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1 pylar endosperm) and RAD (radicle plus lower hypocotyl).
2 ross the epidermis below the meristem in the hypocotyl.
3 gerated apical hook, and a thickening of the hypocotyl.
4 along the length of the Arabidopsis thaliana hypocotyl.
5 ed the site of light perception to the upper hypocotyl.
6 tic lesions were observed at the base of the hypocotyl.
7 ous and occurs more prominently in the basal hypocotyl.
8 m, phloem, and primary xylem in the stem and hypocotyl.
9 l controls of cell elongation in Arabidopsis hypocotyl.
10 steeper auxin signaling gradient across the hypocotyl.
11 tion occurs, but it differs between stem and hypocotyl.
12 stinct, permissive temperature sensor in the hypocotyl.
13 cell elongation in different regions of the hypocotyl.
14 h in rapidly elongating roots and dark-grown hypocotyls.
15 genes are defective in stomata formation in hypocotyls.
16 tability are aberrant in etiolated xxt1 xxt2 hypocotyls.
17 that promotes cell elongation in Arabidopsis hypocotyls.
18 veral candidate regulators in the elongating hypocotyls.
19 growth, and, in etiolated seedlings, shorter hypocotyls.
20 issect their trafficking routes in etiolated hypocotyls.
21 growth of Arabidopsis (Arabidopsis thaliana) hypocotyls.
22 resulting in low activity of PIF3 and short hypocotyls.
23 rlapping patterns of expression in etiolated hypocotyls.
24 transcript and late flowering and elongated hypocotyls.
25 psi1-1 seedlings have shorter roots and hypocotyls.
26 in the cotyledon tissue but not meristems or hypocotyls.
27 extent of axial cell expansion in dark-grown hypocotyls.
29 esent evidence that PHOTOPERIODIC CONTROL OF HYPOCOTYL 1 (PCH1) functions both as an essential struct
30 nd that an Arabidopsis LIGHT-DEPENDENT SHORT HYPOCOTYLS 1 and Oryza G1 (ALOG) family protein, named M
36 n of the organ boundary gene LIGHT-SENSITIVE HYPOCOTYL 4 restored RZ function and stem growth in the
37 f5 (pifq) mutants; the dynamics of ELONGATED HYPOCOTYL 5 (HY5) and LONG HYPOCOTYL IN FAR-RED (HFR1) p
38 ion of the transcription activator ELONGATED HYPOCOTYL 5 (HY5) that is associated with chromatins of
41 (IAA) transport and its accumulation in the hypocotyl above the point of excision where adventitious
42 racterized by reduced growth of the root and hypocotyl, an exaggerated apical hook, and a thickening
43 opposite effects on phyB's functions in the hypocotyl and cotyledon despite inducing similar photobo
45 clarify cell-specific auxin function in the hypocotyl and highlight the complexity of cell type inte
46 rnode elongation, a mutant with an elongated hypocotyl and internodes but wild-type petioles was iden
49 med thermomorphogenesis, is characterized by hypocotyl and petiole elongation and hyponastic growth a
50 ght leads to enhanced auxin signaling in the hypocotyl and, upon phototropic stimulation, a steeper a
52 ABP1 on transcriptomic changes in dark-grown hypocotyls and investigated the consequences of gene exp
53 PGX1(AT) plants, PGX2(AT) plants have longer hypocotyls and larger rosette leaves, but they also uniq
55 detected in the epidermal layers of leaves, hypocotyls and roots; in the root, it was predominantly
57 ar interactions in the plant embryonic stem (hypocotyl), and analyzing these using quantitative netwo
58 arly flowering and increased length of root, hypocotyl, and petiole when compared with Col-0 and jaz4
