expectation maximization algorithm MODER2 for learning s

18 To this end, we present STIE, an Expectation Maximization algorithm that aligns the spati

19 he Epigenetic Pacemaker (EPM), a conditional expectation maximization algorithm that estimates epigen

20 rved variants to increase sensitivity and an expectation maximization algorithm that iteratively reca

21 The parameters are determined using an expectation maximization algorithm to both address missi

22 Splat uses the expectation maximization algorithm to calculate maximum-

23 method that uses Hidden Markov Models and an Expectation Maximization algorithm to detect such module

24 n with robust variance and a bootstrap-based expectation maximization algorithm to handle extensive m

25 We created an expectation maximization algorithm to identify cis-regul

26 We provide a tool, L1EM that uses the expectation maximization algorithm to quantify LINE-1 RN

27 Our approach uses the Expectation Maximization algorithm to train a site-of-me

28 It is an expectation maximization algorithm using covariance mode

29 rformed: an ordinary Poisson ordered-subsets expectation maximization algorithm with point-spread fun

30 f those grammars from training data (via the Expectation Maximization algorithm).

31 try using a Monte Carlo-based ordered-subset expectation maximization algorithm).

32 Employing the expectation maximization algorithm, the analysis learns

33 n and model selection and can be fit with an expectation maximization algorithm, we call Cox-assisted

34 porated into a PET list-mode ordered-subsets expectation maximization algorithm.

35 plotype frequencies were estimated using the expectation maximization algorithm.

36 were reconstructed using the ordered-subsets expectation maximization algorithm.

37 thm was an ordered-subset maximum-likelihood expectation maximization algorithm.

38 esian framework employing an instance of the expectation maximization algorithm.

39 trained alternately by adopting variational expectation maximization algorithm.

40 orithm beyond the standard Variational Bayes Expectation Maximization algorithm.

41 and reconstructed with a maximum-likelihood expectation maximization algorithm; the system model inc

42 the image by a penalized maximum-likelihood expectation-maximization algorithm (PG-PEM).

43 The implementation of the expectation-maximization algorithm allows for the effici

44 roblem is set in a likelihood framework, the expectation-maximization algorithm allows the incomplete

45 We describe an expectation-maximization algorithm and a modified versio

46 An expectation-maximization algorithm and another two stoch

47 plotype frequencies were generated using the expectation-maximization algorithm and compared between

48 imating the frequency of haplotypes with the expectation-maximization algorithm and comparing haploty

49 mple, iterative procedure that relies on the expectation-maximization algorithm and that uses standar

50 ds by first estimating abundances through an expectation-maximization algorithm and then utilizing ab

51 plotype frequencies were generated using the expectation-maximization algorithm and were compared bet

52 three groups using k-means clustering or the expectation-maximization algorithm applied to a Gaussian

53 arental genotype are accommodated through an expectation-maximization algorithm approach.

54 Empirical Bayesian prior and expectation-maximization algorithm are used for paramete

55 ion of methods of moments procedures and the expectation-maximization algorithm are used to estimate

56 Underlying DR-SC is an efficient expectation-maximization algorithm based on an iterative

57 using the Associate program to implement the expectation-maximization algorithm based on the gene-cou

58 It uses variational inference and a scalable expectation-maximization algorithm for efficient imputat

59 pirical parameters, Bisulfighter can use the expectation-maximization algorithm for HMMs to adjust pa

60 model for stochastic networks and develop an expectation-maximization algorithm for identifying stoch

61 Unlike MEME, which uses the expectation-maximization algorithm for motif discovery,

62 different weights across reads, and uses an expectation-maximization algorithm for parameter estimat

63 transcription factors and have developed an Expectation-Maximization algorithm for statistical infer

64 current state-of-the-art methods such as the expectation-maximization algorithm for the same task wou

65 coefficients via likelihood methods and the expectation-maximization algorithm is computationally ve

66 Analysis of these data with an expectation-maximization algorithm revealed 22 haplotype

67 e present a finite mixture framework with an expectation-maximization algorithm that considers two mo

68 We derive an online Expectation-Maximization algorithm that explains human p

69 Reconstruction was by an expectation-maximization algorithm that included scatter

70 which we call SeqEM, applies the well-known Expectation-Maximization algorithm to an appropriate lik

71 CLAM uses an expectation-maximization algorithm to assign multi-mappe

72 ranscript compatibility scores, and a guided expectation-maximization algorithm to assign reads to tr

73 for motif discovery, EXTREME uses the online expectation-maximization algorithm to discover motifs.

