ライフサイエンスコーパス: faecal

1 Faecal 16S ribosomal RNA gene analysis was undertaken.

2 Using faecal 16S ribosomal RNA gene sequences and host genotyp

3 More than 90% of the faecal alginate was insoluble in water, which may explai

4 un metagenomic sequencing were used to track faecal AMR gene abundance and diversity and microbiome a

5 networks of hundreds of interconnected human faecal and environmental samples from two low-income Lat

6 Faecal and ileal samples were collected on days 5, 11, 2

7 tivities were analysed, and changes in pouch faecal and mucosal microbiota assessed by 16S rRNA gene

8 Following FMT, there were variable shifts in faecal and mucosal microbiota composition and, in some p

9 A gene sequencing of the gut microbiota, and faecal and plasma short-chain fatty acids (SCFAs) determ

10 ovisioning and (3) plastic concentrations in faecal and regurgitated pellets from dippers increase wi

11 me was involved in a dialogue between 71% of faecal, and 15% of blood, metabolites.

12 Lastly, faecal androgen metabolites replicated the findings deri

13 to a transmission barrier caused by ungulate faecal avoidance.

14 e it has been shown that when incubated with faecal bacteria 3-DG strongly depressed this microbial c

15 ed excreta management strategies in reducing faecal bacteria and resistance genes in these settings r

16 ble curcuminoids + curcuminoids converted by faecal bacteria) delivered in yoghurts was 19-34%, depen

17 along with additional taxa, suggesting that faecal bacterial communities may merely subsample the gu

18 Faecal bacterial diversity was significantly reduced in

19 ficant differences in the alpha diversity of faecal bacterial species and found that richness and div

20 found that the relative abundance levels of faecal Bacteroides are negatively correlated with brain

21 on are promising non-invasive biomarkers for faecal-based CRC screening.

22 search articles including 6475, 783 and 5569 faecal-based miRNA tests in CRC, adenoma patients and he

23 Faecal bile salt hydrolase activity was measured using a

24 Azithromycin reduced faecal biomarkers of environmental enteropathy (calprote

25 ol group before and after random assignment: faecal calprotectin >/=250 mug/g, C-reactive protein >/=

26 Faecal calprotectin (FC) is one of the most widely used

27 Faecal calprotectin (FC), Gastrointestinal Symptoms Rati

28 The performances of faecal calprotectin (fcal), clinical and serologic param

29 omarkers of intestinal inflammation, such as faecal calprotectin and C-reactive protein, have been re

30 Change in faecal calprotectin as a marker of intestinal inflammati

31 The AUC of baseline faecal calprotectin for the prediction of flare occurrin

32 enomic profiles were broadly correlated with faecal calprotectin levels (a measure of gut inflammatio

33 t Crohn's disease involving the small bowel, faecal calprotectin predicts short-term flare risk, wher

34 hosphataemia and symptomatic adverse events, faecal calprotectin, C-reactive protein, albumin, platel

35 Faecal calprotectin, colonic biopsies and magnetic reson

36 In addition, faecal calprotectin, faecal zonulin and serum lipopolysa

37 Faecal calprotectin, thyroid tests, celiac serology, bre

38 t and efflux, leading to increased serum and faecal cholesterol levels.

39 Faecal coliform antibiotic sensitivities were analysed,

40 hods remain important to assess viability of faecal coliforms in disinfected water sources.

41 ards were poorly associated with plate count faecal coliforms, but flagged up by the MinION screening

42 4 through day 26, which was the last day of faecal collection.

43 kiwifruit fibre and led to higher ileal and faecal concentrations of short-chain fatty acids (P<0.05

44 Faecal contamination from the main reservoir hosts (live

45 hat are radically more effective in reducing faecal contamination in the domestic environment than th

46 Faecal contamination of meat, especially chicken, during

47 hly stable--they are not affected by soil or faecal contamination, can be collected on filter paper a

48 molecular microbiology methods that indicate faecal contamination.

