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1 tion of aromatic amino acid side chains into genomic DNA.
2 removal of incorporated ddC from replicating genomic DNA.
3 e condensin, cohesin and SMC5/6) to organize genomic DNA.
4 r aldehyde functionalities known to exist in genomic DNA.
5 all other biological processes occurring on genomic DNA.
6 an accumulation of cytoplasmic fragments of genomic DNA.
7 ancient organisms that lack large amounts of genomic DNA.
8 reposition and reorganize nucleosomes along genomic DNA.
9 p dsDNA analytes, including both plasmid and genomic DNA.
10 judged from binding competition against bulk genomic DNA.
11 to identify the sequence of cut sites within genomic DNA.
12 ure of target DNA from a pool of interfering genomic DNA.
13 stranded breaks (DSBs) in murine macrophage genomic DNA.
14 moval of UV-induced direct photolesions from genomic DNA.
15 ctivity by controlling its ability to access genomic DNA.
16 nely evaluated with a PCR-based method using genomic DNA.
17 etion and reduced the L1-mediated nicking of genomic DNA.
18 pecific amplification by directly sequencing genomic DNA.
19 es and sequences the 4.8-Mbp MHC region from genomic DNA.
20 med Cas9 locates the target site by scanning genomic DNA.
21 ive cell birth dating measuring carbon-14 in genomic DNA.
22 that mediate the conversion of A*T to G*C in genomic DNA.
23 reventing the hyper-negative supercoiling of genomic DNA.
24 of protein-DNA interactions on synthetic and genomic DNA.
25 en the expanded repeat RNA and complementary genomic DNA.
26 the incorporation of high levels of rNMPs in genomic DNA.
27 s) enable targeted C*G-to-T*A conversions in genomic DNA.
28 TP-powered molecular motors to package their genomic DNA.
29 ir (RER) efficiently removes single rNMPs in genomic DNA.
30 mbers of spacers originating from the entire genomic DNA.
31 ere sequences at chromosomal ends to protect genomic DNA.
32 ine the structures of nucleosomes containing genomic DNA.
33 structures known as i-motif are prevalent in genomic DNA.
34 ntification of RNA, short linearized DNA, or genomic DNA.
35 elf-sufficient HACs that showed no uptake of genomic DNA.
36 ed DNAs, including circular plasmid DNAs and genomic DNAs.
37 l factories localized with replicating viral genomic DNAs.
38 of Cory's Shearwater (Calonectris borealis) genomic DNA, a model species for the study of olfaction-
39 stinguishable behaviors from random-sequence genomic DNA, AA-TT condenses in all alkaline earth metal
40 ty was achieved, with as low as 71-188 pg of genomic DNA able to be detected using mixtures of contro
41 ents (TRFs), along with MinION sequencing of genomic DNA allowed us to document the precise molecular
44 The limits of detection were 0.5ng/ml of genomic DNA and 10 colony-forming units (CFU)/ml of bact
46 es into the PCR products of Escherichia coli genomic DNA and accurately reconstruct the encoded data
47 xes in eukaryotes that provide compaction of genomic DNA and are implicated in regulation of transcri
48 1LG2 cis-regulatory regions were cloned from genomic DNA and assessed in full or by mutating and/or d
49 The nCATS sequencing requires only ~3 mug of genomic DNA and can target a large number of loci in a s
52 ct the rpoB gene in PCR-amplified samples of genomic DNA and could also discriminate between the wild
53 ified 1,741 unique AAV integration events in genomic DNA and expanded cell clones in five dogs, with
55 lyses of tough decoy abundance in hepatocyte genomic DNA and input plasmid pools identified several t
58 important cytosolic sensor of P. falciparum genomic DNA and reveal the role of the cGAS/STING pathwa
63 l to insert the 7-deazaguanine base in phage genomic DNA and that 2'-deoxy-7-deazaguanine modificatio
64 cluding the removal of UV photoproducts from genomic DNA and the activation of ATR/ATM DNA damage kin
66 to "write" programmed sequence changes into genomic DNA and thus promises significant technical adva
