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1 ntrogressed into a disease-susceptible maize inbred line.
2 sava and comparative analyses with a partial inbred line.
3 sing genetically modified substrains of this inbred line.
4 c background of cv. NC 84173, a fresh market inbred line.
5 numerous previously non-transformable maize inbred lines.
6 gene variants present in the many available inbred lines.
7 ompared with B73 and Tx601 maize susceptible inbred lines.
8 ed representation sequencing of 14,129 maize inbred lines.
9 scriptome-wide association studies using 505 inbred lines.
10 ata obtained by RT-qPCR technique from maize inbred lines.
11 other flavonols were identified in these two inbred lines.
12 of sequence variants among these widely used inbred lines.
13 netic Reference Panel (DGRP) of wild-derived inbred lines.
14 ion differences are inherited by recombinant inbred lines.
15 th 100% efficiency, allowing the creation of inbred lines.
16 panel of Drosophila melanogaster recombinant inbred lines.
17 in non-allelic positions in the two parental inbred lines.
18 nt inbred line families derived from diverse inbred lines.
19 s of having a large genome and lack of fully inbred lines.
20 ity of a large number of naturally occurring inbred lines.
21 a recessive, duplicate-factor trait in some inbred lines.
22 ormly leads to tolerance within standard MHC-inbred lines.
23 ation in populations generated from multiple inbred lines.
24 yellow1 (vey1) that varies between different inbred lines.
25 limited variations in their boundaries among inbred lines.
26 ified using eRD-GWAS on a panel of 369 maize inbred lines.
27 by crossing B73 and each of the three other inbred lines.
28 ssion (OE; B104 inbred) or knockout (KO; W22 inbred) lines.
29 genetic diversity in a diverse set of maize inbred lines; (2) determine the level of genetic diversi
35 eyed how the genetic divergence of two maize inbred lines affects the transcriptomic landscape in fou
36 g with a new advanced intercross-recombinant inbred line (AI-RIL) population, we show that a QTL tigh
38 identified in earlier studies with the same inbred lines and associated with biometrical, physiologi
41 equence polymorphisms among 27 diverse maize inbred lines and discovered that the genome was characte
42 es of several commonly used maize (Zea mays) inbred lines and has been anecdotally linked to enhanced
45 ragenotypic variability), we used Drosophila inbred lines and measured the spontaneous locomotor beha
46 mine the level of genetic diversity in INERA inbred lines and patterns of relationships of these inbr
47 enced North American Drosophila melanogaster inbred lines and present the first ever data set and ana
48 ints of floral transition of almost 30 maize inbred lines and show that tropical lines exhibit a dela
49 NILs derived from crosses between 18 diverse inbred lines and the recurrent inbred parent B73, referr
50 y comparing the microbiomes of diverse maize inbred lines and their F(1) hybrid offspring, which we q
51 ference persisted in hybrids and recombinant inbred lines and was mapped to a single expression quant
53 notypes, a mapping population of recombinant inbred lines, and a dense single-nucleotide polymorphism
57 the sets of transcribed genes in additional inbred lines, arising from inbred-specific DNA methylati
62 ated how the genetic divergence of the maize inbred lines B73 and Mo17 and their F1 hybrid progeny is
63 criptomic divergence of the maize (Zea mays) inbred lines B73 and Mo17 and their reciprocal F1 hybrid
64 MM to DNA sequencing data from the two maize inbred lines B73 and Mo17 to identify CNVs that may play
65 me shotgun (WGS) sequences for the two maize inbred lines B73 and Mo17 using k-mer analysis to quanti
69 analyses of the cuticular waxes of two maize inbred lines (B73 and Mo17), and their genetic hybrids,
72 ropagated tetraploid into a seed-propagated, inbred-line-based hybrid, but this process requires a be
73 y genome sequence is available for the elite inbred line BTx623, but functional validation of genes r
74 are not specific to the Col-Cvi recombinant inbred lines but have an epigenetic state that is inhere
75 ant of hybrid rice (derived from recombinant inbred lines) by comprehensively evaluating all possible
78 rmediate of transposition) in 98 recombinant inbred lines constructed from a line exhibiting high cop
79 hysiological comparison of maize recombinant inbred lines contrasting in RCA grown under suboptimal a
81 i (QTL) for total fitness in 398 recombinant inbred lines derived from a cross between locally adapte
84 We produced 1,636 MAGIC maize recombinant inbred lines derived from eight genetically diverse foun
88 r castaneus map, and a map constructed using inbred lines derived predominantly from M. m. domesticus
89 using an independent population of backcross inbred lines, derived from the same parents, which allow
90 RP) is a community resource of 205 sequenced inbred lines, derived to improve our understanding of th
91 rared imaging in a population of recombinant inbred lines developed from a cross between KS4895 and J
93 lines and patterns of relationships of these inbred lines developed from two sources; and (3) examine
97 hort-read sequence data from a single highly inbred line each from D. simulans, D. mauritiana, and D.
