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1 s), and 68 meningococci had the capsule-null intergenic region.
2 lated by a bidirectional promoter within the intergenic region.
3 osite orientations, separated by a noncoding intergenic region.
4 on the opposite DNA strand in the psbT/psbH intergenic region.
5 haracterize YqjI regulation of the yqjH-yqjI intergenic region.
6 scape to contain the full upstream PAX6-RCN1 intergenic region.
7 sequence (UAS)(INO) (E-box) sequences in the intergenic region.
8 npA), a hypothetical protein gene, and in an intergenic region.
9 PntR bound only the corresponding pntR-gapR intergenic region.
10 ential PecS binding sites were found in this intergenic region.
11 t occurred from factors within the SNA3-INO1 intergenic region.
12 e N gene and a novel 6-nt insert in the HN-L intergenic region.
13 e of 15,198 nt and a 6-nt insert in the HN-L intergenic region.
14 tiation remains unexpectedly high across the intergenic region.
15 onserved regulatory element in the noncoding intergenic region.
16 second binding site located in the manX-manY intergenic region.
17 tor sites positioned in the NWMN_0027-0026.5 intergenic region.
18 reading frame (ORF) (GAL1-YLR454W) or in an intergenic region.
19 hich binds to two operators in the simR-simX intergenic region.
20 en inserted into each isolate at a conserved intergenic region.
21 ressive histone mark H3K9me3 in the Il2-Il21 intergenic region.
22 -enhancers demonstrated extensive binding at intergenic regions.
23 tion start sites, within gene bodies, and in intergenic regions.
24 moters in gene bodies and non-coding RNAs in intergenic regions.
25 matin accessibility at a large subset of the intergenic regions.
26 ally targets transposable elements (TEs) and intergenic regions.
27 GC-rich regions and located predominantly in intergenic regions.
28 ted leader sequences, antisense strands, and intergenic regions.
29 ination bias toward both high GC content and intergenic regions.
30 ncoding RNAs, regulatory elements, and other intergenic regions.
31 Five states map mainly to genes and five to intergenic regions.
32 oter-proximal regions to the gene bodies and intergenic regions.
33 s selected more features from non-CpG island intergenic regions.
34 D hotspots occur almost equally in genic and intergenic regions.
35 pped reads were also found from intronic and intergenic regions.
36 ce sites, 5' and 3' UTRs, non-coding RNA and intergenic regions.
37 promoters, coding exons, introns and distal intergenic regions.
38 rity of these sites are present in predicted intergenic regions.
39 alities found in human cancer are located in intergenic regions.
40 nscribed regions, both within introns and in intergenic regions.
41 ranslocatome by increasing rearrangements to intergenic regions.
42 her transposon classes, as well as genic and intergenic regions.
43 hisms (SNPs) from 46 candidate genes and two intergenic regions.
44 polyA) transcripts originating from presumed intergenic regions.
45 on start sites (TSSs), mainly in introns and intergenic regions.
46 rious genomic locations, including genic and intergenic regions.
47 s bind most or all of their strong motifs in intergenic regions.
48 ts, such as promoters, exonic, intronic, and intergenic regions.
49 ns (UTRs), but it is depleted on introns and intergenic regions.
50 ication by investigating its localization to intergenic regions.
51 nannotated genomic segments corresponding to intergenic regions.
52 d burden of short deletions was primarily in intergenic regions.
53 g chromatin accessibility in gene bodies and intergenic regions.
54 DNMT3A and maintenance of DNA methylation at intergenic regions.
55 trand switch regions, telomeric regions, and intergenic regions.
56 gnition of DNA photoproducts, prevalently in intergenic regions.
57 1, DHRS12, ITPK1, ACSF3 and TNFRSF13C, and 2 intergenic regions.
58 ier microsatellite loci located in conserved intergenic regions.
59 hylation are localized to CpG islands within intergenic regions.
60 majority of detected heteroplasmies occur in intergenic regions.
