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1 iable effect on allergen PC15 (2-fold to 500-fold change).
2 ally abundant between phases (P < 0.05, >/=2-fold change).
3 and 2 had a slight increase in IC50 (3- to 5-fold change).
4 ty (e.g. the equivalent to a gene expression fold-change).
5 WRKY70 were also found upregulated with high fold change.
6 of percentages, network analysis, and taxon fold change.
7 in both studies with concordant direction of fold change.
8 mmune responses were those with the greatest fold change.
9 ) by column(s) such as p-value, q-value, and fold change.
10 ime points, with 95% confidence intervals on fold-change.
11 ssification of signals based on the observed fold changes.
12 occupancy changes at FLC did not reflect RNA fold changes.
13 onsiderably less power for detecting smaller fold changes.
15 lar for cluster-2 versus cluster-1 (relative fold-change, 0.99; 95% CI, .86-1.14; P = .91), but great
17 pants than male participants (geometric mean fold-change 1.33, 95% CI 1.06-1.68; p=0.014), and longer
18 P) being the most strongly upregulated (log2 fold-change 1.87, P = 0.0001) and its expression was ass
19 change -1.65, P=.02), and Clostridium (log2 fold change -1.47, P=.002) were underrepresented among s
20 log2 fold change -2.22, P=.009), Dorea (log2 fold change -1.65, P=.02), and Clostridium (log2 fold ch
23 ad decreased abundance of lipoxygenase (mean fold-change -13.1), an enzyme responsible for product sp
24 ed in pregnant women versus controls (median fold-change 2.60 vs 1.49 [interquartile range, 0.94-7.53
26 fold change -2.15, P=.003), Dialister (log2 fold change -2.22, P=.009), Dorea (log2 fold change -1.6
27 old change -3.41, P=.03), Oscillospira (log2 fold change -2.80, P=.03), Lactococcus (log2 fold change
28 in (mean fold-change -3.7) and legumin (mean fold-change -2.5) and concomitant increase in their low
29 99 genes (DEGs; false discovery rate P<0.05, fold change |2|, controlling for confounds) previously a
30 y PT antibodies increased post-immunization (fold-change, 2.64; 95% confidence interval [CI], 2.12-3.
31 2 fold change -3.19, P=.05), and Dorea (log2 fold change -3.00, P=.05) were underrepresented among su
32 fold change -2.80, P=.03), Lactococcus (log2 fold change -3.19, P=.05), and Dorea (log2 fold change -
34 or storage globulin proteins phaseolin (mean fold-change -3.7) and legumin (mean fold-change -2.5) an
35 alNAc was significantly increased in pooled (fold change = 3.33, p < 0.001) and individual (p = 0.009
36 eased in inflammatory lesional morphea skin (fold change = 30.6, P = 0.006), and preliminary transcri
39 the top 966 genes altered (>log2 = 1.8, 3.5-fold change), 670 genes were downregulated and 296 genes
40 reservoir did not change significantly (1.16-fold change; 95% confidence interval [CI], .70- to 1.92-
41 er, we describe and characterize log allelic fold change (aFC), the magnitude of expression change as
44 class correlation coefficient, and performed fold change analysis, which was further extended to inve
48 nt analysis (GSEA), a score that can combine fold change and P-value together is needed for better ge
49 oteins were identified on the basis of their fold change and statistical significance between groups.
50 ered between the ADG groups based on t-test, fold changes and partial least square discriminant analy
51 all cases, tuning leads to trade-offs in the fold-change and the ability to distinguish cellular stat
52 ads to more accurate estimates of expression fold-changes and tests of differential expression compar
53 ation, Y: +10 +/- 4 fold change; O: +4 +/- 2 fold change) and anabolic hormone milieu (testosterone,
55 d per cell, number of marker genes and their fold change, and number of single cells successfully pro
56 boptimal temperatures their induction range, fold change, and response to decreasing temperatures are
57 ificance (adjusted p = 0.0032), the greatest fold change, and was markedly elevated in colon and jeju
62 ontains the expression information including fold changes between normal and tumor samples for mRNAs
64 st estimating protein fold-changes from mRNA fold-changes between different cell-types, and highlight
66 olite analysis, showing that the accuracy of fold-change calculations can be significantly improved.