74 l to represent the consensus map and use the expectation-Maximization algorithm to drive the refineme

75 VGA uses an expectation-maximization algorithm to estimate abundance

76 by cases with missing subtype, by using the expectation-maximization algorithm to estimate risk para

77 We used an expectation-maximization algorithm to estimate the param

78 marker interval, we describe how to use the expectation-maximization algorithm to examine the probab

79 st one crossover, we describe how to use the expectation-maximization algorithm to examine the probab

80 We show how to use the expectation-maximization algorithm to find the posterior

81 ere we present Emu, an approach that uses an expectation-maximization algorithm to generate taxonomic

82 ation, inverse probability weighting, or the expectation-maximization algorithm to impute missing dat

83 , we use an iterative process similar to the expectation-maximization algorithm to infer missing SNPs

84 maximum-likelihood approach together with an expectation-maximization algorithm to jointly estimate a

85 apply Bayesian inference with the stochastic Expectation-Maximization algorithm to quantify underlyin

86 The expectation-maximization algorithm was used to derive es

87 a 1000 bootstrap replicate analysis with an expectation-maximization algorithm was used to identify

88 ood conditional on the random effect, and an Expectation-Maximization algorithm where we further cond

89 nd predicted ratings can be inferred with an expectation-maximization algorithm whose running time sc

90 and subsequently estimate FDR using a novel expectation-maximization algorithm with constraints.

91 ion, we estimated fusion abundance using the Expectation-Maximization algorithm with sparse optimizat

92 e mixture model could be estimated using the expectation-maximization algorithm with the observed dis

93 rs, and neural responses, and then derive an expectation-maximization algorithm with variational infe

94 We propose cnvCSEM (CNV-guided ChIP-Seq by expectation-maximization algorithm), a flexible framewor

95 We use the expectation-maximization algorithm, a classic statistica

96 rence methods such as Clark's algorithm, the expectation-maximization algorithm, and a coalescence-ba

97 Haplotypes were inferred with an expectation-maximization algorithm, and allelic interact

98 stimated haplotypes were generated using the expectation-maximization algorithm, and frequencies of t

99 Therefore, we have developed an optimized expectation-maximization algorithm, designated HPV-EM, t

100 ies compared to the standard HMM based on an expectation-maximization algorithm, leading to more accu

101 e likelihood and maximize it via variational expectation-maximization algorithm, opening a new line o

102 can all be optimized automatically using the expectation-maximization algorithm, taking the number of

103 Using an expectation-maximization algorithm, we fit this beta-HMM

104 ian mixture models, l1 minimization, and the expectation-maximization algorithm, we prove that spectr

105 nery of probabilistic mixture models and the expectation-maximization algorithm, we show that it is p

106 he baseline line-of-response ordered-subsets expectation-maximization algorithm, with the baseline al

107 hen the haplotype phase is unobserved is the expectation-maximization algorithm, with the likelihood

108 sertion sites and is maximized with a hybrid expectation-maximization algorithm.

109 y genotyped triads can contribute through an expectation-maximization algorithm.

110 hood-based inference is obtained through the Expectation-Maximization algorithm.

111 y using Poisson regression together with the expectation-maximization algorithm.

112 Haplotypes were estimated with the expectation-maximization algorithm.

113 mum likelihood context, implemented with the expectation-maximization algorithm.

114 degree of differential expression using the Expectation-Maximization algorithm.

115 librium and haplotypes were generated by the expectation-maximization algorithm.