61 dentified signals include two that reside in intergenic regions (1q31.1 and 5p13.1) and three residin
62 strongest is located on chromosome 2, in an intergenic region 35- to 80-kb upstream from the thyroid
64 tioned rice genome showed that regulatory or intergenic regions account for the most trait heritabili
67 nscriptional regulation within the yqjH-yqjI intergenic region and suggest a possible model for commu
68 RH50 binds to transcripts of the 23S-4.5S intergenic region and, in its absence, levels of the cor
69 border regions between domains contain large intergenic regions and a high density of transcription f
70 ng transcriptionally silent chromatin within intergenic regions and at the border of euchromatin and
74 al activity in most non-PcG target genes and intergenic regions and is governed by opposing roaming a
75 we mapped many transcription start sites in intergenic regions and opposite to annotated genes, demo
76 we show that BORDER proteins are enriched in intergenic regions and prevent interference between clos
77 nd observed an enrichment of hotspots in its intergenic regions and repetitive DNA, which is consiste
78 i-cistronic operons with rationally designed intergenic regions and systematically increased upstream
80 coding RNA complementary to the 4.5S-5S rRNA intergenic region, and its presence correlated with that
81 odels included SNPs in BCL11A, the HBS1L-MYB intergenic region, and the site of the HBB gene cluster,
83 any of the undermethylated sites occurred in intergenic regions, and for most of these sites, we iden
85 l coding sequences, complex genomic regions, intergenic regions, and methylation motifs revealed smal
86 ores, enriched within gene bodies but not in intergenic regions, and preferentially harbored binding
87 bserve that the genome is more accessible in intergenic regions, and that increased accessibility is
88 coding regions and introns when compared to intergenic regions, and these effects are increased in a
89 introns), while being depleted in coding and intergenic regions, and these findings may have biologic
90 (rRNA) processing, many coding sequences and intergenic regions appeared to be direct targets of RNas
92 er through the realization that mutations in intergenic regions are actually within unannotated small
93 ell embryos is highly promiscuous, such that intergenic regions are extensively expressed and thousan
95 evealed massive gene losses and reduction of intergenic regions as factors leading to their drastical
96 uble-strand breaks (DSBs) in the MATa1-MATa2 intergenic region, as we demonstrate both in vivo and in
97 processed forms of both genes linked by the intergenic region, as well as other transcripts in which
98 t may be transcribed: coding, noncoding, and intergenic regions, as well as repetitive elements, telo
100 x 10(-13); effect size = 12%) and a further intergenic region at 6p21.33 (cg06126421, P = 4.96 x 10(
103 renamed McaS, was predicted to reside in an intergenic region between abgR, encoding a transcription
104 One of these, at chromosome 11p13, is an intergenic region between Ets homologous factor (EHF) an
107 ated within a predicted super-enhancer in an intergenic region between HLA-DRB1 and HLA-DQA1, localiz
108 regions go through substantial changes: the intergenic region between NP and VP35, as well as the fi
109 R binds directly to a specific region in the intergenic region between ohr and ohrR that shares exten
111 entified 28 targets of PA2588, including the intergenic region between PA2588 and pqsH, which encodes
112 PecS, which exists as a homodimer, binds the intergenic region between pecS and pecM genes with high
113 pts involving parts of PPP3R1, CNRIP1 and an intergenic region between PLEK and CNRIP1, in the blood
115 Tandem repeats were frequently found in the intergenic region between the prophage at the 3' end and
118 ame (locus tag: bglu_2g14480) located in the intergenic region between tofI and tofR was found to be
119 ter plasmid containing both the OriS and the intergenic region between VZV open reading frames (ORFs)
121 has been done to describe the rat Chrnb4/a3 intergenic region, but few studies have examined the hum
123 IRES of Israeli acute paralysis virus (IAPV) intergenic region captures and redirects translating rib
124 15 GANTC sites, preferentially positioned in intergenic regions, changed progressively from full to h
125 G, NID1, DHRS12, ITPK1, ACSF3, TNFRSF13C and intergenic region chr10p12.31 was replicated in a cohort
