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1 i (where X is any amino acid and varphi is a hydrophobic amino acid).
2 re hydrolysis occurs between proline and the hydrophobic amino acid.
3 -C-L/M-A-G-X-Psi-C, where Psi represents any hydrophobic amino acid.
4 tides starting with methionine followed by a hydrophobic amino acid.
5 germination machinery also recognizes other hydrophobic amino acids.
6 minus, showing a strong preference for large hydrophobic amino acids.
7 ) reading frames (RFs) that are enriched for hydrophobic amino acids.
8 ep pocket that includes both hydrophilic and hydrophobic amino acids.
9 ficantly more hydrophilic than Phe and other hydrophobic amino acids.
10 ural change upon binding Ca(2+) that exposes hydrophobic amino acids.
11 g the arginines, interacts with a cluster of hydrophobic amino acids.
12 interface is tightly packed and dominated by hydrophobic amino acids.
13 ein were replaced with random, predominantly hydrophobic amino acids.
14 -strands, wrapped around a core of conserved hydrophobic amino acids.
15 nd a loop that show an unusual clustering of hydrophobic amino acids.
16 segments with corresponding lengths of other hydrophobic amino acids.
17 with a high affinity for Lys, Arg and large hydrophobic amino acids.
18 t tyrosine-based motif followed by a pair of hydrophobic amino acids.
19 an der Waals' interaction with beta-branched hydrophobic amino acids.
20 abilization of the [4Fe-4S] cluster by bulky hydrophobic amino acids.
21 o acid preferring (BrAAP) cleave bonds after hydrophobic amino acids.
22 synthesis rather than cysteines, serines or hydrophobic amino acids.
23 emainder of the pore is wider and lined with hydrophobic amino acids.
24 elatin at the film surface and crosslink the hydrophobic amino acids.
25 port signal (NES), a leucine-rich stretch of hydrophobic amino acids.
26 nds directly C-terminal to basic, polar, and hydrophobic amino acids.
27 341 and Leu344 in the alpha-helix with other hydrophobic amino acids.
28 ducing a 5-fold decrease in k(cat)/Km toward hydrophobic amino acids.
29 r aromatic residues, but not by non-aromatic hydrophobic amino acids.
30 between the long-chain hydrocarbons and the hydrophobic amino acids.
31 aled that cocoa autolysates were abundant in hydrophobic amino acids.
34 These key residues include Gln67, a small hydrophobic amino acid (Ala or Val) at the 57th position
35 charged aspartic and glutamic acids, and the hydrophobic amino acid alanine all destabilize mtDNA in
38 T of Bacillus halodurans is a transporter of hydrophobic amino acids and a homologue of the eukaryoti
40 model indicates a clear preference for bulky hydrophobic amino acids and for sulphur-containing amino
41 ionic carboxy-terminus residues that replace hydrophobic amino acids and have enhanced MHC binding, r
44 c amino acids, with the highest affinity for hydrophobic amino acids and the lowest affinity for prol
46 motifs, YXXPhi (where Phi represents a bulky hydrophobic amino acid) and LL, that are important for b
47 es, which share an HbYX motif (where Hb is a hydrophobic amino acid) and open substrate access gates
48 ation of the gatekeeper residue (a conserved hydrophobic amino acid) and the use of a bulky inhibitor
49 contains evolutionarily conserved polar and hydrophobic amino acids, and mutations that change these
50 vinegar (BV) contains abundant essential and hydrophobic amino acids, and polyphenolic contents, espe
51 sport, 25 sites were individually mutated to hydrophobic amino acids, and the effect on proton transp
52 peat Sera Xxx Xxx Leud Xxx Xxx Xxx (Xxx is a hydrophobic amino acid) appears in both antiparallel hel
53 rboxyl terminus of UL20p, since aromatic and hydrophobic amino acids are known to be involved in prot
54 ltaDeltaG(0)w,i(pi)) residues and found that hydrophobic amino acids are most favorably transferred t
55 fluorescent protein (GFP) to the PM, and the hydrophobic amino acids are necessary for PM targeting o
56 ms that functionally important transmembrane hydrophobic amino acids are specified by codons containi
57 ated to the sequence HphiHphiHphiphi (phi, a hydrophobic amino acid), are a superfamily of nucleotide
59 To understand the influence of different hydrophobic amino acids at "a" and "d" positions of a he
60 ipeptide aldehydes were those that possessed hydrophobic amino acids at both the P1 and P2 positions.
