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1 he 180-base pair DNA fragment comprising the homeobox.
2 m includes the activation of aristaless-like homeobox 1 (alx1), a conserved transcriptional regulator
4 n of the transcription factor genomic screen homeobox 1 (gsx1) produced profound defects in PPI in ze
6 P1; from mesoderm to cardiac mesoderm), meis homeobox 1 (MEIS1) and GATA-binding protein 4 (GATA4) (p
7 ear receptor 2f2 (Nr2f2) in addition to Meis homeobox 1 (Meis1) and Meis homeobox 2 (Meis2) gene fami
8 1), paired box 3 (Pax3), Paraxis, mesenchyme homeobox 1 (Meox1), sine oculis-related homeobox 1 (Six1
11 tor 4 alpha (Hnf4a), which competed with NK2 homeobox 1 (Nkx2.1) for binding to forkhead box A2 (Foxa
13 ncreatic and duodenal homeobox 1 (PDX1), NK6 homeobox 1 (NKX6.1), forkhead box A2 (FOXA2), and NK2 ho
16 iverse functions for pancreatic and duodenal homeobox 1 (PDX1), a transcription factor indispensable
17 in sites occupied by pancreatic and duodenal homeobox 1 (PDX1), NK6 homeobox 1 (NKX6.1), forkhead box
20 ression of the transcription factor prospero homeobox 1 (PROX1) was reduced in desmoplastic APC-mutan
23 hyme homeobox 1 (Meox1), sine oculis-related homeobox 1 (Six1), and myogenic factor 5 (Myf5)-in parax
26 d depletion of the zinc finger E-box binding homeobox 1 (ZEB1) in claudin-low tumor cells or forced e
27 related to the mesoderm stage; E-box-binding homeobox 1 (ZEB1) in the module correlated with postcard
28 ased expression of zinc finger E-box binding homeobox 1 (ZEB1) is associated with tumor grade and met
29 c anhydrase IX and zinc finger E-box binding homeobox 1 (Zeb1) protein levels increased in 1% oxygen.
30 ough activation of zinc finger E-box binding homeobox 1 (ZEB1) sensitized tumor cells to the antiprol
31 n (EMT) regulator, Zinc finger E-box binding homeobox 1 (ZEB1), or overexpression of the ZEB1-repress
33 panel (homeobox A1 [HOXA1], empty spiracles homeobox 1 [EMX1], AK055957, endothelin-converting enzym
34 s of function mutations/deletions in the PBX homeobox 1 gene (PBX1), a gene known to have a crucial r
36 sess the effect of zinc finger E box-binding homeobox 1 transcription factor (ZEB1), siRNA-mediated k
38 ind that the ZEB1 (zinc finger E-box binding homeobox 1) transcription factor activity in highly mese
40 box O1 (FOXO1), Paired box 6, SRY box 9, NK6 Homeobox 1, NK6 Homeobox 2] and cell stress markers (DNA
41 eceptor nuclear translocator and sine oculis homeobox 1-and found that their distributions were simil
42 treatment and in fibrotic lungs of prospero homeobox 1-enhanced green fluorescent protein (Prox1-EGF
45 ve tumor suppressor roles in T-cell leukemia homeobox 1/3-transformed human T-ALL cell lines and NOTC
47 transcriptional activity, including cut-like homeobox 2 (a protein coded by CUX2), Glu504Lys of aceta
48 array screening reveals that caudal-related homeobox 2 (Cdx2) and Rbl2/p130 are remarkably suppresse
51 n mice to investigate the role of the TF LIM homeobox 2 (Lhx2) in this process and report that in con
52 generated iPS cell lines overexpressing LIM homeobox 2 (LHX2), which suppresses myofibroblastic chan
53 addition to Meis homeobox 1 (Meis1) and Meis homeobox 2 (Meis2) gene family members were identified b
54 1 (NKX6.1), forkhead box A2 (FOXA2), and NK2 homeobox 2 (NKX2.2) - factors that co-occupy active enha
55 ectives on how the transcription factors NK2 homeobox 2 (NKX2.2), paired box 6 (PAX6), and LIM domain
56 lopmental transcription factor orthodenticle homeobox 2 (Otx2) as an upstream mediator of these endur
57 many of these genes, including orthodenticle homeobox 2 (OTX2), can present with a broad range of cli
58 expression of the homeobox TF, orthodenticle homeobox 2 (Otx2), is regulated in a cell type- and stag
59 ed with a similar reduction in orthodenticle homeobox 2 (Otx2), which is restricted to VTA neurons at
60 xogenous (eGFP) or endogenous [orthodenticle homeobox 2 (Otx2)] genes can be efficiently targeted to
62 wo novel candidate driver genes, POU class 4 homeobox 2 (POU4F2) (mutated in 9 [8.9%] samples) and ZK
