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1 richia coli generated a fully functional C31 integrase.
2 nt DNA structures by the conserved Cas1-Cas2 integrase.
3 ertion events catalyzed by E. coli Cas1-Cas2 integrase.
4 cation: reverse transcriptase, protease, and integrase.
5 TI on HIV-2 clinical isolates with wild-type integrase.
6 ral cellular and HIV proteins, including the integrase.
7 (CCD) and the C-terminal domain (CTD) of the integrase.
8 ith those observed for prototype foamy virus integrase.
9 plication and is catalyzed by the retroviral integrase.
10 ystem for understanding DDE transposases and integrases.
12 ino-acid insertion at codon 231 of the HIV-2 integrase (231INS)-in 6 patients at the virological fail
13 We report single-DNA experiments for Bxb1 integrase, a model SR, where dynamics of individual syna
14 oteins: protease, reverse transcriptase, and integrase; a comparative analysis reveals that NNRTI-ind
15 tructures highlight how small changes in the integrase active site can have notable implications for
16 end after 3' processing, displacing from the integrase active site the DNA 3'-hydroxyl group that is
17 s of Cas4 that closely interact with the two integrase active sites of Cas1, suggesting a mechanism f
20 nd host attB sites is promoted by the serine integrase alone, giving recombinant attL and attR sites,
21 factor-p75 (LEDGF/p75)-binding site on HIV-1 integrase, an attractive target for antiviral chemothera
22 a gene cluster encoding for transporters, an integrase and a dioxygenase were involved in BAC biotran
23 ecombination reactions mediated by varphiC31 integrase and its RDF, and use these data as the basis f
26 the forward and reverse reactions using the integrase and the integrase-RDF fusion, respectively.
27 offer novel hypotheses for the enrichment of integrase and transposase genes in cryptic prophages.
31 logy of multiple mobile DNAs, imprecision of integrases and transposases, and differential activity a
32 otide and 100% protein identity to the VPI-1 integrase, and attachment (att) sites 100% identical to
33 rgeting HIV reverse transcriptase, protease, integrase, and coreceptor CCR5 with EC50's ranging from
34 opies per 10(6) cells), negative for psi and integrase, and negative by the intact proviral DNA assay
35 enzymes-reverse transcriptase, protease, and integrase-and have had the satisfaction of knowing that
37 fferences between transposase and CRISPR-Cas integrase are largely architectural, and it appears that
42 ir, an antiretroviral agent that targets HIV integrase, as a pharmacologic inhibitor of ALDOA-gamma-a
44 ions were each bordered by two nonhomologous integrase attachment (att) sites, which together compris
48 egrase hypermultimerization, which precludes integrase binding to genomic RNA and perturbs the morpho
49 ow, Kessl et al. report a second function of integrase: binding to the viral RNA genome in virion par
55 e site-preference of integration by the Cas1 integrase (casposase) encoded by the casposon of the arc
59 e first stage of CRISPR immunity, the Cas1-2 integrase complex captures invader-derived prespacer DNA
60 The conserved Cas1 and Cas2 proteins form an integrase complex consisting of two distal Cas1 dimers b
62 cers into CRISPR loci requires the Cas1/Cas2 integrase complex, frequently in combination with Cas4 e
65 odels of HIV-1 genomic RNA, nucleocapsid and integrase condensed into a mature ribonucleoprotein comp
66 we use click chemistry to label viruses with integrase coupled to eGFP (HIV(IN-eGFP)) and visualize v
67 -processing reaction; this cleavage leads to integrase-dependent integration, highlighted by a 5-bp d
68 atalysis while another pair of non-catalytic integrase dimers bridge between the two viral DNA molecu
69 ic assembly of integrase, in which a pair of integrase dimers engage viral DNA ends for catalysis whi
70 r of prototype foamy virus, and two flanking integrase dimers that engage the core structure via thei
71 icient to catalyse integration, the flanking integrase dimers were necessary for mouse mammary tumour
74 teric integrase inhibitors (ALLINIs), engage integrase distal from the enzyme active site, namely at
77 of structurally distinct, kinetically stable integrase-DNA product complexes, dependent on the presen
79 These discoveries reveal mechanisms by which integrases dramatically manipulate bacterial genomes to
80 tionally discuss the latest advances on anti-integrase drug development for the treatment of AIDS and
82 site promote aberrant multimerization of the integrase enzyme and are of significant interest as HIV-
88 tegrase-DNA complexes have been reported for integrase from prototype foamy virus featuring an additi
89 port a crystal structure of the three-domain integrase from Rous sarcoma virus in complex with viral
90 The current report examines whether phiC31 integrase functions efficiently in mammalian cells when
91 eukemia virus (MLV) system consisting of MLV-integrase fused to enhanced green fluorescent protein (M
92 raints imposed by the nucleosomal structure, integrase gains access to the scissile phosphodiester bo
94 qnrA, sul1, tet(A), tet(W), and tet(X)], the integrase gene of class 1 integrons (intI1), and 16S rRN
95 e chromosomal location as VPI-1, contains an integrase gene with 94% nucleotide and 100% protein iden
98 e ICE integration and to confirm the role of integrase genes intS, intM, and intG in this process.