49 NEO sample measurements following: dirt and faecal contamination; storage at room temperature; diffe

50 Faecal corticosterone metabolites (FCM) levels, offsprin

51 genic with similar fermentabilities in human faecal cultures and arabinose-rich POS2 had the greatest

52 usion level decreased the apparent ileal and faecal digestibilities of several nutrients (P<0.05), in

53 of several nutrients (P<0.05), including the faecal digestibility of insoluble kiwifruit fibre and le

54 o maintain blinding with respect to urine or faecal discolouration) administered as oral tablets.

55 enus Presbytis through shotgun sequencing of faecal DNA (P. femoralis femoralis, P. f.

56 By deep metagenome sequencing of faecal DNA from 287 pigs, we identified 7.7 million non-

57 A genes, we amplified and then pyrosequenced faecal DNA from stool samples.

58 nd empirical study how shotgun sequencing of faecal DNA is a still underutilized but powerful tool fo

59 amplicons from a range of environmental and faecal DNA samples.

60 We conclude that faecal DNA should be more widely used for clarifying spe

61 et of 18S V4-region amplicons generated from faecal DNAs using universal eukaryote primers showed tha

62 modulates LPMC immune responses and reduces faecal dysbiosis.

63 erum antibody ELISA, copro-antigen ELISA and faecal egg counting can be useful in distinguishing betw

64 We examined how reproduction influenced faecal egg counts (FEC) of strongyle nematodes using dat

65 We carried out 1,977 faecal egg counts (FECs) across five years to estimate n

66 icantly higher intake (24.0mumolTrolox/day), faecal excretion (0.604mumolTrolox/day), and uptake (23.

67 The result from the 10 faecal extraction protocols were investigated in terms o

68 Faecal extracts contain several unconjugated bile acids

69 tivated by peripheral stimulation with mouse faecal extracts.

70 of nisin A and its antimicrobial effect in a faecal fermentation in comparison with nisin A and H.

71 The in-vitro human faecal fermentation study revealed no significant differ

72 r-molecular-weight phenolics over 48hours of faecal fermentation, with a concurrent increase in low-m

73 anced lactobacilli growth during mixed batch faecal fermentation.

74 RAP and ORAC values) moving from digested to faecal fermented samples.

75 ure) were prospectively recruited, and their faecal gut microbiome was assessed using 16S rRNA sequen

76 Using a germ-free mouse model, we found that faecal/gut microbiota derived from dusp6-deficient mice

77 More broadly, we show that faecal habitats are likely untapped reservoirs of microb

78 A wide diversity of organisms utilize faecal habitats as a rich nutrient source or a mechanism

79 l tests for haemoglobin (FIT), which examine faecal haemoglobin concentrations (f-Hb), assist in deci

80 et al. in BMC Gastroenterology evaluated the faecal haemoglobin, age and sex test (FAST) score in the

81 Faecal headspace analysis was carried out using selected

82 ated longitudinal changes in VOCs present in faecal headspace in two mouse models of T2D - Cushing's

83 We report an optimised pipeline for faecal host DNA analysis from the point-of-collection to

84 approach to mouse stool analysis, to enable faecal host DNA studies in animal disease models as well

85 ion, isolation, and quantitative analysis of faecal host DNA.

86 We propose faecal IgA as one marker of microbial variability and co

87 able by faecal transplantation and driven by faecal IgA differences.

88 le bacteria in IgA-low mice dominantly lower faecal IgA levels in IgA-high mice after co-housing or f

89 Current state-of-the-art method of Faecal Immunochemical Testing achieving sensitivity ~90%

90 Quantitative faecal immunochemical tests for haemoglobin (FIT), which

91 e, home-based stool testing (consistent with Faecal Immunochemical Tests; FIT) or triennial colonosco

92 we show that microbially driven dichotomous faecal immunoglobulin-A (IgA) levels in wild-type mice w

93 The most commonly investigated was faecal incontinence (32 studies, 91%).

94 ng the efficacy of primary interventions for faecal incontinence are few in number.

95 In women with normal stool consistency and faecal incontinence bothersome enough to seek treatment,

96 ants aged 18 years or older with substantial faecal incontinence for whom conservative treatments (su

97 All participants received a standardised faecal incontinence patient education pamphlet and were

98 Women with at least one episode of faecal incontinence per month in the past 3 months were

99 eater reduction in the number of episodes of faecal incontinence per week compared with 32 (31%) of 1

100 as a 50% or greater reduction in episodes of faecal incontinence per week.