63 ional null mutation (R200Q) in visual system homeobox 2 (VSX2), a transcription factor involved in ea
64 we identify the TF zinc finger E box-binding homeobox 2 (Zeb2) to play a crucial role in regulating D
66 e demonstrate that zinc-finger E-box-binding homeobox 2 (Zeb2, also called Sip1) transcription factor
70 ne morphogenic protein 2, and muscle segment homeobox 2, the production of osteocalcin, and the forma
71 Paired box 6, SRY box 9, NK6 Homeobox 1, NK6 Homeobox 2] and cell stress markers (DNA damage inducibl
72 previously identified Zhx2 (zinc fingers and homeoboxes 2) as a regulator of numerous liver-enriched
73 d to the current hypothesis that Caudal-type homeobox-2 (Cdx2) cells in placenta may represent a nove
74 PA-induced dyskinetic movements in pituitary homeobox 3 (Pitx3)-deficient mice that lack of ALDH1A1-e
76 homeodomain transcription factor distal-less homeobox 3 gene (DLX3) is required for hair, tooth and s
77 ound that tfap2a acts downstream of Iroquois homeobox 3b (irx3b), a distal lineage transcription fact
78 zed by the aberrant expression of the Double homeobox 4 (DUX4) transcription factor leading to altere
79 pancy and transcriptional activity of double homeobox 4 (DUX4), a protein whose aberrant expression h
82 ity and cooperation with sine oculis-related homeobox 4 (Six4) and TEA domain family member 2 (Tead2)
84 pecific transcription factor DUX4-fl (double homeobox 4, full-length isoform) linked to the chromosom
85 ciated with higher expression of distal-less homeobox 5 (DLX5) ([Formula: see text]), and lower expre
86 ermore, the homeodomain proteins distal-less homeobox 5 (DLX5) and DLX6 reciprocally inhibit BMP/H2-m
87 ed CHD by repressing Isl1 and activating NK2 homeobox 5 (Nkx2.5), resulting in decreased cell prolife
90 eam SHR regulators SEUSS and WUSCHEL-RELATED HOMEOBOX 5 and to experimentally validate their roles in
92 (PV)-expressing GPe neurons over that of Lim homeobox 6 (Lhx6)-expressing GPe neurons, restores movem
93 associated with hepatocyte nuclear factor 1 homeobox A (Hnf1a) and hepatocyte nuclear factor 4A (Hnf
95 also report that EtOH-mediated increases in homeobox A1 (Hoxa1) and cytochrome P450 family 26 subfam
98 nonhematopoietic BMDCs to pregnancy, we used Homeobox a11 (Hoxa11)-deficient mice, having endometrial
100 entified both common gene targets, including homeobox A5 (HOXA5), which could account for some of the
104 ther through the expression of KNOTTED1-LIKE HOMEOBOX and other indeterminacy genes, altering known d
105 is significant co-occupancy of Nanog (Nanog homeobox) and Hoxa1 on many common target sites, and the
107 Previously we showed that aristaless-related homeobox (ARX), a paired-like transcription factor, regu
108 n polycystic kidney disease 1 (PKD1) or HNF1 homeobox B (HNF1B), inherited from the unaffected parent
110 screening, identification of a single gene, homeobox B5 (Hoxb5, also known as Hox-2.1), with express
112 Here, we show that the mouse Caudal-related homeobox (Cdx) proteins (mCdx1, mCdx2, and mCdx4) are al
113 t Hox and the first loose ecdysozoan ParaHox homeobox clusters are identified, and a myriapod-specifi
118 tingly, aristaless-related homeobox (ARX), a homeobox-containing transcription factor critical for th
125 analysis also revealed roles for zinc-finger homeobox domain and SOX2-interacting genes in OFC etiolo
126 caused impaired structural stability of the homeobox domain and weaker interaction with DNA accordin
129 t affected a highly conserved residue of the homeobox domain, was consistently predicted as pathogeni
135 d, we have established a library of relevant homeobox family inhibitors and developed a high-throughp
136 gene, encoding for the teashirt zinc-finger homeobox family member 3 (TSHZ3) transcription factor th
137 e WUS-box, which is conserved in WUS-related HOMEOBOX family members, and the ethylene-responsive ele
138 ver 15 000 LA-specific enhancers, defined by homeobox family motifs, and annotated several cardiovasc