67 ndependent off-target adenine deamination in genomic DNA and very low levels of adenine deamination i
68 mation about how gyrase is distributed along genomic DNA and whether its distribution is affected by
69 of protein production, (ii) the digestion of genomic DNA, and (iii) the disruption of the cell membra
70 PCR analysis revealed presence of bacterial genomic DNA, and infection elicited significant immunogl
71 -reporter mice, polymerase chain reaction of genomic DNA, and quantitation of Bmp6 messenger RNA expr
72 pipelines designed to map rNMPs embedded in genomic DNA are customized for data generated using only
74 and hydroxyl radicals in vivo, and protected genomic DNA as well as sensitive enzymes from intracellu
75 have probed the interplay between chromatin (genomic DNA associated with proteins and RNAs) and trans
78 rated from 108 replicates, we found that one genomic DNA-based method and two non-unique molecular id
80 d with various concentrations of Aspergillus genomic DNA before extraction following international re
81 re anucleate cytoplasmic fragments that lack genomic DNA, but continue to synthesize protein using a
82 c principles of how the replisome duplicates genomic DNA, but little is known about its dynamics duri
84 geal specimens were tested for HBoV mRNA and genomic DNA by quantitative polymerase chain reaction.
88 le blood proves that the large mass of human genomic DNA captured from the lysed cells does not inhib
91 library constructed from randomly fragmented genomic DNA coupled with affinity selection for antibody
92 of the DNA repair protein XRCC1 to sites of genomic DNA damage and impacted the amount of accumulate
93 breast CSCs, penetrates the nucleus, induces genomic DNA damage, and prompts caspase-dependent apopto
96 e, we demonstrate that Plasmodium falciparum genomic DNA delivered to the cytosol of human monocytes
101 The ability to rewrite large stretches of genomic DNA enables the creation of new organisms with c
103 mosome (BAC) reporters using human and mouse genomic DNAs encompassing the TERT genes and neighboring
104 the detection of 5 copies of M. tuberculosis genomic DNA (equaling 0.3 cell) in real biofluids using
105 ratio method to determine telomere length in genomic DNA extracted from buccal smears from 63 patient
106 It can detect <10 copies of the gene in genomic DNA extracted from E. coli or K. pneumoniae clin
107 sensor cam distinguish multiple genes of the genomic DNA extracted from Escherichia coli and Campylob
108 ed and validated in samples of non-amplified genomic DNA extracted from genetically modified (GM)-Soy
113 cation for the HIV env gene was performed on genomic DNA extracts from different CD4(+) T cell subset
115 G level using sodium bisulfite conversion of genomic DNA followed by sequencing or array hybridizatio
116 d from sequencing M. perstans and M. ozzardi genomic DNA for new repeat biomarker candidates which we
117 ir targets by scanning and interrogating the genomic DNA for sequences complementary to the gRNA.
119 studies suggest noncoding RNAs interact with genomic DNA, forming an RNA*DNA-DNA triple helix that re
120 pproaches, microfluidic partitioning of long genomic DNA fragments and barcoding of shorter fragments
123 entify a G > C transversion present in human genomic DNA from a ductal carcinoma cell line, a mutatio
126 DNA libraries are constructed using native genomic DNA from any source of interest, preserving cell
127 eloped a method for the rapid preparation of genomic DNA from bacteria based on hydrophilic ionic liq
130 e absence of nonspecific amplification using genomic DNA from human or DNA from other closely-related
131 lective amplification of Wolbachia pipientis genomic DNA from infected Drosophila melanogaster and My
133 sent in normal cells, similar to findings in genomic DNA from normal tissues of GI tumor patients.