101 ry endpoint was change in St Mark's (Vaizey) faecal incontinence severity score between baseline and

102 oup, randomised controlled trial (CONtrol of Faecal Incontinence using Distal NeuromodulaTion [CONFID

103 e these are common first-line treatments for faecal incontinence, clinicians could consider combining

104 may lead to new treatments for diseases like faecal incontinence.

105 loss of this tone leads to disorders such as faecal incontinence.

106 that had the skills to manage patients with faecal incontinence.

107 ation (PTNS) is a new ambulatory therapy for faecal incontinence.

108 stimulation in the treatment of adults with faecal incontinence.

109 t sham electrical stimulation in adults with faecal incontinence.

110 f the total bacterial load, the abundance of faecal indicator bacteria (FIB; E. coli and Enterococcus

111 uggest that TLF and HLF are more mobile than faecal indicator bacteria and larger pathogens in ground

112 autionary indicators of microbial risks than faecal indicator bacteria in groundwater-derived drinkin

113 ociated with the presence and enumeration of faecal indicator bacteria in groundwater.

114 pendent experiments performed with different faecal inocula, while nine other Firmicutes OTUs showed

115 In mixed-culture fermentations with faecal inoculate, the digested acai pulp precipitated re

116 ples should be fermented with the same fresh faecal inoculum in order to decrease variability.

117 be Streptococcus agalactiae DPC7040, a human faecal isolate, which exhibits antimicrobial activity ag

118 attle) and representing 15 (4%) of 360 human faecal isolates (but only three [1%] of 293 from bactera

119 Women taking UDCA had higher faecal lithocholic acid (p < 0.0001), with more unconjug

120 e of which appear to occur preferentially in faecal material, in particular cercomonads and glissomon

121 e association of ambrein formation in ageing faecal material, under moist, oxygen-depleted conditions

122 Thus, the aim of this study was to identify faecal maternal semiochemicals that attract piglets and

123 be useful novel chemical indicators of aged faecal matter and decomposed bodies.

124 i (coliphages) have been used as a proxy for faecal matter and water quality from a variety of enviro

125 genomes have been identified exclusively in faecal matter of various vertebrate species and from ins

126 ur results support the proposal that sinking faecal matter represents a mechanism by which floating p

127 e marine mega-herbivores consume and pass in faecal matter viable seeds for at least three seagrass s

128 One to two seagrass seeds per g DW of faecal matter were found during the peak of the seagrass

129 and is expelled into the environment within faecal matter.

130 between the microbiome and the systemic and faecal metabolic environments.

131 metabolites for future unambiguous and rapid faecal metabolite annotations.

132 ppear to be mediated by the abundance of the faecal metabolite N-carbamylglutamate.

133 DMSO was used for the first time to extract faecal metabolites and enabled the detection of certain

134 ining the chemical shift ranges of 81 common faecal metabolites for future unambiguous and rapid faec

135 Cs), gut microbiota composition and targeted faecal metabolites were identified in a cross-sectional

136 Then, using 673 blood and 713 faecal metabolites, we found metabolic pathways to be as

137 o be associated with 34% of blood and 95% of faecal metabolites, with over 18,000 significant associa

138 The human faecal metabolome is complex, but rich in information an

139 The faecal metabolome is still much less explored than the p

140 e processing methods for measuring the human faecal metabolome using proton nuclear magnetic resonanc

141 ly significant differences in their volatile faecal metabolome when compared to their respective WT l

142 gut microbiome diversity and composition and faecal metabolomic profiles in middle aged and elderly w

143 spectra applied for the first time to human faecal metabolomics.

144 d microbiota alterations in the quantitative faecal metagenomes of the cross-sectional MetaCardis Bod

145 60,664 draft prokaryotic genomes from 3,810 faecal metagenomes, from geographically and phenotypical

146 elected resistance to 16 antibiotics from 21 faecal metagenomic expression libraries.