127 with the Aspergillus ST/AF clusters and its intergenic regions contain 14 putative binding sites for
128 : 1.09 x 10(-6)) in a highly conserved 32 kb intergenic region containing regulatory elements between
130 was recruited by the cricket paralysis virus intergenic region (CrPV IGR) IRES to form a stable 40S-I
131 ion in CpG island (CGI) and demethylation in intergenic regions, defined as 'backbone', largely vary
132 assemia deletion, which retains the required intergenic region, deletes other surrounding sequences,
134 letions that shorten the total length of the intergenic region disrupt the ability of YqjI to regulat
135 ty of identified pA sites were mapped to the intergenic regions downstream of previously annotated EB
136 ion, but few studies have examined the human intergenic region effects on expression; therefore, thes
137 ften, 24-nt-dominated siRNA loci occurred in intergenic regions, especially at the 5'-flanking region
138 d are more likely to occur in the genic than intergenic regions, especially common in the 5'- and 3'-
139 orphic genes which are separated by a 227 bp intergenic region: first, the secreted form as previousl
143 contains hundreds of V(H)s, separated by an intergenic region from Igh Ds, J(H)s, and constant regio
145 Across five categories of genomic regions, intergenic regions had the highest SNP density and avera
146 transmembrane domains, and that thymine-rich intergenic regions harbor a widespread potential to prod
147 Further, we found that GC-rich genes and intergenic regions have higher levels of genetic diversi
149 trol modules, spread throughout the flanking intergenic region, have regulatory activities that overl
150 s have identified common variants within the intergenic region (HBS1L-MYB) between GTP-binding elonga
151 f somatic mutation across exons, introns and intergenic regions highlights the repertoire of cancer g
152 ociated haplotype blocks are in intronic and intergenic regions, hindering their functional evaluatio
153 5' and 3' untranslated regions as well as in intergenic regions, identification and validation of tru
154 asmids containing the 255-bp lsrACDBFG-lsrRK intergenic region (IGR) fused to lacZ showed that essent
155 re we document that the arenavirus noncoding intergenic region (IGR) has a high degree of plasticity
158 some, we took advantage of the IRES from the intergenic region (IGR) of the Cricket Paralysis Virus.
159 proach involved replacement of the noncoding intergenic region (IGR) of the L genome segment with the
160 ide (nt) deletion (Delta39) in the noncoding intergenic region (IGR) of the viral large (L) segment t
161 We have recently shown that the noncoding intergenic region (IGR) present in each arenavirus genom
163 on and a point mutation within the L-segment intergenic region (IGR), and three silent changes in the
164 irus using the previously reported L segment intergenic region (IGR), comprising the arenaviral trans
168 ), HDL-cholesterol (PHOSPHO1, SYNGAP1 and an intergenic region in chromosome 2) and triglycerides (MY
169 level of the pnp transcript initiated in the intergenic region in JSE1880, we utilized that transcrip
171 (TUCs) along the genomic sequence; (ii) the intergenic regions in front of the first gene of each TU
172 creases in promoter regions and decreases in intergenic regions in pre-iPSCs, then recovers to an int
174 overrepresentation of RNAs from introns and intergenic regions in testes of Cstf2t(-/-) mice, and a
175 e longer and more conserved than the average intergenic regions in the corresponding bacterial genome
176 These SNPs were distributed in genic and intergenic regions in the eight pseudomolecules of the p
177 Microsatellite mapping found a bias toward intergenic regions in the nonconserved microsatellites a
178 t microsatellite mapping found a bias toward intergenic regions in the nonconserved microsatellites a
180 ed-end Illumina sequencing of ssDNA revealed intergenic regions, including replication origins, as ho
181 of these extension products to the rpsO-pnp intergenic region indicated that all four putative trans
184 omosome reporters, we discovered that the 5' intergenic region, introns 2 and 6 of human telomerase g
186 ted that the template-switching event during intergenic region (IR) sgmRNA synthesis occurs at the 5'
188 of proposed P site binding domains from two intergenic region IRES RNAs bound to bacterial 70S ribos
190 orders, including short (4- or 5-nucleotide) intergenic regions (IRs), a single long (144-nucleotide)
192 single-nucleotide polymorphisms (SNPs) in an intergenic region located between the oncogenes MYC and