61 tosis to endoreplication was lower in abcb19 hypocotyls, and fluorescence microscopy showed the CCS52
63 al targeting approach therefore excludes the hypocotyl apex as the site for light perception for phot
64 -GFP (P1-GFP) expression was targeted to the hypocotyl apex of the phot-deficient mutant using the pr
65 te in more detail the functional role of the hypocotyl apex, and the regions surrounding it, in estab
66 n of CUC3::P1-GFP was clearly visible at the hypocotyl apex, with weaker expression in the cotyledons
68 ds expression of Bn-FAE1.1 into the axis and hypocotyl but also acts negatively to repress expression
70 t light leads to the transient elongation of hypocotyls by stabilizing the ACS5 protein during the da
71 to far-red shade by the cotyledons triggers hypocotyl cell elongation and auxin target gene expressi
76 his manipulation, a large population of host hypocotyl cells are delayed in cell cycle exit and maint
77 over, we demonstrate that Golgi transport in hypocotyl cells can be accurately predicted from the act
78 in microtubule dynamics in spr1 eb1b mutant hypocotyl cells correlated well with the severity of gro
79 n cytoskeleton in both growing and elongated hypocotyl cells has structural properties facilitating e
84 n mtp8-2 mutant, Mn no longer accumulates in hypocotyl cortex cells and sub-epidermal cells of the em
87 or instance, secondary growth of Arabidopsis hypocotyls creates a radial pattern of highly specialize
90 systemic, related to the disturbance of host hypocotyl developmental programs by preventing cell cycl
93 wth medium greatly enhances the reduction in hypocotyl elongation and cellulose content of shv3svl1 T
94 ole of phyA-dependent CKI1 expression in the hypocotyl elongation and hook development during skotomo
95 me 2 (CRY2) mediate blue light inhibition of hypocotyl elongation and long-day (LD) promotion of flor
96 t receptor that mediates light inhibition of hypocotyl elongation and long-day promotion of floral in
100 emonstrate that the magnitude of Suc-induced hypocotyl elongation depends on the day length and light
101 light/dark cycles, we found that Suc-induced hypocotyl elongation did not occur in tps1 mutants and o
104 thylene, accentuates the effects of light on hypocotyl elongation during the dark-to-light transition
106 iologically, Glc and BR interact to regulate hypocotyl elongation growth of etiolated Arabidopsis (Ar
107 -6 double mutant displayed severe defects in hypocotyl elongation growth similar to its bri1-6 parent
110 at, when overexpressed, resulted in enhanced hypocotyl elongation in etiolated Arabidopsis thaliana s
112 nt with ethylene or auxin inhibitors reduced hypocotyl elongation in PIF4 overexpressor (PIF4ox) and
114 e fluence rate response where suppression of hypocotyl elongation increases incrementally with light
117 s thaliana) seedlings are grown in the dark, hypocotyl elongation is promoted, whereas root growth is
118 elicits shade- and high temperature-induced hypocotyl elongation largely independently of 3-IPA-medi
121 Mutation in DET1 changed the sensitivity of hypocotyl elongation of mutant seedlings to GA and paclo
122 articipates positively in the control of the hypocotyl elongation response to plant proximity, a role
124 ts in fertility, and enhanced sensitivity of hypocotyl elongation to red but not to far-red or blue l
126 ight- and phytochrome-mediated regulation of hypocotyl elongation under red (R) and FR illumination.