99 ve virion assembly protein (gp17), the phage integrase (gp29), the endolysin (gp31), the phage repres
102 LLINIs inhibit HIV-1 replication by inducing integrase hypermultimerization, which precludes integras
103 er of human immunodeficiency virus 1 (HIV-1) integrase (IN) alterations, referred to as class II subs
104 been implicated in inhibiting homologous HIV integrase (IN) and influenza endonuclease via metal chel
105 n is catalysed by the virally encoded enzyme integrase (IN) and is facilitated by viral genus-specifi
106 rder nucleoprotein complex composed of viral integrase (IN) and the ends of linear vDNA, mediates int
108 lubility and aggregation properties of HIV-1 integrase (IN) are major obstacles for biochemical and s
109 evidence indicates that inhibition of HIV-1 integrase (IN) binding to the viral RNA genome by allost
115 ridine-based multimerization selective HIV-1 integrase (IN) inhibitors (MINIs) are a distinct subclas
117 utants can also rescue a replication-delayed integrase (IN) mutant, and exhibit reduced sensitivity t
118 ORTANCE Recent evidence indicates that HIV-1 integrase (IN) plays a key role during particle maturati
121 RTI)-naive and 252 NRTI-treated persons; and integrase (IN) sequences from 236 IN inhibitor (INSTI)-n
125 otease (PR), reverse transcriptase (RT), and integrase (IN) variability presents a challenge to labor
126 Productive HIV-1 replication requires viral integrase (IN), which catalyzes integration of the viral
127 ation is catalysed by the retrovirus-encoded integrase (IN), which forms a tetramer or octamer comple
131 The structure shows an octameric assembly of integrase, in which a pair of integrase dimers engage vi
134 entry inhibitor, but not by raltegravir, an integrase, indicating that only early life cycle events
137 The findings support guidelines recommending integrase inhibitor based regimens in first-line antiret
138 nhibitor-based, 100% (95% CI, 91%-100%); and integrase inhibitor based, 95% (95% CI, 83%-99.4%).
139 ong-acting injectable formulation of the HIV integrase inhibitor cabotegravir (CAB-LA) is currently i
140 ng-acting injectable cabotegravir is a novel integrase inhibitor currently in advanced clinical devel
146 ir recommended as a preferred or alternative integrase inhibitor for pregnant women living with HIV.
147 d virological failure with resistance in the integrase inhibitor group compared with three participan
151 y acquired significant resistance to APV, an integrase inhibitor raltegravir, and a GRL-09510 congene
152 289 were randomly assigned to receive the integrase inhibitor regimen and 286 to receive the prote
153 the safety and efficacy of the single tablet integrase inhibitor regimen containing elvitegravir, cob
154 citabine, and tenofovir disoproxil fumarate (integrase inhibitor regimen) or ritonavir-boosted atazan
155 have compared the safety and efficacy of any integrase inhibitor to efavirenz when initiated during p
156 h viral replication and raltegravir (RAL; an integrase inhibitor) suppression, mimicking active and A
157 a three-drug regimen that did not include an integrase inhibitor, future research should focus on par
158 significantly shorter in those receiving an integrase inhibitor- versus a protease inhibitor-based r
160 in PLWH treated with newer drugs (including integrase inhibitor-based regimens), with fat gain due t
161 ion and might be better tolerated than other integrase inhibitor-based single-tablet regimens, but lo
162 ment is associated with long-term failure of integrase inhibitor-containing first-line regimens, and
164 genotypes exclude testing for resistance to integrase inhibitors ("IR testing"), although this class
167 inding to the viral RNA genome by allosteric integrase inhibitors (ALLINIs) or through mutations with
168 f HIV-1 integrase inhibitors, the allosteric integrase inhibitors (ALLINIs), engage integrase distal
169 , 1.76 per 10 U/L; P < .01), and exposure to integrase inhibitors (aOR, 1.28 per year; P = .02) were
170 lability were analyzed for NTD reports for 4 integrase inhibitors (DTG, raltegravir, elvitegravir, bi
171 TIs (NNRTIs), protease inhibitors (PIs), and integrase inhibitors (IIs) did not affect HK2, except fo
172 ed the prevalence of PDDIs in the era of HIV integrase inhibitors (INIs), characterized by more favor
181 Although antiretroviral regimens containing integrase inhibitors rapidly suppress HIV viral load in
189 HK022 coliphage site-specific recombinase Integrase (Int) can catalyze integrative site-specific r
190 tion is mediated by a non-canonical tyrosine integrase (Int) lacking an N-terminal domain typically a
193 phaScreen binding assays, revealing that the integrase interacts with the N-terminal half of TRN-SR2
194 his transition was possible, we have evolved integrase IntI1 to what should correspond to an early in
197 EDGF) and human immunodeficiency virus (HIV) integrase is an important possible strategy for anti-vir
198 d residue Q146 in the flexible loop of HIV-1 integrase is critical for productive viral DNA binding t
200 iscovery of a fully programmable, RNA-guided integrase lays the foundation for genomic manipulations