193 and the architecture of the lsrACDBFG-lsrRK intergenic region may control the expression of these op
195 ing disruptive missense RVs of NPC1L1 and an intergenic region near APOC1P1 associated with low-densi
196 d rs11048230 (P=4.77x10(-8); MAF=0.10) in an intergenic region near RASSF8 (associated with vascular
197 y study putative DNA regulatory sequences in intergenic regions near chloroplast genes in seven plant
201 .71 x 10(-10), rs16891982), and revealed the intergenic region of BEND7 and PRPF18 as a novel locus a
204 ts identified binding sites in the phnD-phnF intergenic region of M. smegmatis has allowed us to prop
206 gle nucleotide polymorphism at the trnL-trnF intergenic region of the chloroplast chromosome was conf
208 ription start site was identified within the intergenic region of the miR-183 cluster, which may regu
209 ong noncoding transcripts (>200 nt) from the intergenic regions of annotated protein-coding genes.
210 cteristic of BFB; instead PDE9A was fused to intergenic regions of chromosome 21 or to genes on other
211 genomes shows many cases of association with intergenic regions of genes with altered expression due
213 ensive transcriptional activity occurring in intergenic regions of genomes has raised the question wh
214 amming distance seeds to ncRNA search in the intergenic regions of human and mouse genomes and betwee
216 heory based sigma70 model indicates that the intergenic regions of salt-responsive genes are enriched
217 ensity of sigma70 promoter-like sites in the intergenic regions of salt-responsive genes drives the R
218 and un-annotated exon boundaries, including intergenic regions of the genome, with high statistical
221 genomes of the diploid progenitors, but the intergenic regions of the Q/q locus are highly divergent
223 c noncoding RNAs (lincRNAs) transcribed from intergenic regions of yeast and animal genomes play impo
224 etected and showed that the presence, within intergenic regions, of sigma(70) promoters and sequences
226 we demonstrate that the HELLP locus is in an intergenic region on 12q23.2 between PMCH and IGF1.
227 gnificant associations at two novel loci: an intergenic region on 9p21.3 (rs12553324, P = 5.87 x 10 (
228 nflammatory states, maps to the 5' end of an intergenic region on Chr11p13 that is implicated as a mo
229 Here, we show that polymorphism at a remote intergenic region on chromosome 11q13.3, recently identi
230 ree loci located in GABBR2, RUFY3, and in an intergenic region on chromosome 2 replicated with the sa
231 ificance level at less than 5.0 x 10(-8): an intergenic region on chromosome 2q32.3, close to nucleic
232 olymorphisms (SNPs) (r(2)>0.9) located in an intergenic region on chromosome 3q26 were associated wit
233 evidence for association was observed in an intergenic region on chromosome 4 (rs753129; 'AD+PvAD-P'
234 AR*D) or escitalopram (GENDEP) identified an intergenic region on chromosome 5 associated with early
235 d loci (CAV1-CAV2, CDKN2B-AS1, SIX1-SIX6, an intergenic region on chromosome 8q22, ABCA1, GAS7, AFAP1
236 ignificant loci were identified including an intergenic region on chromosome 9 that has previously be
238 CFAP45, AFF3, TP73, UBCLP1, RPL13P, and two intergenic regions (p values < 0.0001 were confirmed usi
239 egulatory regions, as well as the intra- and intergenic regions, particularly in the X-chromosome amo
240 nt along the telomere-centromere axis in the intergenic regions, positively correlated with the dista
241 now only sparsely documented, namely longer intergenic regions, post-horizontal gene transfer (HGT)
242 regulated loci correspond to transposons and intergenic regions producing 24-nucleotide siRNAs that g
244 exome sequencing data: reads in introns and intergenic regions, reads in the mitochondrial genome, a
245 ic control region 1 (IGCR1) in the V(H)-to-D intergenic region regulates Igh V(D)J recombination in t
247 pendent reporter gene cassette located in an intergenic region remained silent, indicating that the t
248 ns resulted in the identification of a small intergenic region required for gamma-globin (fetal hemog
249 onic regions compared to heterochromatic and intergenic regions, respectively, and depletion of MSI a
250 n of a 198-nucleotide sequence into the HN-L intergenic region, resulting in reduced viral gene expre
251 f a 605-bp region within the RPA135-tK(CUU)P intergenic region results in a reduction in the RPA135-I
252 tes (DHSs) spanning the entire upstream IL-3 intergenic region revealed the existence of a complex cl