129 cient phyA-dependent pathway that suppresses hypocotyl elongation when challenged by shade from nearb
131 reviously uncharacterized LHE (LIGHT-INDUCED HYPOCOTYL ELONGATION) gene, which we show impacts light-
132 ppressed chlorophyll synthesis, promotion of hypocotyl elongation, and formation of a closed apical h
133 active in KAI2-dependent seed germination or hypocotyl elongation, but both were active in AtD14-depe
134 rphogenesis, as illustrated by inhibition of hypocotyl elongation, cotyledon opening, and leaf greeni
135 e overexpressors has differential effects on hypocotyl elongation, leaf shape, and petiole length, as
136 e of these genes in the control of greening, hypocotyl elongation, phyllotaxy, floral organ initiatio
137 g deoxystrigolactones to inhibit Arabidopsis hypocotyl elongation, regulate seedling gene expression,
138 ure in distinct developmental traits such as hypocotyl elongation, root elongation, and flowering tim
139 lthough only SMAX1 regulates germination and hypocotyl elongation, SMAX1 and SMXL6,7,8 have complemen
152 ging of a structure-function relationship in hypocotyl epidermal cell patterning through global topol
153 tation of Arabidopsis (Arabidopsis thaliana) hypocotyl epidermal cells, dynamic cortical microtubules
154 aliana with transcriptional profiling of the hypocotyl epidermis from Brassica rapa, we show that aux
158 comparison, average speed in the A. thaliana hypocotyl expressing GFP-AtCESA6 was 184 +/- 86 nm min(-
161 light responses, including seed germination, hypocotyl gravitropism, and chlorophyll biosynthesis, by
162 the circadian clock, and we review seedling hypocotyl growth as a paradigm of PIFs acting at the int
163 promotes PIF4/PIF5 protein accumulation and hypocotyl growth at both 22 degrees C and 17 degrees C,
164 integrates light and temperature control of hypocotyl growth by promoting PIF4 and PIF5 protein abun
167 Moreover, the stimulatory role of light on hypocotyl growth during the dark-to-light transition pro
168 peratively stimulate a transient increase in hypocotyl growth during the dark-to-light transition via
170 night temperature difference [-DIF]) inhibit hypocotyl growth in Arabidopsis (Arabidopsis thaliana).
172 Ethylene and light antagonistically control hypocotyl growth in either continuous light or darkness.
174 g is required in many cell types for correct hypocotyl growth in shade, with a key role for the epide
175 xpression, coinciding with the initiation of hypocotyl growth in the early evening, is positively cor
177 brief heat shocks enhance the inhibition of hypocotyl growth induced by light perceived by phytochro
180 signaling pathways and uncover differential hypocotyl growth of red light-grown seedlings in respons
181 me and root growth; control of cotyledon and hypocotyl growth requires simultaneous phyA activity in
183 sential for plant cold acclimation, promotes hypocotyl growth under ambient temperatures in Arabidops
184 and the conditional use of GA-ATHB5-mediated hypocotyl growth under optimal conditions may be used to
186 ses of gene expression, cotyledon unfolding, hypocotyl growth, and greening observed in the phyA muta
187 e changes of single hypocotyl protoplasts or hypocotyl growth, both at high temporal resolution.
188 is both necessary and sufficient to initiate hypocotyl growth, but we also provide evidence for the f
189 with the negative regulatory role of HOS1 in hypocotyl growth, HOS1-defective mutants exhibited elong
190 However, how ethylene and light regulate hypocotyl growth, including seedling emergence, during t
191 ast to the known inhibitory role of light in hypocotyl growth, light treatment transiently increases
193 ic diurnal variation in Arabidopsis thaliana hypocotyl growth, we found that cellulose synthesis and
194 ing phenotypes, including increased stem and hypocotyl growth, which increases the likelihood of outg
195 g converge to influence the transcription of hypocotyl growth-promoting SAUR19 subfamily members.
208 UV-B also stabilizes the bHLH protein LONG HYPOCOTYL IN FAR RED (HFR1), which can bind to and inhib
209 date a previously unidentified role for long hypocotyl in far red 1, a negative regulator of the PIFs
210 levels of the transcriptional cofactor LONG HYPOCOTYL IN FAR RED1, which also binds to PIF1 and othe
212 mics of ELONGATED HYPOCOTYL 5 (HY5) and LONG HYPOCOTYL IN FAR-RED (HFR1) proteins; and the epistatic
214 n studies and proposed to interact with LONG HYPOCOTYL IN FAR-RED1 (HFR1), a (b)HLH protein that inhi
215 Arabidopsis (Arabidopsis thaliana) Short Hypocotyl in White Light1 (SHW1) encodes a Ser-Arg-Asp-r
217 are required for an efficient elongation of hypocotyls in response to auxin and for the correct expr
219 of free auxin in specialized organs such as hypocotyls in response to shade and high temperature.
