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1 proteasome subunits, more than half of them intersubunit.
2 t high glutamate concentrations, the initial intersubunit activation of mGluR1 proceeds with millisec
6 ties that depend on multimerization, such as intersubunit allostery or the capacity to do mechanical
8 hexameric architecture that is stabilized by intersubunit and interdomain interactions of LRRNT and L
10 tructural studies have provided evidence for intersubunit and intrasubunit steroid-binding sites in t
11 These maturation factors act on both the intersubunit and the solvent sides of the LSU, where the
12 ol slowed the rate of modification of L240C (intersubunit) and increased the rate of modification of
14 tive allosteric modulators by binding to the intersubunit anesthetic-binding sites in the GABAAR tran
17 genesis studies, has provided a model of the intersubunit ATP-binding sites and identified an extrace
18 imulations to demonstrate a coupling between intersubunit bending and the degree of flattening of eac
19 at changes in subunit dihedral angle lead to intersubunit bending or twist, suggesting a conserved me
20 reB filaments exhibited nucleotide-dependent intersubunit bending, with hydrolyzed polymers favoring
21 ly, the FNIII-like domain forms a continuous intersubunit beta-sheet dimer, previously unobserved for
22 nd in all apicomplexan PBGS enzymes forms an intersubunit beta-sheet, stabilizing a pro-octamer dimer
23 panded capsid are reinforced by formation of intersubunit beta-sheets with N-terminal segments of aux
24 s may have been compensated for by increased intersubunit beta-strand interactions at the icosahedral
26 ed that S-mTFD-MPPB binds to the same GABAAR intersubunit binding site as R-mTFD-MPAB, but with negat
29 otentiator, has identified a second class of intersubunit binding sites for general anesthetics in th
30 high selectivity to distinct but homologous intersubunit binding sites in the transmembrane domain o
32 on and provide a first demonstration that an intersubunit-binding site in the GABAAR transmembrane do
33 us but pharmacologically distinct classes of intersubunit-binding sites for general anesthetics in th
35 ovirus-like human endogenous retrovirus--for intersubunit bonding and found that, as in the lentiviru
36 ed us to show that antibodies binding at the intersubunit boundary inhibit uncoating of the virion ou
39 iological role in establishing the ribosomal intersubunit bridge B2a and mediating translational fide
40 the 50S subunit and disassembles the central intersubunit bridge B2a, resulting in RF2 departure.
42 t, whereas G347U is located 77 A distant, at intersubunit bridge B8, close to where EF-Tu engages the
43 wn to be necessary for mitoribosome-specific intersubunit bridge formation and 15S rRNA H44 stabiliza
44 htly coupled to its ability to form a strong intersubunit bridge linking the primary and complementar
45 NS3920, the corresponding histidine forms an intersubunit bridge that reinforces the ligand-mediated
46 ional change of rRNA helix H69, an essential intersubunit bridge, and a secondary binding site of the
47 nd Lsg1 together embrace helix 69 of the B2a intersubunit bridge, inducing base flipping that we sugg
48 alyses of the cryo-EM maps reveal that eight intersubunit bridges (bridges B1a, B1b, B2a, B2b, B3, B7
49 lude rRNA segments in contact with the tRNA, intersubunit bridges and helices 28, 32 and 34 of the sm
52 (i) the bulk transfer of energy through the intersubunit bridges from the large to the small subunit
54 work propagating motion from the tRNA to the intersubunit bridges to the head swivel or along the sam
55 ribosomal subunit protein bL31, which forms intersubunit bridges to the small ribosomal subunit, ass
56 osomal subunits remain associated through 17 intersubunit bridges, five of which are eukaryote specif
57 ere, we review the molecular nature of these intersubunit bridges, how they change conformation durin
58 tions between the ribosomal subunits, termed intersubunit bridges, keep the ribosome intact and at th
60 ably, the TnrA sensor domains insert into GS intersubunit catalytic pores, destabilizing the TnrA dim