116 ved peptide assignments is derived using the expectation-maximization algorithm.

117 The ML solutions are obtained via the expectation-maximization algorithm.

118 otype frequency estimates obtained using the expectation-maximization algorithm.

119 ISH-adorned meiotic configurations using the expectation-maximization algorithm.

120 e history are subsequently inferred using an Expectation-Maximization algorithm.

121 parameters iteratively optimized through an Expectation-Maximization algorithm.

122 rated to the clonal data using a tailor-made expectation-maximization algorithm.

123 l available data in an implementation of the expectation-maximization algorithm.

124 haplotypes inferred from genotypes using an expectation-maximization algorithm; and (3). as unphased

125 ses relative to the wait-list control group (expectation-maximization algorithm; etap2 = 0.019, P = .

126 Expectation maximization algorithms were used to perform

127 rithm and another two stochastic versions of expectation-maximization algorithms are described.

128 structed using 2-dimensional ordered-subsets expectation maximization and 3-dimensional maximum a pos

129 re reconstructed using 3D maximum-likelihood expectation maximization and analyzed with software.

130 Unlike local search techniques such as expectation maximization and Gibbs samplers that may not

131 were reconstructed using both ordered-subset expectation maximization and Q.Clear (block-sequential r

132 , and haplotype frequencies were obtained by expectation-maximization and maximum-likelihood estimati

133 pplied a modified SSD method, as well as the expectation-maximization and partition-ligation algorith

134 Fitting is accomplished through an expectation-maximization approach designed to learn the

135 ng for multiple-instance learning (MMIL), an expectation-maximization approach that trains cell-level

136 nstead of relying on imputed data, we use an expectation-maximization approach to estimate marginal d

137 edge-type transition matrix is trained by an Expectation-Maximization approach, and a stochastic grad

138 We additionally describe an expectation maximization based iterative algorithmic app

139 Finally, we propose an Expectation-Maximization based deconvolution approach fo

140 onte Carlo -based posterior inference and an expectation maximization-based algorithm for posterior a

141 m for Boolean matrix factorization (BMF) via expectation maximization (BEM).

142 te transition probabilities for an HMM using expectation maximization, but modified here to estimate

143 a top-down approach, utilizing the powerful expectation maximization classification algorithm to exa

144 based on the Voronoi tessellation and using expectation-maximization clustering and Random Forest cl

145 eriments, called Debris Identification using Expectation Maximization (DIEM).

146 ied detection of RNA folding ensembles using expectation-maximization (DREEM) clustering to unravel t

147 me 'detection of RNA folding ensembles using expectation-maximization' (DREEM), which reveals the alt

148 parameter estimation is achieved through the expectation-maximization (E-M) algorithm.

149 serving that it is essentially a form of the expectation maximization (EM) algorithm applied to the c

150 ed on haplotype data with a variation of the expectation maximization (EM) algorithm for haplotype in

151 The accuracy of the expectation maximization (EM) algorithm in the presence

152 es an effective bias removal with a weighted expectation maximization (EM) algorithm to distribute re

153 Bayesian statistical model and a variational expectation maximization (EM) algorithm to estimate non-

154 To test the hypothesis, we used an iterative expectation maximization (EM) algorithm to quantify tran

155 The expectation maximization (EM) algorithm used to fit the

156 Haplotypes were inferred using an expectation maximization (EM) algorithm, and the data we

157 The Expectation Maximization (EM) algorithm, in the form of

158 of these parameters were obtained using the expectation maximization (EM) algorithm.