62 preferentially phosphorylated peptides with hydrophobic amino acids at position +1 carboxyl-terminal
63 histidine at 201 while other species contain hydrophobic amino acids at position 201 in the otherwise
64 ell as the integrity of the highly conserved hydrophobic amino acids at positions 313-316, is essenti
65 with a pI of 5.5 that possesses 22 primarily hydrophobic amino acids at residues 3 to 25, predicting
69 Our results demonstrate the importance of hydrophobic amino acids at the AT1R transmembrane interf
72 and Val-scanning mutagenesis determined that hydrophobic amino acids at three homologous positions ar
73 in the presence of small amounts of racemic hydrophobic amino acid auxiliaries, which are known to b
74 utational analysis identified a stretch of 5 hydrophobic amino acids, AVAAV (amino acids 222-226), cr
75 ch is defined by a characteristic pattern of hydrophobic amino acids, basic and aromatic amino acids,
76 hypertriglyceridemia, two sets of conserved, hydrophobic amino acids between residues 261 and 283 wer
77 n analysis, and site-directed mutagenesis of hydrophobic amino acids between residues 290 and 311 all
78 vitro through a short sequence of basic and hydrophobic amino acids, BH site, based on the charge de
79 have polar amino acids on their surfaces and hydrophobic amino acids buried in their cores, protein e
80 s might therefore contain not only accepted "hydrophobic" amino acids, but also larger charged side c
81 P132G, P132W, P132F) revealed that no other hydrophobic amino acid can preserve the monomeric state
82 s of this study illustrate that conservative hydrophobic amino acid changes near the heme binding sit
84 ,K-ATPase shows the presence of a relatively hydrophobic amino acid cluster proximal to N-glycosylati
85 by revealing the occurrence of drying inside hydrophobic amino acid clusters and its manifestation in
86 small number were not cysteine-rich but had hydrophobic amino acid clusters interspersed with argini
87 y the preferential incorporation of the more hydrophobic amino-acid component with increased rate and
88 conserved tip of Wnt's "index finger" forms hydrophobic amino acid contacts with a depression on the
89 g of the scaffolding region of caveolin to a hydrophobic amino acid-containing region within the regu
90 The cytoplasmic pore is lined by acidic and hydrophobic amino acids, creating a favorable environmen
93 eplacements of Ala and Gly with Arg or bulky hydrophobic amino acids displayed increased potency and
94 ed amino acid sequence, the protein contains hydrophobic amino acid domains at its N- and C-terminus
96 he substitutions of residue 481 with various hydrophobic amino acids elicited a profound alteration o
99 produced by substituting a varying number of hydrophobic amino acids for alanine on either one or bot
100 ns that substituted either smaller or larger hydrophobic amino acids for Val370, within the P2X2(a) s
104 ar residues except for a patch of relatively hydrophobic amino acids found in the carboxyl-terminal 1
105 rface recognition BHHB motif (B = basic, H = hydrophobic amino acid) found in protegrins and tachyple
106 k is composed of alternating hydrophilic and hydrophobic amino acids (glutamine and leucine, respecti
107 Two distinct activities cleaving bonds after hydrophobic amino acids have been identified in the bovi
108 room temperature, small organic solutes and hydrophobic amino acids have low solubilities in water a
109 isotropic model trend lines whereas those of hydrophobic amino acids (Ile, Phe) deviate positively fr
111 dependent receptor demonstrated that a large hydrophobic amino acid in this position promotes recogni
113 3 amino acids, limits positively charged and hydrophobic amino acids in CDR3beta, and clonally delete
114 membrane (TM) domains to explore the role of hydrophobic amino acids in mediating specific interactio
116 d in their structures sterically constrained hydrophobic amino acids in positions 6 (His) and 8 (Arg)
117 dreds of thousands of proteins consisting of hydrophobic amino acids in random order to isolate four
118 ctivities indicated that several charged and hydrophobic amino acids in ring B of bovicin HJ50, as we
120 g the overall ratio of positively charged to hydrophobic amino acids in surfactant protein B (SP-B),
121 interfacial region and prevents some of the hydrophobic amino acids in the alpha-helix from reaching
122 mutants and the solvent accessibility of the hydrophobic amino acids in the apo state, Ca(2+) bound s
123 localization was dependent on a sequence of hydrophobic amino acids in the extracellular domain of N
129 milarly, mutations disrupting four conserved hydrophobic amino acids in the p53 C-terminal NES block
130 trating individual substitutions of critical hydrophobic amino acids in the peptide resulted in the l
131 ndent binding sites containing two conserved hydrophobic amino acids in the S3b transmembrane segment
134 ared in a parallel series with all six bulky hydrophobic amino acids in their sequences replaced with
135 Similarly, hydrophilic substitution of two hydrophobic amino acids in this cluster disrupts both be
136 nstead hydrophobic in nature, five conserved hydrophobic amino acids in this region were also mutated
139 tein surface and interact predominately with hydrophobic amino acids, in particular aromatic residues
140 at positions H24 in [I(6)F(13)H(24)](2) with hydrophobic amino acids incompetent for heme ligation.