147 While faecal metagenomics provided a good approximation of the

148 during mixed culture with porcine or bovine faecal microbes possessing beta-glycoside-hydrolysing ac

149 Understanding how faecal microbes respond to shifts in meteorological patt

150 een acute infections by GI helminths and the faecal microbial and metabolic profiles of a cohort of e

151 sults demonstrate a clear link between diet, faecal microbial community composition and behaviour.

152 NA gene sequencing data showed diet affected faecal microbial community structure.

153 ree wild-type and NLRP6-deficient hosts with faecal microbial transplantation from specific pathogen-

154 In this observational study, faecal microbiome composition data obtained from 16S rDN

155 Whereas methods for studying faecal microbiome DNA are plentiful, there is a lack of

156 The faecal microbiome of (Casp1, Ifngr, Nos2)(-/-) mice diff

157 Furthermore, the faecal microbiomes of the captive koalas were similar to

158 This study compares the faecal microbiota and behaviour of 10 naive ponies.

159 exist between dietary induced alterations to faecal microbiota and behaviour.

160 treatment and correlate the pre-inflammation faecal microbiota and microbiome composition with subseq

161 e aims of this study were to examine how the faecal microbiota composition changed before, during and

162 and prevented the colitis-associated loss in faecal microbiota diversity.

163 ated in young germ-free mice, colonized with faecal microbiota obtained from two twin pairs at 6 and

164 We characterized the faecal microbiota of 4 breastfed infants and 4 formula-f

165 he developing microbiome; in particular, the faecal microbiota of animals with heavy worm infection b

166 loyed sequencing technologies to investigate faecal microbiota only.

167 Faecal microbiota transplant into germ-free mice replica

168 Faecal microbiota transplantation (FMT) has shown promis

169 Faecal microbiota transplantation (FMT) is effective in

170 A regulatory approach for faecal microbiota transplantation could be inserting fae

171 Efficacy of faecal microbiota transplantation for patients with irri

172 icrobiota transplantation could be inserting faecal microbiota transplantation in the gene-, cell- an

173 At present, faecal microbiota transplantation is only recommended in

174 During faecal microbiota transplantation, stool from a healthy

175 novel therapeutic approach of interest, and faecal microbiota transplantation-the transfer of prescr

176 uding prebiotics, probiotics, synbiotics and faecal microbiota transplantation.

177 opment of microbiome-based therapies such as faecal microbiota transplantation.

178 s observed in the same set of subjects after faecal microbiota transplantation.

179 leal gene expression, and ileal, rectal, and faecal microbiota were assessed.

180 reactive protein (CRP), the diversity of the faecal microbiota, quality of life (QoL) assessments and

181 e qualitative and quantitative change of the faecal microbiota, which may explain its clinical effica

182 s, these reports have primarily analysed the faecal microbiota.

183 inuous flow fermentors inoculated with human faecal microbiota.

184 nd 16S sequencing to characterise rectal and faecal microbiota.

185 mals is a common land use in New Zealand and faecal microorganisms from them often end up in waterway

186 In conclusion, faecal miR-21, miR-92a and their combination are promisi

187 d a meta-analysis to evaluate the utility of faecal miRNAs as a non-invasive tool in colorectal cance

188 ents with alcoholic hepatitis have increased faecal numbers of E. faecalis.

189 Participants who tested positive for faecal occult blood and who were eligible for and consid

190 was referred for colonoscopy with a positive faecal occult blood test as part of the UK national bowe

191 Cancer Screening Programme (asymptomatic but faecal occult blood testing [FOBt] positive).

192 en aged 55 years in addition to the biennial faecal occult blood testing programme offered to all ind

193 and sharing a facility is protective against faecal-oral exposure (OR 0.18 95% CI 0.10, 0.34 and OR 0

194 example, viruses that are transmitted by the faecal-oral mode of infection are rarely enclosed in a l

195 rectly transmitted to the human host via the faecal-oral route and can cause toxocariasis and associa

196 no change in infection risk is detected for faecal-oral route diseases.

197 nt transmission or circulation in areas with faecal-oral transmission.

198 colon of 3, 12, 18 and 24-month old mice and faecal output and water content monitored under control

199 Faecal output and water content were reduced in aged ani

200 T signalling underlie age-related changes in faecal output in mice and whether these changes were due

201 n invertebrate density in pooled, artificial faecal pats on the island of Islay.