253 S_NmUC isolates was an IS1301 element in the intergenic region separating the capsule ctr-css operons
254 NA genome, with an 827 nt-long 5' UTR and an intergenic region separating two open reading frames.
255 tribution of several non-B DNA motifs within intergenic regions separating divergently oriented opero
256 BCG1, CPT1A, MYLIP, TXNIP and SLC7A11) and 2 intergenic regions showed differential methylation in as
257 indromic (REP) elements within the yqjH-yqjI intergenic region shows that these sequences are not req
258 ed by RNA polymerase II and map to low-copy, intergenic regions similar to PIWI-interacting RNAs (piR
260 ase on the X-chromosome, and an elevation in intergenic regions suggesting that chromatin structure m
261 tion from its own promoter by binding to the intergenic region, suggesting that SMU.1349 acts as both
262 cted, nucleotide diversity is much higher in intergenic regions than within gene bodies (regions span
263 a 75-bp sequence within the RPA135-tK(CUU)P intergenic region that is involved in the interaction.
264 d and confirmed a one-nucleotide indel in an intergenic region that significantly alters global trans
265 ng use of an alternative genetic code, large intergenic regions that are highly expressed and up to 3
266 evising several methods to select subsets of intergenic regions that can concentrate these rare RNA c
267 icular interest is DNA variations located in intergenic regions that comprise regulatory sites for TF
269 To identify a comprehensive set of genes and intergenic regions that impacts fitness in S. elongatus,
272 and end sites, and when they are located in intergenic regions they are located near regulatory fact
274 icient resolution in the larger intronic and intergenic regions to identify copy number changes.
275 gulator in Chlamydia, can bind to the trpRBA intergenic region upstream of the alternative trpBA prom
277 ontrol is mediated by binding of MarA to the intergenic region upstream of the ycgZ-ymgABC operon.
282 es in both the vah1-plp and rtxH-rtxB genes' intergenic regions were determined using 5' random ampli
286 H3K27me3 mark were more abundant (> 80%) in intergenic regions, whereas DBSs for H3K4me3 were distri
287 4.8 kb miR-183 family cluster, including the intergenic region which contains highly conserved genomi
288 We applied this methodology to the HBS1L-MYB intergenic region, which is associated with red-blood-ce
289 results indicate that sRNAs are enriched in intergenic regions, which are longer and more conserved
290 WAS) appear to be located within intronic or intergenic regions, which makes it difficult to interpre
292 with a transposon insertion in the upstream intergenic region, while FT2c and FT2d obtained a transp
293 to DNA from both the penR-gapN and penM-penH intergenic regions, while PntR bound only the correspond
294 Stringtie was then performed to identify the intergenic regions whose expression was influenced by th
295 nd purified OhrR interacts with the ohr-ohrR intergenic region with a greater affinity and this inter
296 We show that XdhR binds the xdhABC-xdhR intergenic region with high affinity (Kd approximately 0
297 us PecS binds two sites within the pecS-pecM intergenic region with K(d) = 0.3 +/- 0.1 nM, a binding
299 of 6mA reveals that this mark is enriched at intergenic regions, with a preference for certain superf