98 families composed of ~200 random recombinant inbred lines each from crosses between a common referenc
99 oss (CC) is a panel of eight-way recombinant inbred lines: eight diverse parental strains are interma
101 idopsis population of epigenetic recombinant inbred lines (epiRILs) for resistance against Hyaloperon
102 1-2 (ddm1-2)-derived epigenetic recombinant inbred lines (epiRILs) in Arabidopsis thaliana is well s
103 rge panel of isogenic epigenetic recombinant inbred lines (epiRILs) to derive a recombination map bas
104 c contribution to heterosis using epigenetic inbred lines (epiRILs) with varying levels and distribut
105 ng at elevated levels in the scutella of all inbred lines examined, kauralexins appear ubiquitous in
107 pping population, composed of 25 recombinant inbred line families derived from diverse inbred lines.
108 study was carried out to (i) assess a set of inbred lines for combining ability under stressed and op
110 Arabidopsis thaliana epigenetic recombinant inbred lines found no evidence in support of any role fo
111 of DNA methylation in five maize (Zea mays) inbred lines found that while DNA methylation levels for
112 AM) population, comprising 4,998 recombinant inbred lines from 25 biparental families, and in an asso
115 very close to the centromere in recombinant inbred lines from an intermated B73 x Mo17 population, s
120 -based genetic map by genotyping recombinant inbred lines from the intermated B73 x Mo17 population.
121 osynthesis in the flag leaves of recombinant inbred lines from wheat cultivars Seri M82 and Babax (SB
122 es, we genotyped an association panel of 508 inbred lines genotyped with a total of ~550,000 SNPs (Il
123 d 219 soybean accessions and 152 recombinant inbred lines genotyped with high-density markers and phe
127 c regions, which suggested that selection in inbred lines has been less efficient in these regions be
128 support the sequenced genomes of many maize inbred lines in addition to the B73 reference genome ass
133 s demonstrated by characterizing recombinant inbred lines, including Oh43, which has a point mutation
135 he same pattern was observed in historically inbred lines, indicating a high frequency of recessive l
136 ulation with a limited number of recombinant inbred lines, it is unnecessary to genotype the lines wi
137 response, we present the Joint Genotyper for Inbred Lines (JGIL) as a method for obtaining genotypes
138 c data for more than 1,000 different natural inbred lines led to the development of several data repo
139 ight-week old male mice from two recombinant inbred lines (LGXSM-6 and LGXSM-33) were subjected to ax
140 These results suggest that, at least in inbred lines like those examined here, mutational pressu
141 relatively resistant to MD and from another inbred line (line 7(2)) that is highly susceptible to MD
142 lowering time with a set of 5000 recombinant inbred lines (maize Nested Association Mapping populatio
143 In the Arabidopsis multiparent recombinant inbred line mapping population, a limited number of plan
146 semblies for the complex genome of the maize inbred line NC358 using PacBio datasets ranging from 20
147 ve resistance in maize, we evaluated a 5,000-inbred-line nested association mapping population for re
149 ing effect of other viruses, we generated an inbred line of flies with galbut virus as the only detec
150 embryos from crosses between two polymorphic inbred lines of Arabidopsis thaliana and used single-nuc
151 urally dispersing populations of recombinant inbred lines of Arabidopsis thaliana segregating early a
152 this issue by exposing a set of recombinant inbred lines of Arabidopsis thaliana to a simulated glob
153 e method to data from a panel of recombinant inbred lines of Arabidopsis thaliana, descended from 19
154 llocation among floral whorls in recombinant inbred lines of Brassica rapa in multiple environments t
155 of reproduction over ontogeny in recombinant inbred lines of Brassica rapa in the field and glasshous
158 in Mozambique was compared among recombinant inbred lines of common bean (Phaseolus vulgaris) having
160 ion spanning the bab1 and bab2 genes from 94 inbred lines of D. melanogaster sampled from a single lo
162 tary perturbation on metabolic traits in 146 inbred lines of Drosophila melanogaster and show that ge
164 variation of defensin genes was examined in inbred lines of Leghorn and Fayoumi chickens, and a dupl
165 Each member of a collection of 231 diverse inbred lines of maize constituting a high-resolution ass
166 plant height data involving 3502 recombinant inbred lines of maize planted in multiple discrete envir
167 ned incubation time data from five different inbred lines of mice with quantitative gene expression p
168 is a genetic reference panel of recombinant inbred lines of mice, designed for the dissection of com
169 variation in cone photoreceptor number among inbred lines of mice, identifying candidate genes that m
170 We find analogous results in recombinant inbred lines of the Bayreuth x Shahdara cross, which dif