67 nge compression), implying that conventional fold-change calculations directly using MS signal intens
68 was highly influenced by the ACC (up to 631-fold change), chlorogenic acid was similarly influenced
69 80% of phosphosites exhibiting large (>/=1.5-fold) changes compared to control can be modulated by or
70 ulated from DEBtox parameters indicated a 27 fold change comparing exposure from 48 to 720 hours (sum
72 r real metabolic concentration ratios (i.e., fold-change compression), implying that conventional fol
74 genes (DEGs; false discovery rate <0.05; log-fold change cutoff = 0) from 36,007 expressed Populus ge
76 t that similar mechanisms of cell memory and fold change detection may be important in diverse signal
78 or binding to kappaB motifs, could reproduce fold-change detection across the experimentally measured
81 of TNF-NF-kappaB signaling, which implements fold-change detection from competition for binding to ka
84 evels of TNF-inducible transcription exhibit fold-change detection of NF-kappaB, which may buffer aga
86 aneously varied across promoters to maintain fold-change detection while also matching other trends i
94 Notably, these studies reveal modest (~1.5-3-fold change) effects on M. tuberculosis replication.
96 erase chain reaction (RT-qPCR) platforms for fold change estimates than for raw abundance estimates,
99 rentially expressed genes (DEGs) with log(2) fold change (FC) >|1| and 106 highly DEGs (log(2) FC >|2
101 5p were up-regulated in individuals with FL (fold change (FC) = 1.55, p = 1.36 * 10(-14) and FC = 1.2
105 f 428 differentially expressed genes (DEGs) (fold-change, FC >= 1.5; adjusted P <= 0.1) were identifi
106 thelial transcriptome, a total of 672 genes (fold-change, FC >= 1.5; adjusted-p <= 0.05) showed signi
107 egulations of antimicrobial peptides (S100A8/fold change [FCH], 13.04; S100A9/FCH, 11.28; CCL20/FCH,
109 he platform comes preloaded with logarithmic fold changes from 44 data sets on Mvarphi stimulation.
110 e results caution against estimating protein fold-changes from mRNA fold-changes between different ce
113 s showed suppression of glucagon at 120 min (fold change glucagon120/0 <1) during OGTT, whereas 21-34
114 In the longitudinal study, an increase of fold change glucagon120/0 was associated with an improve
115 ringent conditions (raw P-value < 0.05, log2 fold change > 0.5), we defined a 73-gene set characteris
119 total of 111 probesets (91 annotated genes, fold change > 2.0 and false discovery rate < 0.25) were
121 was detected for more than 3,500 genes (log2 fold change >/= 1, false discovery rate </= 0.01), many
122 oci and 247 hypermethylated loci were found (fold change >/=1.3; P < 0.005; cases vs. controls).
123 ons between groups were made with a combined fold change >/=2 and Student's t-test p-value < 0.05 to
124 kines with significant different expression (fold change >/=2 or </=-2, and q-value <5%) between expo
125 ts of miR-133a defined in unstressed hearts (fold change >/=25%, false discovery rate <0.02), only 4
126 d genes (false discovery rate of 0.1 and log fold change >0.75)], with many differentially expressed
127 ntly altered the abundance of 76 proteins (a fold change >1.4, or <0.6, p-value <0.05) and several of
129 wenty-seven differentially expressed miRNAs (fold change >1.5; P value <0.01) were identified, includ
131 es were differentially expressed in HDM APT (fold change >2 and false discovery rate < 0.05), with in
132 y expressed genes (DEG) (p < 0.05, FDR <0.1, fold change >2) between the BRSV challenged and control
133 is lesions versus in controls, respectively (fold change >= 2; false discovery rate [FDR] < 0.05).
134 xpressed genes between the three conditions (fold change >=0.5 in either direction; p < 0.05).
135 iabetes compared to those who did not (log(2)fold change >=1.25 and false discovery rate <=5%).
136 fferentially expressed compared with adults (fold-change >/= 50%, false discovery rate = 0.02) and th
137 erential gene expression (thresholds P<0.05; fold-change >1.5) and pathway activation (Ingenuity) wer
138 gnificantly up-regulated in SBNET (P < 0.05; fold-change >2) based on multiple normalization strategi
139 662 DEGs in nonlesional AD, vs healthy skin (fold-change >=2, FDR <0.05), with 100% sample recovery.
140 cross diseases for statistical significance (fold change>/=1.5 and false discovery rate</=0.05), to i
141 fy differentially expressed genes (criteria: fold change, >/= 2.0; false discovery rate </= 0.05) in
144 ssion analyses were performed using DESeq2 (|fold change|>1.5 and false discovery rate < 0.3), in pat
148 1 treatment resulted in significantly higher fold change in ASCs among patients with HBsAg <100 IU/ml
151 e discovery rate, 1040 genes exhibited >1.15-fold change in both conditions; 297 were upregulated and
154 ine deaminase, we obtained a approximately 3-fold change in enzyme activity by the photocontrolled mo
155 nd known long non-coding RNAs were ranked by fold change in expression between tumours that subsequen
158 red with their young adult counterparts when fold change in expression levels of GzmB, CD107a, IFN-ga
162 /Km ratios) and l (l-THA; approximately 5000-fold change in kcat/Km ratios) alternative substrates.