140 Transcription factors in the TALE-class homeobox family, GSM1 and GSP1, predominantly control ge
141 transcription factors, such as newborn ovary homeobox gene (NOBOX), are candidate genes for primary o
142 divergence created the growth-repressing RCO homeobox gene and facilitated evolution of dissected cru
148 lication, including upregulation of proximal homeobox gene expression and silencing of distal-associa
149 encephalon, members of the distal-less (Dlx) homeobox gene family are expressed in, and regulate the
150 lustered HOX genes, the role of nonclustered homeobox gene family members in hematopoiesis and leukem
151 Meis1, which belongs to TALE-type class of homeobox gene family, appeared as one of the key regulat
152 e found that the hematopoietically expressed homeobox gene Hhex is overexpressed in acute myeloid leu
157 that evolution of an enhancer element in the homeobox gene REDUCED COMPLEXITY (RCO) altered leaf shap
158 ed the lineage of selected Emx2+ [vertebrate homeobox gene related to Drosophila empty spiracles (ems
163 of DLX4, a transcription factor encoded by a homeobox gene, is associated with reduced survival of ov
164 t SHOOT MERISTEMLESS, a class I KNOTTED-LIKE HOMEOBOX gene, is likely to play a role in PLB regenerat
165 re, we report the identification of a poplar homeobox gene, PuHox52, which was induced rapidly (withi
168 buting to activation of ARABIDOPSIS THALIANA HOMEOBOX GENE1, which is needed for boundary establishme
169 d transcription factors, including dozens of homeobox genes and other genes implicated in cancer.
170 nvolved in intestinal development, including homeobox genes and targets of the Polycomb repressive co
171 TMERISTEMLESS (STM) and BREVIPEDICELLUS (BP) homeobox genes and their ability to modify leaf form.
172 architecture and phylogenetic analyses grape homeobox genes can be classified into eleven subfamilies
175 found that conditional knockout of the mouse homeobox genes En1 and En2 in the excitatory cerebellar
176 We hypothesized that Dlx1, Dlx2 and Brn3b homeobox genes function in parallel intrinsic pathways t
179 erize the expression patterns of a set of 49 homeobox genes in the MOE with in situ hybridization.
181 ity results from the distinct effects of two homeobox genes on these growth modes: SHOOTMERISTEMLESS
182 aneously with GATA4 (GATA-binding protein 4) homeobox genes PBX1 (pre-B-cell leukemia transcription f
186 The tissue-specific expression patterns of homeobox genes suggested roles in both vegetative and re
189 ificant changes in the expression of several homeobox genes, as well as other transcription factors,
190 alyse the chromosomal organization of the NK homeobox genes, presumed to be part of a single cluster
191 and sequence analyses of their Hox and other homeobox genes, which encode crucial transcription facto
194 e we uncover unique RNA regulons embedded in homeobox (Hox) 5' untranslated regions (UTRs) that confe
195 ome binding to a regulatory element within a Homeobox (Hox) 5' UTR, we identify a modular stem-loop w
198 etermination of defined roles for endogenous homeobox (Hox) genes in adult hematopoietic stem and pro
199 tosis of AML cells through inhibition of the homeobox (HOX)A9 oncogene expression, reducing the trans
201 hich ectopic expression of the KNOTTED1-like Homeobox (KNOX) gene, BKn3, causes inverted polarity of
202 phology of RNAi lines resemble KNOTTED1-LIKE HOMEOBOX (KNOX) mutants, consistent with a mechanistic c
205 kpoint (MEC)-3 (LIM)-homeobox subfamily, LIM homeobox (Lhx)6 and -8 are remarkably conserved and invo
206 It consists of two MT-A70 proteins and two homeobox-like DNA-binding proteins and specifically meth
207 e present study, we identified a total of 73 homeobox-like genes in the grapevine genome and analyzed
208 by leveraging methylated CpG sites in a LIM homeobox member gene (LHX9), which may have a role in th
211 the dorsal patterning factor, Muscle segment homeobox (Msh; ortholog of MSX1/2/3) binds directly to t
213 xpression of regenerative genes, such as Msh homeobox (Msx) genes, are absent in this animal group.