61 odels, we investigate cholesterol binding to intersubunit cavities of the GABAAR transmembrane domain
62 tive of binding stability; the extracellular intersubunit cavity expanded and intersubunit electrosta
65 of CeFIGL-1-AAA has adapted to establish an intersubunit charge interaction, which contributes to it
68 ried ligand-binding pocket at interdomain or intersubunit clefts, facilitating proper solvent shieldi
69 sp104 hexamers adapt different mechanisms of intersubunit collaboration to disaggregate stress-induce
71 hus, the dynamic response of mTORC1 requires intersubunit communication by the Rag GTPases, providing
72 Importantly, Hsp104 variants with impaired intersubunit communication dissolve disordered aggregate
73 onvenient format for assessing mechanisms of intersubunit communication from a variety of NMR measure
80 Bacillus subtilis enzyme undergoes dramatic intersubunit conformational alterations during formation
81 ions demonstrated that IM-CKV063 binds to an intersubunit conformational epitope on domain A, a funct
82 to induce signaling in T cells via intra- or intersubunit conformational rearrangements within the ex
85 de a wealth of data on the stoichiometry and intersubunit connectivity of endogenous protein assembli
87 from crosslinking experiments identifying an intersubunit contact most consistent with that number; s
88 turn influences the formation of stabilizing intersubunit contacts and thus the reaction's degree of
89 op, which was hypothesized to make important intersubunit contacts between coat proteins in adjacent
91 t only provides further understanding of the intersubunit contacts in allosteric coupling in the HCN
94 te receptors, NMDA receptors have additional intersubunit contacts in the ligand binding domain that
98 main are critical for stabilizing intra- and intersubunit contacts that guide proper capsid assembly.
99 the AMPA receptor structure, this face forms intersubunit contacts with the transmembrane helices of
100 d by ATP hydrolysis lead to an alteration of intersubunit contacts within and across the rings, ultim
105 MR titration data reveal that there is minor intersubunit cooperativity in formation of a ternary com
107 study the mechanisms of force generation and intersubunit coordination in the ClpXP protease from E.
109 uld activate the Hsp104 hexamer by promoting intersubunit coordination, suggesting that Hsp70 is an a
114 outh of the BchL ATP-binding pocket promotes intersubunit cross stabilization of the two subunits.
121 ing is instead inhibited by oxidation of the intersubunit cysteine pair to a mixture of disulfide and
122 Venus flytraps leads to a compaction of the intersubunit dimer interface, thereby bringing the cyste
123 ron resonance (DEER) spectroscopy to measure intersubunit distance distributions in SthK, a bacterial
124 copy to measure a large number of intra- and intersubunit distances between spin labels attached to s
128 designated BG505 SOSIP.664, incorporates an intersubunit disulfide bond (SOS) to covalently link the
129 tivity is biochemically regulated through an intersubunit disulfide bond between Cys86 and Cys119 in
130 r this enzyme and reveals the presence of an intersubunit disulfide bond between Cys86 and Cys119.
131 odimers being trapped by the formation of an intersubunit disulfide bond between cysteine residues st
133 onship between dimer-decamer transitions and intersubunit disulfide bond formation is more complex th
136 es bound the enzyme in close proximity to an intersubunit disulfide bond interactions that covalently
138 gly, Y424C-G428C monomers were associated by intersubunit disulfide bonds and were insensitive to MTS
139 utant HIV-1 particles capable of spontaneous intersubunit disulfide bonds at the interhexamer interfa
141 the spatial constraints introduced by these intersubunit disulfide bonds in the outer vestibule of t
142 47, P48, and G49 to cysteine, allowing novel intersubunit disulfide bonds to form with the free C153
148 of excitatory amino acid transporter 1 form intersubunit disulfide cross-links within the trimer.