159 We distribute Baum-Welch Expectation Maximization (EM) algorithms running on our

160 able optimization problem and rely either on expectation maximization (EM) or on local heuristic sear

161 A variational Bayesian Expectation Maximization (EM) with smoothed probabilitie

162 ompare the Fisher scoring algorithm with the expectation maximization (EM)-based ML method, we also d

163 We implement an expectation maximization (EM)-like method to estimate mu

164 de maximum likelihood estimation (MLE) using expectation maximization (EM); the set cover approach ma

165 es and heritabilities using a combination of expectation-maximization (EM) algorithm and average info

166 n potential energy function by employing the expectation-maximization (EM) algorithm and performs dif

167 ate liabilities as missing values so that an expectation-maximization (EM) algorithm can be applied h

168 In the third step, the expectation-maximization (EM) algorithm combined with th

169 ed region using an empirical approach and an expectation-maximization (EM) algorithm developed for es

170 l clustering and Gaussian mixture model with expectation-maximization (EM) algorithm for detecting co

171 The expectation-maximization (EM) algorithm for generating m

172 Furthermore, we describe an expectation-maximization (EM) algorithm for haplotype ph

173 such statistical methods typically apply the expectation-maximization (EM) algorithm for inference.

174 oform reconstruction problem, and provide an expectation-maximization (EM) algorithm for its maximum

175 A maximum likelihood method using the expectation-maximization (EM) algorithm for optimization

176 The Expectation-Maximization (EM) algorithm has been success

177 eater accuracy than the implementation of an Expectation-Maximization (EM) algorithm incorporated in

178 ave been developed for motif-finding use the expectation-maximization (EM) algorithm iteratively.

179 tomation using the original semi-constrained expectation-maximization (EM) algorithm that allows infe

180 We derive an expectation-maximization (EM) algorithm that appears to

181 e present in this paper a privacy-preserving Expectation-Maximization (EM) algorithm to build GLMM co

182 The model is implemented with the expectation-maximization (EM) algorithm to dissect unobs

183 We invented an Expectation-Maximization (EM) algorithm to divide patien

184 and Waterman proposed one such model and an expectation-maximization (EM) algorithm to estimate sequ

185 We developed an expectation-maximization (EM) algorithm to estimate the

186 We use the Expectation-Maximization (EM) algorithm to estimate the

187 We develop a fast expectation-maximization (EM) algorithm to fit models by

188 and many other popular motif finders use the expectation-maximization (EM) algorithm to optimize thei

189 a sample of individuals that make use of the expectation-maximization (EM) algorithm to overcome the

190 The principle is to use the Expectation-Maximization (EM) algorithm to resolve doubl

191 We implement an Expectation-Maximization (EM) algorithm with mean field-

192 PartCNV uses an expectation-maximization (EM) algorithm with mixtures of

193 The program employs an expectation-maximization (EM) algorithm with parameters

194 This new method was implemented via an expectation-maximization (EM) algorithm without the usua

195 es of model parameters are obtained using an expectation-maximization (EM) algorithm, and pseudogenes

196 We present an expectation-maximization (EM) algorithm, derived for rec

197 When coupled with the Expectation-Maximization (EM) algorithm, reads can be as

198 such essential domains, we have developed an Expectation-Maximization (EM) algorithm-based Essential

199 on a case-parent trio family design, we use expectation-maximization (EM) algorithm-derived haplotyp

200 eding coefficients from NGS data based on an expectation-maximization (EM) algorithm.

201 n be adaptively estimated from the developed expectation-maximization (EM) algorithm.

202 alization procedure that, when combined with expectation-maximization (EM) algorithms for parameter e

203 In this report, we extended expectation-maximization (EM) algorithms to incorporate

204 s, based on penalized likelihood methods and expectation-maximization (EM) algorithms, are studied an

205 tures for model reduction, and their related expectation-maximization (EM) algorithms.