214 of the embryonic transcription factor Nanog homeobox (NANOG) restored COL3 expression by restoring t
218 these cellular factors, including POU class homeobox (POU) proteins, have known Notch or herpesvirus
219 related orphan receptor beta, brain-specific homeobox/POU domain protein 3b, Ets variant gene 1, subs
220 eodomain protein/hematopoietically expressed homeobox (PRH/HHEX) transcription factor forms a positiv
221 ked by the activity-dependent neuroprotector homeobox Protein (ADNP) and located near cell-cycle gene
222 ral retina leucine zipper (NRL) and cone-rod homeobox protein (CRX), two rod-specific differentiation
223 or and human diabetes gene pancreas/duodenum homeobox protein 1 (Pdx1) regulates beta-cell survival a
224 levels of the transcription factor prospero homeobox protein 1 (PROX1), which relieved repression of
225 type, expressing lymphatic markers (prospero homeobox protein 1 and vascular endothelial growth facto
228 onan receptor 1]: p < 0.05; PROX-1 [prospero homeobox protein 1]: p < 0.001) compared with control su
229 cription factor 3), and Shox2 (short-stature homeobox protein 2), have been identified, the cis-regul
230 r observed that MSEW increased orthodenticle homeobox protein 2, a transcription factor promoting PNN
231 n-positive interneurons, PNNs, orthodenticle homeobox protein 2, and MSEW-induced anxiety and hyperac
232 cine zipper protein (HD-ZIP)-encoding genes: HOMEOBOX PROTEIN 21 (HB21), HOMEOBOX PROTEIN 40 (HB40),
233 xpression of the transcription factor double homeobox protein 4 (DUX4) can lead to a number of diseas
234 -encoding genes: HOMEOBOX PROTEIN 21 (HB21), HOMEOBOX PROTEIN 40 (HB40), and HOMEOBOX PROTEIN 53 (HB5
236 cgn), specificity protein 8 (SP8) and/or LIM homeobox protein 7 (Lhx7) separates striatal CR+ interne
239 e identified the hematopoietically expressed homeobox protein Hhex as a transcription factor regulati
242 of KRAS-mutant NSCLCs aberrantly express the homeobox protein HOXC10, largely due to unappreciated de
244 We report here that the intestine-specific homeobox protein ISX is critical to control the metaboli
246 rentiation from a primitive and pluripotent (homeobox protein Nanog+/ sex-determining region Y-box 9+
248 tative NKE elements, possible targets of NK2 homeobox proteins like the essential islet transcription
253 sl)-1/mitosis entry checkpoint (MEC)-3 (LIM)-homeobox subfamily, LIM homeobox (Lhx)6 and -8 are remar
254 ures are the first example of human MADS-box/homeobox ternary complex structures involved in cardioge
257 creatic transcription factor 1a (Ptf1a), the homeobox TF-Lbx1 and the Lim-homeodomain (Lim-HD), and T
260 activation and/or maintenance of LMX1A (LIM homeobox transcription factor 1alpha) and PITX3 (paired-
261 profiling, we identify the Engrailed-1 (EN1) homeobox transcription factor as a key BRD4-S coregulato
265 d signals, directly activates the LIM domain homeobox transcription factor Lhx1 in the visceral endod
266 Hcrt neurons in vivo, we identified the LIM homeobox transcription factor Lhx9 as necessary and suff
267 ncer, resulting in altered expression of the homeobox transcription factor PDX1 and its target genes
271 licated in senescence, we identified DLX2, a homeobox transcription factor that has been shown to be
276 an specifically synergize with the oncogenic homeobox transcription factor TLX3 to cause lymphoid neo
277 mportantly, we identify Lhx2 (encoding a LIM/homeobox transcription factor) as a direct NF-kappaB tar
279 expression of the Zinc finger E-box binding homeobox transcription factor-2 (ZEB2) is correlated wit
282 of spontaneous resistance, we identify bHLH/homeobox transcription factors and cell-cycle regulators
283 The 40-CpG melanoma classifier included homeobox transcription factors and genes with roles in s
285 polycomb target genes at low levels and that homeobox transcription factors are upregulated when this
289 opment in grape revealed that genes encoding homeobox transcription factors were differentially regul
292 al and abaxial domains and maintained by WOX homeobox transcription factors, whereas other marginal e
293 in the GSX2 gene, a member of the family of homeobox transcription factors, which are key regulators
296 how that SIX1, a member of the SIX family of homeobox transcriptional factors, is a novel repressor o
297 a identified ectopic increased expression of homeobox-type transcription factors (Hoxa5, Hoxa4, Hoxb5
298 t that WOX7, a member of the WUSCHEL related homeobox (WOX) family transcription factors, inhibits la
299 ample of this is seen in the WUSCHEL-RELATED HOMEOBOX (WOX) gene family, named after the Arabidopsis