163 rred l-serine-O-sulfate ( approximately 1200-fold change in kcat/Km ratios) and l (l-THA; approximate
166 nse patterns change substantially over a 100-fold change in odor concentration, apparently degrading
169 n-based MRI contrast agent that provides a 9-fold change in relaxivity via switching between the Mn(3
171 mode against glucose and a subsequent 1,600-fold change in specificity of the ancestral protein.
172 n protein spots with the highest significant fold change in the cooked samples were involved in carbo
174 el of nuclear Smad3 varied across cells, the fold change in the level of nuclear Smad3 was a more pre
175 In undoped films we demonstrate more than 10-fold change in the thermal free-carrier concentration pr
176 onal work capacity is demonstrated over a 10-fold change in yarn cross-sectional area, which is impor
177 , diDO-IPTL quantification discriminates 1.5-fold changes in abundance of over 1000 proteins with 88%
178 aria episodes and showed significantly lower fold changes in CD4+PD1+ and CD4+PD1+LAG3+ compared to t
179 chemoprevention had no observable effect on fold changes in CD8 T cells expressing PD1 or CD160.
180 s that are reversible and responsible for 30-fold changes in conductivity of the metal-organic framew
181 hase grown crystals and exhibit reversible 8-fold changes in conductivity upon illumination at modest
183 Among them, 26 genes show more than two-fold changes in expression level in an OmpR knock-out st
184 t the FN nanofibers underwent 3.3-fold and 9-fold changes in length and width, respectively, and that
186 degree of unsaturation exhibited the highest fold changes in mixed fields compared to photons alone.
190 Isoform-specific differences include 18-fold changes in the maximum power output per myosin-1C m
192 ximum power output per myosin-1C motor and 4-fold changes in the velocity and the resistive force at
193 e substitution, and that there is a small (3-fold) change in the photokinetics of the forward reactio
195 ular function activation state (Z-score) and fold-change in AKT phosphorylation were calculated.Resul
196 veloped a mathematical model to quantify the fold-change in concentration of any molecule included in
198 integrated HIV DNA compared with blood (4.26 fold-change in DNA; 95% confidence interval [CI] = 2.61-
199 s identified a nearly perfect correlation of fold-change in expression for those differentially expre
200 = .045) and CD38+HLA-DR+ CD8+ T cells (1.40 fold-change in integrated HIV DNA per 1-unit increase in
201 grated HIV DNA with PD-1+ CD4+ T-cells (1.44 fold-change in integrated HIV DNA per 10-unit increase i
202 as the difference between the groups in mean fold-change in urinary Kidney Injury Molecule-1 (KIM-1).
204 s revealed changes (p-value </= 0.05, >/=1.5-fold change) in lipid, purine, and sterol metabolism in
206 gnificant metabolic features were found with fold changes larger than 1.5, and an additional 97 signi
208 than 2-fold (FDR corrected p-value </=0.032, fold change (log2) >/= 1) in response to gemfibrozil exp
209 ngly downregulated in PP versus normal skin (fold change < 0.25, 44.4-fold) and strongly upregulated
211 d out by their significance level (p-value), fold change, mass-to-charge ratio, retention time, and i
212 icantly increased proinflammatory cytokines (fold-change messenger RNA: interleukin-1beta = 7.6, mono
213 ctor-alpha = 2.2) and proteolysis effectors (fold-change messenger RNA: muscle RING-finger protein 1
214 ere selected by combined analysis of maximum fold changes (MFCs) in concentrations and P-values resul
215 adjacent breast tissues, including 74 with a fold change more than two of which 17 were never reporte
217 in CAD subjects compared to Non-CAD (NAD(+) fold change: non-CAD 1.00 +/- 0.17 vs. CAD 0.32 +/- 0.12
218 1.00 +/- 0.17 vs. CAD 0.32 +/- 0.12* and ATP fold change: non-CAD 1.00 +/- 0.294 vs. CAD 0.01 +/- 0.0
219 c gravity (2.3-fold), postacquisition median fold change normalization (1.8-fold increase), postacqui
220 for raw abundance estimates, suggesting that fold change normalization against a control is an import
221 A:DNA ratio and c-MYC induction: Y: +4 +/- 2 fold change; O: +1.9 +/- 1 fold change), translational e
222 ficiency (S6K1 phosphorylation, Y: +10 +/- 4 fold change; O: +4 +/- 2 fold change) and anabolic hormo
223 al inhibition studies to achieve significant fold changes observed by acetylation proteomics methods.