150 atoms (from R194 itself and from C95 of the intersubunit disulfide of the other protomer) and with t
151 ess and the possibility that both intra- and intersubunit dynamic binding (i.e., loss and restoration
152 hrough the single heme moiety rather than an intersubunit electron pathway through a potential domain
153 ate residue, which is believed to facilitate intersubunit electron transfer between the Rieske center
158 tracellular intersubunit cavity expanded and intersubunit electrostatic interactions involved in chan
164 indirect, or allosteric mutations affecting intersubunit geometry via indirect mechanisms are as imp
166 that the synthesis of the primer proceeds by intersubunit glucosylation of dimeric glycogenin, even t
168 and critical role for this centrally located intersubunit helix (H69) in accurate and efficient subst
169 n sites for sensory adaptation that lie near intersubunit helix interfaces of the Tsr homodimer.
171 rs at the dimer interface and enhancement of intersubunit hydrogen bonds in the presence of bt10, whi
172 tional changes that lead to disruption of an intersubunit interaction between a "hot-spot" loop in th
175 brium toward particle formation by promoting intersubunit interactions and stabilizing assembly inter
176 eucine zipper region of UL6 is important for intersubunit interactions and stable ring formation.
177 cture of the open state that has stabilizing intersubunit interactions and that is compatible with av
178 the role of residues involved in intra- and intersubunit interactions and their link with the channe
180 mechanism of the complex RbsABC2, we probed intersubunit interactions by varying the presence of the
181 s and modeling to probe these class-specific intersubunit interactions for their role in glutamate bi
182 as crystallized as a pentamer, revealing the intersubunit interactions in a wild type neuronal nAChR
183 C-linker is the site of virtually all of the intersubunit interactions in the C-terminal region.
184 Glu(42), an amino acid that participates in intersubunit interactions in the CRP pentamer and is bur
187 t phosphorylation-induced destabilization of intersubunit interactions mediated by the N-terminal dom
189 important sites of dynamic intrasubunit and intersubunit interactions that regulate assembly of the
190 g short range and long range interdomain and intersubunit interactions that uniquely regulate the act
191 s did not, suggesting the inhibitors enhance intersubunit interactions to overcome channel biogenesis
192 uggest that the tethering arm contributes to intersubunit interactions within the EGF receptor dimer.
195 ations that reduce dimerization or alter the intersubunit interface affect both the second conformati
196 emonstrated that point mutations in the EpsE intersubunit interface also reduce ATPase activity witho
197 e non-adhesive CfaB subunit localized to the intersubunit interface and significantly reduced fimbria
198 effects whether it contributed either to an intersubunit interface containing a canonical ACh bindin
199 this is due to minor differences between the intersubunit interface formed by the NTDs and the abilit
201 e inhibitors act through a unique pH-sensing intersubunit interface in GPC, but atomic-level structur
202 le open conformation in which changes at the intersubunit interface in the CTD also alter the electro
203 uces the binding of a neurotransmitter at an intersubunit interface into the opening of a central ion
204 The JMJD5-PKM2 interaction resides at the intersubunit interface region of PKM2, which hinders PKM
205 transmembrane segments of the VSDs form the intersubunit interface that mediates coupling between bi
211 lphaW493R rewires structural dynamics of the intersubunit interfaces alpha1beta and alpha2gamma.