142 ds mostly interact with B-nucleotides, while hydrophobic amino acids interact extensively with A-nucl
143 rotein (Env) contains a stretch of conserved hydrophobic amino acids internal to its amino terminus (
144 ively fluorinated, or fluorous, analogues of hydrophobic amino acids into proteins potentially provid
145 Initially, we found that both basic and hydrophobic amino acids, irrespective of sequence, contr
146 eplacement of breakpoint serine with a bulky hydrophobic amino acid is sufficient to completely flip
148 t, low-sensitivity receptor specific for the hydrophobic amino acids isoleucine, leucine, and valine.
150 sidues were not critical or essential, three hydrophobic amino acids (L465, L476, and L480) played an
151 we identified a single stretch of conserved hydrophobic amino acids (LAM/LALRL/V (ScMcb1 228-234 and
152 A minimal tripeptide motif containing three hydrophobic amino acids (Leu, Val, and Ile) or any two p
155 analyses suggest that the critical polar and hydrophobic amino acids localize on opposite sides of th
156 alysis also identified essential charged and hydrophobic amino acids located between two of the essen
157 diated by an annular determinant composed of hydrophobic amino acids located near the cytoplasmic end
159 der Waals contacts with a group of conserved hydrophobic amino acids located on the rim of the C1 dom
160 drophobic contacts with a group of conserved hydrophobic amino acids located on the top half of the C
161 oplets are most likely domains of moderately hydrophobic amino acids located within the central 25% o
162 -based motif, YTKPhi (where Phi is any bulky hydrophobic amino acid), located between the second and
163 We tested this hypothesis by identifying two hydrophobic amino acids, M195 and F259, in the catalytic
164 pressure effects on the interaction between hydrophobic amino acids may be considerably amplified co
165 y active-site residues in enzymes, including hydrophobic amino acids, may contribute to catalysis thr
166 sylation by tryptophan 204 suggests that the hydrophobic amino acid mimics an ADP-ribosylated arginin
167 age is dependent upon the presence of paired hydrophobic amino acids; moreover, cleavage was found to
169 first series, which retained the charge and hydrophobic amino acids of tachyplesin, but contained ze
170 is of integral membrane proteins (IMPs), the hydrophobic amino acids of the polypeptide sequence are
171 desolvation led to the exposure of embedded hydrophobic amino acids of WPI to riboflavin, facilitati
172 e hemifusion mutant that terminates with 15 (hydrophobic) amino acids of the HA TM domain, restored f
173 tinolytic activity, substrate preference for hydrophobic amino acids on both sides of the scissile bo
174 rk that linearizes the helix and exposes the hydrophobic amino acids on the opposite face of the heli
175 he isostere of lopinavir in combination with hydrophobic amino acids on the opposite P2/P2' position.
177 odification of agPNA-peptide conjugates with hydrophobic amino acids or small molecule hydrophobic mo
178 ctures unless their sequences comprised more hydrophobic amino acids or until coordinating phosphate
182 We prepared mutants in which the C2 domain hydrophobic amino acid pairs were changed to the homolog
184 s of the genus Fusarium, is composed of four hydrophobic amino acids (Phe, two Leu, Val) and one hydr
186 function because mutation of L343 to another hydrophobic amino acid, phenylalanine, in the beta2 AChR
188 Biofilm formation was affected mostly by hydrophobic amino acid positions, suggesting that the ca
190 membrane domain (TM) V and several primarily hydrophobic amino acids present within the cytoplasmic p
192 R6Y containing additional cationic and bulky hydrophobic amino acids proved the best mimics of the am
194 d spikes 1 and 3, display four water-exposed hydrophobic amino acids, reminiscent of the membrane-int
195 mutant receptors, particularly those with a hydrophobic amino acid replacement, may not bind CheW/Ch
196 esidues 1-72) that includes a sequence of 20 hydrophobic amino acids required for membrane translocat
197 nstitutive activity, suggesting that a large hydrophobic amino acid residue at position 254 alters tr
198 conserved CxxxC motif (where "x" can be any hydrophobic amino acid residue) in physical interactions
200 Site-directed mutagenesis revealed that hydrophobic amino acid residues centrally located in the
201 lycosylhydrolases, including both acidic and hydrophobic amino acid residues critical for enzyme acti
202 promoters; (ii) assess the role of conserved hydrophobic amino acid residues for MarA activity; and (
206 interactions of Arg120, Tyr355, and several hydrophobic amino acid residues in the COX-2 active site
207 s in mussel plaques), the high proportion of hydrophobic amino acid residues in the flanking sequence
209 roduction of highly fluorinated analogues of hydrophobic amino acid residues into proteins has proved
210 ional analyses revealed that three blocks of hydrophobic amino acid residues located within TAND3 are
211 Ga-Pa-PCNA1 complex is thermostable, and two hydrophobic amino acid residues on Pa-UDGa (Phe(191) and
214 tween helices of a coiled coil are formed by hydrophobic amino acid residues packed in a "knobs-into-
216 te-directed mutagenesis to change charged or hydrophobic amino acid residues to alanines to identify
217 that this leucine may interact with several hydrophobic amino acid residues to influence the spatial
218 or silk proteins is a strong predominance of hydrophobic amino acid residues to provide for the hydro
220 viously suggested role of a stretch of small hydrophobic amino acid residues within the first transme
221 on defects resulted solely from mutations of hydrophobic amino acid residues within the hydrophobic c
222 d a conserved C-terminal primary anchor with hydrophobic amino acid residues, as well as one or more
223 ccurs primarily through aromatic, basic, and hydrophobic amino acid residues, the majority of which a
230 Replacement of this Asn202 with a variety of hydrophobic amino acids results in a protein that is bli
231 een the nucleus and cytoplasm, using typical hydrophobic amino acid-rich nuclear export sequences, an
232 ween authentic signal sequences and the less hydrophobic amino acid segments in cytosolic proteins.