223 similar to its Arabidopsis counterpart (long hypocotyls in white and blue light), but also several ad
225 in transport and that auxin transport in the hypocotyl is a prerequisite for phot1-dependent hypocoty
227 IF- and light-regulated stomata formation in hypocotyls is critically dependent on LLM-domain B-GATA
230 e with Sl-MMPs in the apoplast of the tomato hypocotyl, it exhibited increased stability in transgeni
233 ined, these results show that PIF3 regulates hypocotyl length downstream, whereas PIF4 and PIF5 regul
234 ntrast to pif4 and pif5 mutants, the reduced hypocotyl length in pif3 cannot be rescued by either ACC
235 d seed weight and internode length, enhanced hypocotyl length in red light, inhibited primary root gr
236 delineate Arabidopsis (Arabidopsis thaliana) hypocotyl length kinetics in response to ethylene and sh
237 h downstream, whereas PIF4 and PIF5 regulate hypocotyl length upstream of an auxin and ethylene casca
238 th AtHY5, which does not cause any change in hypocotyl length when overexpressed in Arabidopsis, the
239 BBX19 expression by RNA interference reduces hypocotyl length, and its constitutive expression promot
243 of the core clock regulators LATE ELONGATED HYPOCOTYL (LHY) and CIRCADIAN CLOCK ASSOCIATED1 (CCA1) i
244 sic mutant alleles accumulate LATE ELONGATED HYPOCOTYL (LHY) and CIRCADIAN CLOCK ASSOCIATED1 (CCA1) s
245 DIAN CLOCK ASSOCIATED1 (CCA1)/LATE ELONGATED HYPOCOTYL (LHY) and the evening gene TIMING OF CAB EXPRE
247 rcadian clock gene P. hybrida LATE ELONGATED HYPOCOTYL (LHY; PhLHY) regulates the daily expression pa
248 Finally, the decreased XyG abundance in hypocotyl longitudinal cell walls of germinating embryos
249 pstream regulators we identified a LONG PALE HYPOCOTYL (LPH) gene whose activity is indispensable for
253 also disordered the cellular arrangement of hypocotyls of Arabidopsis plants, resulting in a decreas
254 organ (cotyledons) and in rapidly elongating hypocotyls of Arabidopsis thaliana PIFs initiate transcr
259 ruption of BAS1 and SOB7 abolishes the short-hypocotyl phenotype of ATAF2 loss-of-function seedlings
260 background is likely causative for the long hypocotyl phenotype previously attributed to disrupted A
264 We measured either volume changes of single hypocotyl protoplasts or hypocotyl growth, both at high
268 ings expressing PIF3(K13R) show an elongated hypocotyl response, elevated photoprotection and higher
271 oy a custom image-based method for measuring hypocotyl segment elongation with high resolution and a
274 ed from upper (growing) regions of 3-day-old hypocotyls showed ploidy levels to be lower in abcb19 mu
280 ulations available for Arabidopsis etiolated hypocotyls to clarify how auxin is perceived and the dow
283 Cell elongation in the basal part of the hypocotyl under -DIF was restored by both 1-aminocyclopr
288 This newly synthesized auxin moves to the hypocotyl where it induces elongation of hypocotyl cells
290 l processes including cell elongation in the hypocotyl, whether or not it modulates cell proliferatio
291 ngs grow initially through elongation of the hypocotyl, which is regulated by signaling pathways that
292 ve morphological changes including elongated hypocotyls, which is predominantly regulated by a bHLH t
293 bidopsis thaliana line with longer etiolated hypocotyls, which overexpresses a gene encoding a polyga
294 t known, nor is their function understood in hypocotyls, which undergo considerable radial expansion.
295 expression of PIF4 induces constitutive long hypocotyls, while vasculature-specific expression of PIF
296 expansion; for example, epidermal cells from hypocotyls with reduced CP are longer than wild-type cel
297 -based reporter of mitosis throughout abcb19 hypocotyls without an equivalent effect on mitosis promp
300 iformly expressed throughout the Arabidopsis hypocotyl, yet decapitation experiments have localized t