213 mbrane-associated domains (M3 and M4) at the intersubunit interfaces form putative sites of alcohol a
216 GluClalphaR, we introduced mutations at the intersubunit interfaces where Glu (the neurotransmitter)
217 ogues) that are located at and stabilize the intersubunit interfaces, together with a single tightly
218 o equivalent Glu-binding sites at beta/alpha intersubunit interfaces, where the GluClbeta and GluClal
224 s, quantifiable manner for the heterogeneous intersubunit, intraring, noncovalent cross-links provide
225 hat the closed conformation is stabilized by intersubunit ion-ion interactions involving negative res
227 P2-binding sites in the regions close to the intersubunit junctions, suggesting that NSP2 binding cou
230 evaluation of the role of the prodomain and intersubunit linker on caspase-6 structure and function
231 s L1, L3, and L4 and in the 130s region, the intersubunit linker region, the 26-32 region as well as
233 lipid bilayers related to reorganization of intersubunit lipid binding sites demonstrate a critical
234 UGDHs where structural divergence within the intersubunit loop structure likely contributes to the Ca
240 nition by P-TEFb and reveal an unanticipated intersubunit pocket on the AFF4 SEC that potentially rep
244 with deformation of these domains as well as intersubunit rearrangements during AMPA receptor desensi
245 These results suggest that (i) the ribosomal intersubunit reorganizations upon RRF binding and subseq
246 ion, leaving the ribosome in a non-canonical intersubunit rotated state with an exposed codon in the
248 Here, we use single-molecule FRET to monitor intersubunit rotation and the inward/outward movement of
251 s long axis and orthogonal to the well-known intersubunit rotation distinguishes the posttranslocatio
252 A model is presented describing how cyclic intersubunit rotation ensures the unidirectionality of t
253 ribosomal subunit and slows down spontaneous intersubunit rotation in pretranslocation ribosomes.
254 steric interactions involved in coordinating intersubunit rotation originating from rpL10 in the core
255 gly inhibit A-site tRNA binding and ribosome intersubunit rotation that accompanies translation elong
256 iotic to predictably perturb the dynamics of intersubunit rotation, a structural rearrangement of the
257 elbow, stalk movement is directly linked to intersubunit rotation, rotation of the 30S head domain a
258 nd B4, B7a and B8 are predicted to constrain intersubunit rotation, these data provide evidence that
259 ions of the small subunit-head swiveling and intersubunit rotation-are thus coordinated via long-rang
264 olecular ratchets, involving both intra- and intersubunit rotational movements, to drive the synchron
266 translocation, characterized by intermediate intersubunit rotations, L1 stalk positions, and tRNA con
268 we identified 12 amino acid residues forming intersubunit salt bridges and 21 amino acid residues for
273 followed by the polypeptide exit tunnel, the intersubunit side, and finally the central protuberance.
274 Coexisting nucleotide states, and correlated intersubunit signaling features, coordinate rotation of
275 it via a conserved but structurally distinct intersubunit-signaling pathway common to diverse AAA+ ma
277 on of PAMs that bind selectively to a single intersubunit site in the GABA(A)R transmembrane domain,
279 demonstrated to act through a transmembrane intersubunit site situated in the upper three helical tu
280 inds to the canonical beta(3)(+)-alpha(1)(-) intersubunit site that mediates receptor activation by n
281 oth the alpha1 intrasubunit and beta3-alpha1 intersubunit sites are critical for neurosteroid action.
283 m as well as propofol bind to the homologous intersubunit sites in the GABAAR transmembrane domain th
284 el homology model suggests propofol binds to intersubunit sites in the TMD in the resting state.
285 size that binding at any of these homologous intersubunit sites is sufficient for anesthetic action a
286 yl) determines selectivity for intra- versus intersubunit sites, in contrast to GABAARs, where this d
287 l, a general anesthetic that binds to GABAAR intersubunit sites, inhibited [(3)H]S-mTFD-MPPB photolab
288 de that ML277 activates IKs by binding to an intersubunit space and allosterically influencing pore c
290 hape and position of this IRES domain in the intersubunit space compared to those of tRNA, supporting
291 MRP complex shows that FMRP binds within the intersubunit space of the ribosome such that it would pr
293 s of the IF2.tRNA sub-complex forming on the intersubunit surface of the 30S IC may play a significan
294 ilament bending and torsional rigidities and intersubunit torsional flexibility measured experimental
295 The linker length between P1 and P3 dictates intersubunit (trans) versus intrasubunit (cis) autophosp
298 ternal GXY repeats of gp12 to build a stable intersubunit triple helix in a prokaryotic setting.
300 in the GLIC TMD that frame intrasubunit and intersubunit water-accessible cavities were individually