171 l coma recovery) in the unrelated, sequenced inbred lines of the Drosophila melanogaster Genetic Refe
172 s at 1, 2, and 4 wk of age in the sequenced, inbred lines of the Drosophila melanogaster Genetic Refe
173 ariation in gene expression in the sequenced inbred lines of the Drosophila melanogaster Genetic Refe
174 in 3 thermal environments for the sequenced, inbred lines of the Drosophila melanogaster Genetic Refe
175 sophila life history traits in the sequenced inbred lines of the Drosophila melanogaster Genetic Refe
176 a recovery time, in the unrelated, sequenced inbred lines of the Drosophila melanogaster Genetic Refe
177 ter stages of development in 197 recombinant inbred lines of two different maize (Zea mays) populatio
178 eate large numbers of mutant embryos without inbred lines opens exciting new possibilities for studyi
179 hybrids to a control population selected on inbred line performance when the number of quantitative
180 hen introgressed by backcross into the maize inbred line PH09B, the mutant phenotype of vyl lasted mu
181 we generated a draft genome assembly of the inbred line PH207 to complement and compare with the exi
182 f samples in a subtropical maize recombinant inbred line population (CML444 x SC Malawi) subjected in
183 diverse cowpea accessions and a recombinant inbred line population (RIL) were SNP genotyped using an
184 ulation in rice grain by using a recombinant inbred line population and a backcross introgression lin
185 (Lemont) by indica (Teqing) rice recombinant inbred line population and focused on the genetic variat
190 tures within a Col-0 x Catania-1 recombinant inbred line population identified several loci each of w
191 Japan) x Kas-1 (Kashmir, India) recombinant inbred line population of Arabidopsis thaliana across so
194 ied by crossing a Columbia x C24 recombinant inbred line population to diploid A. arenosa pollen dono
201 g parents and descendants of two recombinant inbred line populations derived from two weed x crop cro
202 easurement of gene expression in recombinant inbred line populations has enabled investigation of the
203 lyses for seed longevity, in six recombinant inbred line populations, revealed five loci: Germination
205 -RIL (nested association mapping-recombinant inbred line) populations indicated that the drl loci res
207 reating phenotypic differences between these inbred lines provides results concordant with previous a
208 tested with a population of 26 diverse maize inbred lines, R. maidis produced more progeny on those w
209 through chronological sampling of 350 elite inbred lines representing multiple eras of germplasm fro
211 ing-(GBS) derived markers to map recombinant inbred line (RIL) and doubled haploid (DH) populations f
212 s) for the interspecific Petunia recombinant inbred line (RIL) population - P. axillaris x P. exserta
214 used to measure WUE(plant) in a recombinant inbred line (RIL) population created between the C(4) gr
215 ructed a new advanced intercross recombinant inbred line (RIL) population derived from a cross betwee
216 ion responses to priming using a recombinant inbred line (RIL) population derived from a cross betwee
217 ou9308's high yield potential, a recombinant inbred line (RIL) population derived from cross of Xieqi
218 basis of high yield potential, a recombinant inbred line (RIL) population derived from the cross betw
219 cessions, Col-0 and Bur-0, and a recombinant inbred line (RIL) population derived from these parents
220 ng - were employed to genotype a recombinant inbred line (RIL) population developed from a bi-parenta
221 rphisms (SNPs) identified in the recombinant inbred line (RIL) population of ICC 4958 (drought tolera
222 and analyzed in two F(6)-derived recombinant inbred line (RIL) populations derived from the crosses b
228 ecture of local adaptation using recombinant inbred lines (RIL) derived from a cross between two loca
229 d four introgressed PM resistant recombinant inbred lines (RIL, USVL531-PMR x USVL677-PMS) were perfo
232 polymorphism (SFP) detection in recombinant inbred lines (RILs) can capitalize on the high level of
234 netic map of a population of 210 recombinant inbred lines (RILs) derived from a cross between ZS97 an
236 ia as well as in a collection of recombinant inbred lines (RILs) derived from indica Jasmine-type var
237 rcross panel consisting of >1600 recombinant inbred lines (RILs) designed for the genetic dissection
238 dence, investigating a subset of recombinant inbred lines (RILs) developed by the Australian peanut b
239 population, consisting of 5,000 recombinant inbred lines (RILs) from 25 families representing the gl
240 ter:sweet compounds by analysing recombinant inbred lines (RILs) from an interspecific lettuce mappin
241 We developed a population of recombinant inbred lines (RILs) originating from a cross between the
242 A careful analysis of two maize recombinant inbred lines (RILs) relative to their inbred parents rev
244 notypically contrasting bulks of recombinant inbred lines (RILs) to identify Pm5e-linked markers.