202 The effects of microplastics on faecal pellet properties are currently unknown.

203 the size, density and sinking rates of salp faecal pellets ( p-value < 0.05 in each instance).

204 easonal contribution to POC flux in terms of faecal pellets (FP), exuviae and carcasses from sediment

205 blooms and bulk egestion of rapidly sinking faecal pellets (FPs).

206 es colonies and disseminates spores both via faecal pellets and through adherence to its hydrophobic

207 Here we test the hypotheses that (1) faecal pellets are a vector for transport of microplasti

208 sinking rates of zooplankton egests and, (3) faecal pellets can facilitate the transfer of plastics t

209 tial future scenarios, however, up to 46% of faecal pellets contained microplastics.

210 rranean and the South Pacific Gyre, only few faecal pellets had microplastics incorporated within the

211 eased by 1.35-fold (95% CI = 1.18, 1.56) for faecal pellets with polyethylene microplastics and 1.47-

212 )) the copepod Calanus helgolandicus egested faecal pellets with significantly (P < 0.001) reduced de

213 carbon transported downward through sinking faecal pellets, daily vertical migration and seasonal hi

214 By concentrating oocysts in faecal pellets, snails may facilitate entry of T. gondii

215 1 mm), which are later egested within their faecal pellets.

216 rticulate organic matter in the form of salp faecal pellets.

217 The faecal percentage primary BA was inversely related to Se

218 r perforated diverticulitis with purulent or faecal peritonitis (Hinchey III or IV disease) in a rand

219 e been proposed that can identify sources of faecal pollution in environmental waters.

220 DA) with a strip test for detecting ruminant faecal pollution sources.

221 at) Mission. However, the goal of completely faecal-pollution free, clean drinking water is yet to be

222 parvula) [4], we combine sound playbacks and faecal presentations to demonstrate that anthropogenic n

223 reased the lithocholic/deoxycholic bile acid faecal ratio, a risk factor for colon cancer, in both HF

224 mortem during the microbial decomposition of faecal residues and tissues.

225 Data was analysed according to faecal sample donor feeding type: breast-fed (BF) or for

226 30 schools; 4276 (71.9%) children provided a faecal sample for examination.

227 d in 50% of regurgitates (n = 74) and 45% of faecal samples (n = 92) collected non-invasively from ad

228 Salmonella was isolated from faecal samples and antimicrobial susceptibility was anal

229 equence type known for its ubiquity in human faecal samples and in food samples.

230 rs showed that core-cercozoan assemblages in faecal samples are as diverse as those found in more con

231 ress these questions, we collected 102 snail faecal samples as a proxy for diet, and 102 matched-leaf

232 By using DNA metabarcoding to analyse 1,281 faecal samples collected across multiple seasons, we com

233 ncing results of 131 paired rectal swabs and faecal samples collected from 116 infants at two timepoi

234 bolome in 88 African-American newborns using faecal samples collected in the first few days of life.

235 Testing 1556 faecal samples from 11 field sites, we identify high pre

236 read PacBio SMRT sequencing was conducted on faecal samples from 21 wild and domesticated herbivores.

237 sequencing and profile mock communities and faecal samples from healthy and ill preterm infants.

238 and functional potential characterization of faecal samples from hunter-gatherer and traditional agri

239 Amino acids and glucose were increased in faecal samples from the same cohort, which indicated the

240 Faecal samples from week 7 had a significantly lower mic

241 use of rectal swabs as a reliable proxy for faecal samples in infant gut microbiota research.

242 The bacterial biofilm and faecal samples included Enterococcus faecalis and Entero

243 an 100 OTUs being significantly different in faecal samples obtained from WT mice at 3 days and 7 day

244 articularly high prevalence and abundance in faecal samples of healthy breastfed infants, a phenomeno

245 e same family as Achatinella to confirm that faecal samples reflect gut contents.