135 oned from the patient as well as in cDNA and genomic DNA from other individuals, suggesting that gene
138 The concept was proved on analysis of the genomic DNA from PC-3 cells and DNA isolated from melano
140 elanoma and detection in serum of methylated genomic DNA from the AGTR1 CpG island in metastatic mela
145 t AID is transiently in spatial contact with genomic DNA from the time the nuclear membrane breaks do
146 by deep whole-genome bisulfite sequencing of genomic DNA from tissues representing the three germ lay
148 er used 16S rRNA gene amplicon sequencing of genomic DNA (gDNA) and complementary DNA (cDNA) and meta
149 frequency of insertions was compared between genomic DNA (gDNA) collected from cells in the biofilm a
150 uNPs), we have developed a novel unamplified genomic DNA (gDNA) nanosensor, exploiting dispersion and
155 evel (MGMT promoter region) in just 10 ng of genomic DNA (gDNA, ~2700 genomes) extracted from cancer
156 is cut and recombined within a single cell's genomic DNA, generally independent of DNA replication an
157 cloned from Cellulophaga algicola DSM 14237 genomic DNA, heterologously expressed, and characterized
158 Papa-B exon 2 and 3 were determined from the genomic DNA in 255 fecal samples, minimally representing
161 The presence of billions of base pairs of genomic DNA in all nucleated cells raises the question o
162 lian CD59 genes to identify the only span of genomic DNA in C. porcellus that is homologous to a port
169 ortantly, despite high copy number of vector genomic DNA in transplanted heart tissue, there was no e
172 The assay requires just picogram levels of genomic DNA input, is sensitive and specific enough to d
176 We confirmed that RAG1/2 also mobilizes genomic DNA into independent physiological breaks by ide
182 ting) must occur before integration of viral genomic DNA into the host chromosomes, yet remarkably, t
183 virus terminase complex cleaves concatemeric genomic DNA into unit lengths during genome packaging an
186 enrichment of high-quality mtDNA from total genomic DNA is critical to obtain entire mtDNA sequences
198 rough a vast excess of competing, unmodified genomic DNA, is a mechanistic challenge that may limit t
199 osome inactivation ratios were determined in genomic DNA isolated from blood (n = 42) and saliva (n =
200 We performed bisulfite sequencing PCR of genomic DNA isolated from HBV-related HCCs and HBV repli
201 marks 5-methyl-dC and 5-hydroxymethyl-dC in genomic DNA isolated from lungs of A/J mice exposed whol
202 lation with average CAG repeat length at the genomic DNA level determined by PCR method in striatal t
203 alable single-step approach performed at the genomic DNA level in solution that combines with most do
206 Our results suggest coincidence of massive genomic DNA losses and increased power of genetic drift,
207 ous generation of interstrand cross-links in genomic DNA may contribute to aging, neurodegeneration,
209 which genetics, sex, and pregnancy influence genomic DNA methylation by intercrossing 2 inbred mouse
211 del is sensitive enough to detect changes in genomic DNA methylation levels as a function of growth p
213 tic syndromes have been shown to have unique genomic DNA methylation patterns (called "episignatures"
217 emonstrate in this study that IL-26 binds to genomic DNA, mitochondrial DNA, and neutrophil extracell
219 ect MSV in as little as 10 fg/ul of purified genomic DNA obtained from a MSV-infected maize plant, a
221 , we performed whole exome sequencing on the genomic DNA of 13 transgender males and 17 transgender f
223 formation of O(4)-POBdT in naked DNA and in genomic DNA of cultured mammalian cells exposed with NNK
224 in archaeal tRNAs, was recently detected in genomic DNA of Enterobacteria phage 9g and was proposed
225 Deep sequencing of amplicon libraries from genomic DNA of gene-edited parasites revealed Cas9-catal
226 ymethylcytosine, and 5-formylcytosine in the genomic DNA of human CMSCs isolated from diabetic donors
227 o quantitatively detect a 563 bp fragment of genomic DNA of Mycobacterium avium subspecies paratuberc
229 strated by the simultaneous detection of the genomic DNAs of three microorganisms: E. coli, B. cereus
230 es encoding candidate acid phosphatases from genomic DNA or recovered from metagenomic libraries or g
231 provirus gene-editing were confirmed by cell genomic DNA PCR and fluorescent marker expression analys
233 ruct a Dub-seq library with Escherichia coli genomic DNA, performed 155 genome-wide fitness assays in