206 We also propose an expectation-maximization (EM) based algorithm to estimat

207 proach combining a greedy algorithm with the Expectation-Maximization (EM) method for haplotype infer

208 hod utilizing a sequential Monte Carlo-based expectation-maximization (EM) optimization to improve pe

209 rther refine alignment accuracy, an optional Expectation-Maximization (EM) step is incorporated, whic

210 In this article, we developed an expectation-maximization (EM)-likelihood-ratio test (LRT

211 ruction with at least 120 maximum likelihood expectation maximization equivalent iterations, includin

212 Using EvoPrinterHD- and Multiple Expectation Maximization for Motif Elicitation-based com

213 s for promoter analysis using MEME (Multiple Expectation-maximization for Motif Elicitation)

214 Hidden Markov Models (HMMs) were used with Expectation/Maximization for denoising and for associati

215 rforms parameter estimation using a modified expectation maximization framework for a two-component b

216 MultiGPS is based on a generalized Expectation Maximization framework that shares informati

217 ParsSNP uses an expectation-maximization framework to find mutations tha

218 We then develop an expectation-maximization framework to obtain the automat

219 um (LD) statistics (Haploview) as well as by expectation-maximization haplotype phase inference (HAP)

220 tistical algorithms (both Gibbs sampling and expectation-maximization) in reconstructing haplotype ph

221 nd reconstructed by use of ordered-subset(s) expectation maximization, incorporating corrections for

222 econstructed by 2-dimensional ordered-subset expectation maximization into single-frame images and dy

223 An algorithm, based on Expectation-Maximization, is presented here for learning

224 tructed using a 3-dimensional ordered-subset expectation maximization iterative algorithm with analyt

225 state-of-the-art methods, including K-means, expectation maximization, latent Dirichlet allocation-ba

226 ier, and brain tissue segmentation using the expectation maximization-Markov random field (EM-MRF) me

227 ionally efficient version of the Monte Carlo expectation-maximization (MCEM) algorithm.

228 carried out using a Markov chain Monte Carlo expectation-maximization (MCMC-EM) algorithm, and inform

229 An expectation maximization method assigns likelihood value

230 We present a weighted-log-likelihood expectation maximization method on isoform quantificatio

231 The AEDs were determined using the expectation maximization method, a numerical method that

232 ring accuracy can be achieved using the soft expectation maximization method, whereby each sequence i

233 DNA interactions, which is trained using the expectation maximization method.

234 the adsorption energy distribution using the expectation-maximization method.

235 jection (IFBP) and the maximum likelihood by expectation maximization (ML-EM) reconstruction algorith

236 on (FBP) and an iterative maximum-likelihood expectation maximization (MLEM) algorithm incorporating

237 ltered backprojection and maximum-likelihood expectation maximization (MLEM).

238 s, we developed a clustering method based on expectation maximization of a Gaussian mixture that acco

239 We present EMBER (Expectation Maximization of Binding and Expression pRofi

240 unctions for estimating model parameters, by expectation maximization or related approaches; however,

241 computational haplotype construction with an expectation-maximization or Bayesian statistical algorit

242 asurements indicated that the ordered-subset expectation maximization (OSEM) algorithm may produce le

243 econstructed using a standard ordered subset expectation maximization (OSEM) algorithm with (N=21) an

244 ction was performed using an ordered-subsets expectation maximization (OSEM) algorithm with compensat

245 nstruction, such as with the ordered-subsets expectation maximization (OSEM) algorithm, improves diag

246 were modeled in an iterative ordered-subset expectation maximization (OSEM) algorithm.

247 uctions were performed with 2 ordered-subset expectation maximization (OSEM) algorithms: attenuation-

248 ges were reconstructed using ordered-subsets expectation maximization (OSEM) and a fully convergent i

249 riance characteristics of the ordered-subset expectation maximization (OSEM) and rescaled block-itera

250 Ordered-subsets expectation maximization (OSEM) is popular for PET studi

251 on and also with standardized ordered-subset expectation maximization (OSEM) known to fulfill EANM ha

252 ratio for a range of BPL and ordered-subset expectation maximization (OSEM) reconstructions on a PET

253 ratio for a range of BPL and ordered-subset expectation maximization (OSEM) reconstructions on a PET

254 nal reconstruction method of ordered-subsets expectation maximization (OSEM) with 28 subsets and with

255 iltered backprojection (FBP); ordered-subset expectation maximization (OSEM) with attenuation correct

256 onstruction package including ordered-subset expectation maximization (OSEM) with depth-dependent 3-d

257 red backprojection (FBP) and ordered-subsets expectation maximization (OSEM) without any scatter or a

258 ructed with ordinary Poisson ordered-subsets expectation maximization (OSEM), additional time-of-flig

259 anner and reconstructed using ordered-subset expectation maximization (OSEM), OSEM with point-spread

260 in SPECT reconstruction using ordered-subset expectation maximization (OSEM).