237 rms specific favorable interactions with the hydrophobic amino acid side chain, alpha-carbon, carboxy
238 ns is caused by disruption of the cluster of hydrophobic amino acid side chains and that the midregio
240 ix may function to force solvent exposure of hydrophobic amino acid side chains in the regions flanki
241 d gate in the ion-conducting pore, formed by hydrophobic amino acid side chains, located ~60 angstrom
244 adheres to the outer forespore membrane via hydrophobic, amino acid side-chains on the hydrophobic f
245 e, X is any amino acid, and phi is any bulky hydrophobic amino acid) signal sequence (YSRV) that medi
246 es for PKA and PKC and are rich in basic and hydrophobic amino acids similar to a class of membrane-t
247 t that CaM recognizes a '1-4-7-8' pattern of hydrophobic amino acids starting at Trp79 in AKAP79.
248 known low density lipoprotein receptor, a 24 hydrophobic amino acid stretch spanning the plasma membr
250 e of a catalytic His is also observed in the hydrophobic amino acid-substituted GTPase RbgA and is an
251 show that several phospholamban mutants with hydrophobic amino acid substitutions at the Leu/Ile zipp
255 head composed of aspartic acid and a tail of hydrophobic amino acids such as alanine, valine, or leuc
256 teins incorporating fluorinated analogues of hydrophobic amino acids such as leucine and valine into
257 The alternating pattern of hydrophilic and hydrophobic amino acids suggests the possibility that SB
262 is achieved via a noticeable arrangement of hydrophobic amino acids that are exposed at the surface
264 c sequences of leucines and isoleucines, two hydrophobic amino acids that differ only by the position
265 e identify highly conserved carboxy-terminal hydrophobic amino acids that function as a leptomycin B-
267 istal cavity of DHP is surrounded by several hydrophobic amino acids that stabilize internal binding
268 m di-hydrophobic (TDH) motif, where Phi is a hydrophobic amino acid), the signal shows no resemblance
270 en the (329)RKK(331) residues are mutated to hydrophobic amino acids, these residues form even strong
271 in PHAS-I and the h(S/T)h site (where h is a hydrophobic amino acid) Thr389 in p70(S6K), were phospho
272 c residues), the viral cytokine largely uses hydrophobic amino acids to contact gp130, which enhances
273 sine, ornithine, histidine and arginine, the hydrophobic amino acid tryptophan, and alanine as a spac
274 including branched-chain amino acids, other hydrophobic amino acids, tryptophan breakdown products,
279 itutions of leucine at position 492 with the hydrophobic amino acids valine or phenylalanine also red
281 ensus motif GHFGGXY, where X is preferably a hydrophobic amino acid, was shown previously to inhibit
285 ible hydrophilic residues were replaced with hydrophobic amino acids, were shown to still assemble pr
286 -Tyr-Tyr-X-Tyr cluster, where X represents a hydrophobic amino acid, which terminates with acidic res
287 ading frame use resulting in predominance of hydrophobic amino acids, which are counterselected in co
288 15-LOX-2 contains a long loop, composed of hydrophobic amino acids, which projects from the amino-t
289 G(unfold)) afforded by the substitution of a hydrophobic amino acid with its fluorinated analogue var
290 gh concentration solutions of a prototypical hydrophobic amino acid with its polar backbone, N-acetyl
293 hypothesis, we exchanged the remaining three hydrophobic amino acids with neutral amino acids by site
294 tein, ranging from long-chain fatty acids to hydrophobic amino acids, with EC(50) values from 99 nM f
298 GRK5 and define the importance of a group of hydrophobic amino acids within this motif in mediating i
299 of the p10 sequence and identified the four hydrophobic amino acids within this region that comprise
300 PI31 has a C-terminal HbYX (where Hb is a hydrophobic amino acid, Y is tyrosine, and X is any amin