234 The association of nucleosomes with most genomic DNA prevents initiation from cryptic promoters.
235 psis is a primary mechanism that accelerates genomic DNA rearrangement and amplification into ecDNA a
236 DNA sequences, linear or circular DNA, bulk genomic DNA, recombinant or native Drosophila core histo
238 s ribonucleoside monophosphates (rNMPs) from genomic DNA, replacing the error with the appropriate de
240 a human FXN-GAA-Luciferase repeat expansion genomic DNA reporter model of FRDA, we screened the Stru
242 f rs9315202 in a human kidney cell line HK-2 genomic DNA resulted in a change in KL transcriptional a
243 sufficiently abundant to completely wrap all genomic DNA, resulting in a consistent protein barrier t
244 equence specifically designed not to bind to genomic DNA, resulting in a duplex flanked by single str
245 ed to three different gRNAs targeting HEK293 genomic DNA, resulting in a set of 55 high-confidence gR
246 alysis of mutated target sequences and human genomic DNA reveal that Cascade recognizes an extended p
247 he high-throughput purification of plasmids, genomic DNA, RNA and total nucleic acid (TNA) from a ran
249 response enhancement for direct detection of genomic DNA samples at the level of interest without pre
253 inder model without fitting parameters, with genomic DNA sequence being the only input, we further va
255 PCR method in diagnostics, we amplify human genomic DNA sequences from a approximately 1 muL droplet
257 eterozygous mutation at codon 526 (L526S) in genomic DNA sequencing but a homozygous L526S mutation i
259 ies with inherited hearing loss, panel-based genomic DNA sequencing, followed by segregation analysis
261 iments using this method to sequence E. coli genomic DNA showed that the TGIRT enzyme has surprisingl
262 ant nucleoid-associated proteins at numerous genomic DNA sites and stabilization of distinct long-ran
263 he LAMP assay were evaluated using bacterial genomic DNA-spiked cerebrospinal fluid (CSF) and blood s
264 tant TDP-43, which correlated with increased genomic DNA strand breaks, activation of the DNA damage
265 DNA replication requires that the duplex genomic DNA strands be separated; a function that is imp
268 scriptional factories with replicating viral genomic DNA suggests that KSHV assembles an "all-in-one"
270 ght induce the formation of photoproducts in genomic DNA that are potentially mutagenic and detriment
272 Abasic (Ap) sites are common lesions in genomic DNA that readily undergo spontaneous and amine-c
273 ine dimers (the major UV-induced lesions) in genomic DNA; the quantum yield of these dimers in TEL21/
274 emoves mis-incorporated ribonucleotides from genomic DNA through ribonucleotide excision repair.
276 and single molecule real-time sequencing on genomic DNA to determine these target sequences and thei
280 te whole-genome amplification of single-cell genomic DNA using linear nucleic acid amplification.
282 horylation state in complete (containing the genomic DNA) versus empty (genome-free) HBV virions.
283 ues were collected 14 months after delivery; genomic DNA was analyzed by PCR to detect the Dnajb1-Prk
292 y measuring nuclear bomb test-derived 14C in genomic DNA, we determined the turnover rates of CD4+ an
293 for the coiling and contraction in length of genomic DNA, we suggest that it serves primarily in the
298 allows stable labeling and monitoring of HIV genomic DNA within infected cells during cytoplasmic tra
299 gans cuticle makes it challenging to extract genomic DNA without harsh procedures that can artifactua
300 action and analysis of non-amplified soybean genomic DNA without sample treatment was developed and v