261 image reconstruction via the ordered-subsets expectation-maximization (OSEM) and attenuation-weighted

262 T attenuation correction and ordered-subsets expectation maximization [OSEM] reconstruction) were ret

263 the computational efficiency of LLR, a novel expectation-maximization-path (EM-path) algorithm has be

264 tion methodology, which we call perturbation expectation-maximization (pEM), that simultaneously anal

265 econstructed using 2 methods: ordered-subset expectation maximization (PET(OSEM)) or ordered-subset e

266 ctions of a single tumor, and we describe an expectation-maximization procedure for estimating the cl

267 We derive an Expectation-Maximization procedure with closed-form upda

268 Dynamic filter employs an expectation-maximization process to adjust the kinetic m

269 The maximum-likelihood expectation maximization reconstructed image of a point

270 modeling in ordinary Poisson ordered-subset expectation maximization reconstruction on quantitative

271 acquisition per bed position; ordered-subset expectation maximization reconstruction with at least 12

272 ed (18)F-FDG PET/CT studies (ordered-subsets expectation maximization reconstruction, CT attenuation

273 in list-mode time-of-flight ordered-subsets expectation maximization reconstruction, similar to the

274 esolution using 3-dimensional ordered-subset expectation maximization reconstruction.

275 o compare it to a widely used ordered-subset expectation-maximization reconstruction (Flash3D).

276 earning mechanism, based around such spiking expectation maximization (SEM) networks whose combined o

277 MNase-seq data, we introduce the size-based expectation maximization (SEM) nucleosome-calling packag

278 imputed using single nucleotide polymorphism-expectation maximization (SNP-EM).

279 The proposed algorithm, expectation-maximization sparse discriminant analysis (E

280 to fit the proposed models by incorporating Expectation-Maximization steps into the extremely fast c

281 g counting when sequences are labelled or by expectation maximization, such as the Baum-Welch algorit

282 ramework combining statistical inference and expectation maximization to fully reconstruct 2-simplici

283 ore sequencer using M13 genomic DNA and used expectation maximization to obtain robust maximum-likeli

284 We develop an algorithm based on Expectation-Maximization to estimate the process noise p

285 o deconvolute different effects, and employs expectation-maximization to iteratively estimate sgRNA k

286 Our method uses Expectation-Maximization to overcome the challenge of pa

287 We compute the model using a two-stage Expectation-Maximization-type algorithm, first fixing th

288 rrent clinical gold standard-ordered-subsets expectation maximization-using CT-based AC in PET/CT, as

289 Two semiautomatic algorithms, expectation maximization, weighted intensity, a priori i

290 e and multivariable analysis measured by the expectation maximization, weighted intensity, a priori i

291 0 frames, 3-6 s/frame, using ordered-subsets expectation maximization with 4 iterations and 32 subset

292 All reconstructions used ordered-subset expectation maximization with attenuation modeling.

293 using a list-mode unrelaxed ordered-subsets expectation maximization with chronologically ordered su

294 those reconstructed using maximum-likelihood expectation maximization with nonuniform attenuation cor

295 the model parameters may be estimated using expectation maximization with only a very limited amount

296 n maximization (PET(OSEM)) or ordered-subset expectation maximization with point-spread function (PET

297 on and Q.Clear (block-sequential regularized expectation maximization with point-spread function mode

298 We have developed Monte Carlo Expectation-Maximization with Modified Cross-Entropy Met

299 del reduction, we created bursty Monte Carlo expectation-maximization with modified cross-entropy met

300 good (r=0.77, P<0.001), while ordered subset expectation maximization without splines led to decrease