246 ther rectal swabs give comparable results to faecal samples regarding microbiota community compositio

247 many factors including the need to transport faecal samples to a laboratory for compositional analysi

248 gical data, anthropometric measurements, and faecal samples to identify enteropathogens at enrolment,

249 Gut bacterial communities in faecal samples were analysed by sequencing the V1-V3 reg

250 erial flora of nasogastric feeding tubes and faecal samples were analysed for a low-birth weight (725

251 Faecal samples were collected and analysed with duplicat

252 A total of 590 faecal samples were collected at four roosting sites in

253 On each farm, faecal samples were collected from a random sample of an

254 Faecal samples were collected from eight sows during ges

255 Rotavirus positive faecal samples were collected from laboratories Australi

256 Faecal samples were collected weekly, while the subjects

257 curated list of bacterial genomes from human faecal samples with over 21000 additional reference geno

258 ombining continent-wide DNA metabarcoding of faecal samples with species distribution modelling.

259 burdens (measured via parasite egg counts in faecal samples) were associated with specific compositio

260 bs contained all of the diversity present in faecal samples, along with additional taxa, suggesting t

261 cus champanellensis, was isolated from human faecal samples, and its genome was recently sequenced.

262 ic datasets obtained from human adult/infant faecal samples, thereby supporting the notion that bifid

263 rains, recovered from both feeding tubes and faecal samples, were whole genome sequenced using Illumi

264 multiple visible and near-infrared images of faecal samples.

265 ed to the butyrate-producing capacity in the faecal samples.

266 give metabolites that are detected in human faecal samples.

267 The study indicated that faecal SCFA could be a non-invasive, valid and reliable

268 with systolic and diastolic blood pressure, faecal SCFAs, Bacteroides plebeius and Bacteroides copro

269 matography-mass spectrometry revealed higher faecal SCFAs, including butyrate, propionate, valerate,

270 Faecal secretory IgA immune responses were recorded agai

271 Faecal semiochemicals were extracted and identified usin

272 d or unvaccinated people for the duration of faecal shedding at the end of the study.

273 lted in almost a 0.3 log reduction of type 2 faecal shedding compared with the IPV-only schedule.

274 seroconversion and titres to serotype 2 and faecal shedding for 4 weeks after a monovalent OPV type

275 ts who did not receive mOPV2, as assessed by faecal shedding of Sabin 2 by reverse transcriptase quan

276 However, faecal shedding of Sabin 2 in household contacts was inc

277 Faecal shedding of Sabin 2 in infants who did not receiv

278 ed for adverse events, immune responses, and faecal shedding of the vaccine virus for 28 days.

279 f these vaccines, the presence and extent of faecal shedding, and the neurovirulence of shed virus.

280 f F. necrophorum would be challenging due to faecal shedding.

281 Faecal short chain fatty acid (SCFA) and urinary volatil

282 This study evaluated the properties of faecal short-chain fatty acids (SCFA) as diagnostic biom

283 ability to extract metabolites directly from faecal slurry or after freeze-drying.

284 Direct extraction of faecal slurry was proved to be more reproducible than fr

285 ely, over 7 days despite extreme conditions (faecal slurry).

286 cing Escherichia coli (ESBL-EC) emitted from faecal sources in surface water, and the probability of

287 s similar to those of the major accompanying faecal steroids.

288 which may resulted from the higher (p<0.05) faecal TAG and TC contents.

289 nd either were positive for S stercoralis in faecal tests and on serology (any titre) or had a positi

290 h high titres, irrespective of the result of faecal tests.

291 yer's patches of aged mice can be rescued by faecal transfers from younger adults into aged mice and

292 how increased damage that is transferable by faecal transplantation and driven by faecal IgA differen

293 iability and conclude that co-housing and/or faecal transplantation enables analysis of progeny from

294 levels in IgA-high mice after co-housing or faecal transplantation.

295 Use of germ-free mice and faecal transplants indicated that such changes in microb

296 all three serotypes and intestinal immunity (faecal viral shedding post-challenge) to serotype 2, ana

297 esent the first study showing differences in faecal VOC profiles between children with SAM who surviv

298 Here we determine whether analysis of faecal VOCs could identify children with SAM with increa

299 Faecal volatile organic compounds (VOCs) reflect the mic

300 In addition, faecal calprotectin, faecal zonulin and serum lipopolysaccharides were assess