201 efficiently cleaved in vitro by recombinant integrases, leading to the formation of linear 3'-proces
202 actively transcribed euchromatin, where the integrase-LEDGF/p75 interaction drives integration into
206 ites within the COL1A locus to enable phiC31 integrase mediated introduction of transgenes has been g
207 be efficiently used as a substrate in HIV-1 integrase-mediated integration both in vitro and in euka
210 action site and disrupt the structure of the integrase multimer that is required for the HIV-1 matura
214 ecognition of NSD3, LANA of herpesvirus, and integrase of MLV, which involves formation of an intermo
215 eated healthy rhesus macaques with protease, integrase, or reverse transcriptase inhibitors for 1 to
216 decreases nonspecific activity of Cas1-Cas2 integrase outside the leader-proximal region of a CRISPR
217 x, p17), reverse transcriptase (p66/51), and integrase (p31) were serially measured using quantitativ
218 sertion elements, transposons, prophages and integrases - paying testament to past genomic promiscuit
219 resultant IGEs from 2168 genomes, along with integrase phylogenetic analysis and gene inactivation te
221 e direct interaction between TRN-SR2 and HIV integrase predominantly involves the catalytic core doma
225 s that focus on cellular components of viral integrase protein interactions can be used to combat the
227 f 605- and 613-amino-acid versions of phiC31 integrase protein to mediate efficient, site-specific in
229 ic process is catalyzed by the virus-encoded integrase protein, which is conserved among retroviruses
231 efficiency and single-protein convenience of integrase-RDF fusion proteins make them potentially very
233 or changes in the length and sequence of the integrase-RDF linker peptide did not affect fusion prote
234 -Recombination Directionality Factor fusion (Integrase-RDF) that efficiently catalysed the reverse at
235 n directionality factor (RDF) in addition to integrase; RDF activates attL x attR recombination and i
236 ese results explain how the Cas1-Cas2 CRISPR integrase recognizes a sequence-dependent DNA structure
237 ins to control the reconstitution of a split Integrase-Recombination Directionality Factor fusion (In
240 y with single-copy sensitivity targeting the integrase region of HIV-1 (integrase single-copy assay [
242 (HIV-1) protease, reverse transcriptase, and integrase sequences-three genes that are commonly sequen
243 ity targeting the integrase region of HIV-1 (integrase single-copy assay [iSCA] v1.0) has been widely
246 core, we have designed and synthesized a new integrase strand transfer (INST) inhibitor type featurin
247 rse-transcriptase inhibitor (43%), NRTI plus integrase strand transfer inhibitor (25%), and NRTI plus
248 oup experienced VF without resistance to the integrase strand transfer inhibitor (INSTI) class; 1 pat
249 t-line combination therapy that includes the integrase strand transfer inhibitor (INSTI) dolutegravir
250 ir (CAB) long-acting injectable (CAB LA), an integrase strand transfer inhibitor (INSTI), reduces dos
252 older antiretroviral therapy (ART) to newer integrase strand transfer inhibitor (INSTI)-based regime
254 The base case prevalence of transmitted integrase strand transfer inhibitor (INSTI)-resistant (I
257 ranscriptase inhibitor (0.68 [0.51-0.90]) or integrase strand transfer inhibitor use (0.26 [0.13-0.53
261 , and tenofovir alafenamide is a once-daily, integrase strand transfer inhibitor-based regimen approv
269 All recent treatment guidelines recommend integrase strand transfer inhibitors (INSTIs) as compone
274 iveness of the first-generation FDA-approved integrase strand transfer inhibitors (INSTIs), raltegrav
280 el, extended coiled-coil (CC) domains in the integrase subunits are proposed to interact in a way tha
281 se new methods to a recently reported manual integrase-targeting single-copy assay version 2 (iSCA v2
283 he viral DNA ends and structurally mimic the integrase tetramer of prototype foamy virus, and two fla
284 e we describe allosteric inhibitors of HIV-1 integrase that bind to the LEDGF/p75 interaction site an
285 29 as potent allosteric inhibitors of HIV-1 integrase that exhibited low nanomolar antiviral potency
286 ->serine (G140S) amino acid substitutions in integrase that result in clinical INSTI failure perturb
288 CRISPR-Cas systems depend on the Cas1-Cas2 integrase to capture and integrate short foreign DNA fra
289 antibody mimics the effect of binding of HIV integrase to LEDGF which is crucial for HIV propagation.
291 rative vector in which the gene encoding the integrase was deleted to increase its stability, and (ii
293 To clarify the mechanism of DNA looping by integrase, we determined a 3.9 angstrom resolution struc
294 ta for the complex of TRN-SR2 with truncated integrase, we propose a molecular model of the complex.
295 a baseline genotypic resistance test of the integrase, we studied the impact of minor integrase resi
296 le that are involved in the interaction with integrase were identified using AlphaScreen binding assa
298 In addition, the G140S-Q148H (SH) mutant integrase, which has a reduced 3'-processing activity, b
299 Our findings support a model of a minimal integrase with an internal ruler mechanism that favors s