246 munity consisting of two sets of recombinant inbred lines (RILs), each derived from an advanced gener
248 ments from seedlings in a variety of Pioneer inbred lines, routinely recovering healthy, fertile T0 p
249 rawberries (Fragaria vesca f. semperflorens) inbred lines-Ruegen F7-4 (a red-fruited genotype) and YW
250 anisms of differential infection of Zea mays inbred line SDp2 by Wheat streak mosaic virus (WSMV) iso
251 tential hybrids derived from 210 recombinant inbred lines, selection of the top 10 hybrids predicted
253 duction fixes recombinant haploid genomes in inbred lines, shaving years off the breeding process.
255 lly expressed genes between the two parental inbred lines significantly exceeded those of parent vers
256 d the number of active genes in the parental inbred lines significantly independent of treatment.
257 lone establishes systemic infection in maize inbred lines, sorghum (Sorghum bicolor), and green foxta
258 Highly recombinant populations derived from inbred lines, such as advanced intercross lines and hete
259 e segment substitution lines and backcrossed inbred lines suggested that NOMT is the underlying cause
260 number of recombinant events in recombinant inbred lines suggests that for a biparental population w
261 00 years has produced elite maize (Zea mays) inbred lines that combine to produce high-yielding hybri
262 ryos under investigation were from a pair of inbred lines that had been artificially selected for egg
264 ed mass features were present in >90% of the inbred lines, the majority were found in <50% of the sam
265 ng of seedling RNA from 503 maize (Zea mays) inbred lines to characterize the maize pan-genome, we id
266 creened a panel of sorghum (Sorghum bicolor) inbred lines to identify and characterize sorghum tolera
269 tically variable transcripts in wild-derived inbred lines to predict coregulated transcriptional netw
270 c distance estimators between pairs of maize inbred lines to predict genotypic variation for quantita
271 he dek phenotypes were introgressed into two inbred lines to take advantage of maize haplotype variat
272 sed transgressive segregation in recombinant inbred lines to test if this apparent species-wide (nonh
273 opulations created by crossing two temperate inbred lines to two photoperiod-sensitive tropical inbre
274 on tests on the maize-282-diverse-panel (282 inbred lines) under normal (25 degrees C) and chilling (
275 e inferred in silico based on their parental inbred lines using single nucleotide polymorphisms (SNPs
276 y 313.4-Mb genome sequence of a bottle gourd inbred line, USVL1VR-Ls, with a scaffold N50 of 8.7 Mb a
279 because genetic variation among wild-derived inbred lines was much lower than predicted from a neutra
280 -induced volatiles among 26 maize (Zea mays) inbred lines, we conducted a nested association mapping
281 conditions in three Brachypodium distachyon inbred lines, we describe the identification and the mai
282 rom our analysis of a diverse panel of maize inbred lines, we discovered high positive genetic correl
283 Exploiting wild accessions and recombinant inbred lines, we reveal extensive phenotypic variation i
284 from ear, tassel, and leaf of the B73 public inbred line were constructed at four developmental stage
285 expected heterozygosity (He) in these highly inbred lines were 0.291 and 0.359, respectively, which i
286 INERA and 41 exotic (temperate and tropical) inbred lines were characterized using 1057 SNP markers t
287 ve tissues from 27 genetically diverse maize inbred lines were deeply sequenced to identify genes exh
288 genome resequencing data from 61 additional inbred lines were enriched in organ-specific and stress-
289 closely examined beta-costic acid-deficient inbred lines were found to harbor Zmtps21 pseudogenes la
291 s of DNA methylation for 20 maize (Zea mays) inbred lines were used to discover differentially methyl
292 f 15.78 megabases) of the maize small-kernel inbred line, which is derived from a tropical landrace.
293 l root length' (TRL) were predicted for 2431 inbred lines, which had previously been genotyped by seq
294 using mixed sequence data of two Drosophila inbred lines, which was a novel validation approach for
295 There was genetic diversity among INERA inbred lines, which were genetically less closely relate
296 ny times in parallel, to create a new set of inbred lines whose genomes are random mosaics of the gen
298 ng of 200 Drosophila Genetic Reference Panel inbred lines with complete genome sequences and for whic
299 encapsulation ability of crickets from eight inbred lines with that of crickets from the outbred foun
300 istory in a set of Brassica rapa recombinant inbred lines within and across field and greenhouse envi