224 significantly differed (P < .05) with a log2 fold change of >/= 1.0 between patient groups were inter
225 nscription of 2692 genes (p value of <0.001, fold change of >/=2) after 7 days of exposure, whereas C
227 vaccine only (absolute difference of log(10)-fold change of 0.64 [95% CI 0.39 to 0.89]; p=0.0002) and
228 predictor of overall survival (HR for a two-fold change of 1.23, 95% CI 1.13-1.34; p<0.0001) and non
230 5 mg BLP) achieved plateau responses with a fold change of 1.5 after first vaccination that remained
231 n marker genes are expected to be only up to fold change of 2, choice of the single cell algorithm is
233 to achieve plateau responses with a maximum fold change of 2.4, whereas high-dose recipients (350 mu
234 e 1 protein following hypoxia-reoxygenation; fold change of 3.17 (P <= 0.05) and 6.97 (P <= 0.05) res
235 ound that when marker genes are expressed at fold change of 4 or more, either Seurat or SIMLR algorit
237 s. 74.9 days, respectively; 6.7-fold vs. 3.7-fold change of cytokines, respectively), suggesting the
238 symptomatic patients, the mean (SD; 95% CI) fold change of expression of proinflammatory mediators i
242 idobacterium spp. significantly decreased by fold change of individual operational taxonomic units in
243 n treatment difference in the geometric mean-fold change of normalised KIM-1 was 1.08 (95% CI 0.87-1.
244 studies are powered well for detecting large fold changes of ChIP enrichment over the control sample,
245 rnal PTSD were in opposite directions, while fold changes of shared DEGs associated with both materna
247 gest that miRNA and mRNA pairs with opposite fold changes of their expression and with inverted corre
248 n skin accounted for 54% of the variation in fold changes of urinary PAH metabolites (p < 0.002).
250 tivity levels indicated the up-regulation (6-fold change) of TcP5CDH during the infective stages of t
252 ients with Alzheimer's disease and controls (fold change) or the ratio between biomarker concentratio
253 ed proteins showed either a strikingly large fold-change, or were completely suppressed or newly indu
254 r expressed in PET false-negative cases (5.3-fold change, P < .001) which provides a mechanistic expl
255 tween children with PA and NA children (23.3-fold change, P < .01) and children with PS (18.5-fold ch
256 ilumab treatment signature of 821 probes (>2-fold change, P < .05) significantly modulated in the 300
258 of the differential proteome data sets (>/=2-fold change, P < 0.05), showed that several proteins inv
262 lorie intake increased among ES (1.5 +/- 0.2 fold-change, P = 0.02) but not controls (1.1 +/- 0.1 fol
264 ichment analysis of ranked DEGs (score = log fold change/p value) in the endocervix and ectocervix re
267 sed on these formulas predicts precisely the fold change r* of mRNA numbers from [Formula: see text]
268 d to non-cancer epithelium (p < 0.05, log(2) fold change range: -0.423 to -0.987), while no significa
269 7-5p, miR-25-3p, miR-92a-3p, and miR-29b-3p; fold change range: 0.64-83, p = 0.0002-0.01) and increas
271 and wnt9a) correlated more strongly with the fold change, rather than the level, of nuclear Smad3.
274 response than ADC, with 2.8-fold versus 1.3-fold changes, respectively, by day 5 of drug treatment.
276 entially expressed proteins (at least +/-1.5-fold change; Student's t test, P < 0.05) were identified
277 o use of fresh cells (95% probability of < 2-fold change), supporting continued use of frozen storage
279 is usually quantified as a continuous score-fold-change, test-statistic, P-value-comparing biologica
280 ng protein-substrate linker density up to 50-fold changed tethering, but did not affect osteogenesis,
281 odological variation, we generated and used 'fold change', that is, ratio of mean amyloid uptake (glo
283 Ciprofloxacin exposure shows an almost two-fold change throughout the treatment of pediatric ALL.
284 tion: Y: +4 +/- 2 fold change; O: +1.9 +/- 1 fold change), translational efficiency (S6K1 phosphoryla
285 tissues demonstrated that the consistency of fold-change trends in a single short amplicon between sn
286 were significantly upregulated, with median fold change values of 2.9, 31.7, 4.6, and 6.8, respectiv
293 entified and 740 proteins that presented a 4-fold change were considered a CRC proteomic signature.
294 ersus-control differential expression, their fold changes were </= 1.33, and an independent cohort yi
297 ntially expressed lncRNAs with more than 2.0-fold change when compared the expression profiles of P1
298 gle promoters and their resulting expression fold change will be altered with changes in affinity.
300 in vitro (false discovery rate, </=0.001; 2-fold change) with 557 showing decreased and 329 showing